RNA–Protein interactions for RNA: ENST00000514610.1

HMGCS1-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-207ENST00000514610 BRAT1Q6PJG6 821 aa5.07□□□□□ -1.6
HMGCS1-207ENST00000514610 CCNI2Q6ZMN8 369 aaPredicted RBP5.07□□□□□ -1.6
HMGCS1-207ENST00000514610 ZDHHC17Q8IUH5 632 aa5.07□□□□□ -1.6
HMGCS1-207ENST00000514610 SCYL3Q8IZE3 742 aa5.07□□□□□ -1.6
HMGCS1-207ENST00000514610 POC5Q8NA72 575 aa5.07□□□□□ -1.6
HMGCS1-207ENST00000514610 LRRC59Q96AG4 307 aaKnown RBP5.07□□□□□ -1.6
HMGCS1-207ENST00000514610 SLC22A18Q96BI1 424 aa5.07□□□□□ -1.6
HMGCS1-207ENST00000514610 MTBPQ96DY7 904 aa5.07□□□□□ -1.6
HMGCS1-207ENST00000514610 FEM1CQ96JP0 617 aa5.07□□□□□ -1.6
HMGCS1-207ENST00000514610 LYZL4Q96KX0 146 aa5.07□□□□□ -1.6
HMGCS1-207ENST00000514610 OR1F2PQ96R84 312 aa5.07□□□□□ -1.6
HMGCS1-207ENST00000514610 MTERF1Q99551 399 aaKnown RBP5.07□□□□□ -1.6
HMGCS1-207ENST00000514610 ZPBPQ9BS86 351 aa5.07□□□□□ -1.6
HMGCS1-207ENST00000514610 HRH4Q9H3N8 390 aa5.07□□□□□ -1.6
HMGCS1-207ENST00000514610 ANKEF1Q9NU02 776 aa5.07□□□□□ -1.6
HMGCS1-207ENST00000514610 MCM9Q9NXL9 1143 aa5.07□□□□□ -1.6
HMGCS1-207ENST00000514610 ZNF224Q9NZL3 707 aa5.07□□□□□ -1.6
HMGCS1-207ENST00000514610 UBA2Q9UBT2 640 aaPredicted RBP5.07□□□□□ -1.6
HMGCS1-207ENST00000514610 SIX4Q9UIU6 781 aa5.07□□□□□ -1.6
HMGCS1-207ENST00000514610 RPS6KA6Q9UK32 745 aa5.07□□□□□ -1.6
HMGCS1-207ENST00000514610 KCNS2Q9ULS6 477 aa5.07□□□□□ -1.6
HMGCS1-207ENST00000514610 PTRH2Q9Y3E5 179 aaKnown RBP5.07□□□□□ -1.6
HMGCS1-207ENST00000514610 PDS5AQ29RF7 1337 aaKnown RBP5.06□□□□□ -1.6
HMGCS1-207ENST00000514610 EIF4E1BA6NMX2 242 aaKnown RBP5.06□□□□□ -1.6
HMGCS1-207ENST00000514610 LACTBL1A8MY62 500 aa5.06□□□□□ -1.6
HMGCS1-207ENST00000514610 ZNF587BE7ETH6 402 aa5.06□□□□□ -1.6
HMGCS1-207ENST00000514610 GPC4O75487 556 aa5.06□□□□□ -1.6
HMGCS1-207ENST00000514610 PPP1R3DO95685 299 aa5.06□□□□□ -1.6
HMGCS1-207ENST00000514610 PMS2P2O95744 297 aa5.06□□□□□ -1.6
HMGCS1-207ENST00000514610 STARD3NLO95772 234 aa5.06□□□□□ -1.6
HMGCS1-207ENST00000514610 AKR1B1P15121 316 aa5.06□□□□□ -1.6
HMGCS1-207ENST00000514610 S1PR1P21453 382 aa5.06□□□□□ -1.6
HMGCS1-207ENST00000514610 UGT1A1P22309 533 aa5.06□□□□□ -1.6
HMGCS1-207ENST00000514610 MMP14P50281 582 aa5.06□□□□□ -1.6
HMGCS1-207ENST00000514610 IFI35P80217 286 aaPredicted RBP5.06□□□□□ -1.6
HMGCS1-207ENST00000514610 ECT2LQ008S8 904 aa5.06□□□□□ -1.6
HMGCS1-207ENST00000514610 BECN1Q14457 450 aa5.06□□□□□ -1.6
HMGCS1-207ENST00000514610 MYLK3Q32MK0 819 aa5.06□□□□□ -1.6
HMGCS1-207ENST00000514610 PAPD4Q6PIY7 484 aaKnown RBP5.06□□□□□ -1.6
HMGCS1-207ENST00000514610 RBM23Q86U06 439 aaKnown RBP5.06□□□□□ -1.6
HMGCS1-207ENST00000514610 KBTBD6Q86V97 674 aa5.06□□□□□ -1.6
HMGCS1-207ENST00000514610 ODF3L1Q8IXM7 274 aa5.06□□□□□ -1.6
HMGCS1-207ENST00000514610 NME8Q8N427 588 aa5.06□□□□□ -1.6
HMGCS1-207ENST00000514610 LILRB1Q8NHL6 650 aaPredicted RBP5.06□□□□□ -1.6
HMGCS1-207ENST00000514610 SLC44A1Q8WWI5 657 aa5.06□□□□□ -1.6
HMGCS1-207ENST00000514610 SMC6Q96SB8 1091 aa5.06□□□□□ -1.6
HMGCS1-207ENST00000514610 GFI1Q99684 422 aa5.06□□□□□ -1.6
HMGCS1-207ENST00000514610 SMARCAL1Q9NZC9 954 aa5.06□□□□□ -1.6
HMGCS1-207ENST00000514610 RABGAP1Q9Y3P9 1069 aa5.06□□□□□ -1.6
HMGCS1-207ENST00000514610 TMEM8BA6NDV4 472 aa5.05□□□□□ -1.6
HMGCS1-207ENST00000514610 A8MV72 311 aaPredicted RBP5.05□□□□□ -1.6
HMGCS1-207ENST00000514610 ANKRD28O15084 1053 aa5.05□□□□□ -1.6
HMGCS1-207ENST00000514610 ADAMDEC1O15204 470 aa5.05□□□□□ -1.6
HMGCS1-207ENST00000514610 ERAL1O75616 437 aaKnown RBP5.05□□□□□ -1.6
HMGCS1-207ENST00000514610 ZBTB11O95625 1053 aaPredicted RBP5.05□□□□□ -1.6
HMGCS1-207ENST00000514610 ZXDBP98169 803 aa5.05□□□□□ -1.6
HMGCS1-207ENST00000514610 SLC20A2Q08357 652 aa5.05□□□□□ -1.6
HMGCS1-207ENST00000514610 HNRNPA0Q13151 305 aaKnown RBP5.05□□□□□ -1.6
HMGCS1-207ENST00000514610 TNFAIP1Q13829 316 aa5.05□□□□□ -1.6
HMGCS1-207ENST00000514610 SF3B4Q15427 424 aaKnown RBP eCLIP5.05□□□□□ -1.6
HMGCS1-207ENST00000514610 KRTCAP3Q53RY4 240 aa5.05□□□□□ -1.6
HMGCS1-207ENST00000514610 KRBA2Q6ZNG9 492 aa5.05□□□□□ -1.6
HMGCS1-207ENST00000514610 CREB3L2Q70SY1 520 aa5.05□□□□□ -1.6
HMGCS1-207ENST00000514610 GALNT5Q7Z7M9 940 aa5.05□□□□□ -1.6
HMGCS1-207ENST00000514610 CCDC190Q86UF4 302 aa5.05□□□□□ -1.6
HMGCS1-207ENST00000514610 SATL1Q86VE3 508 aa5.05□□□□□ -1.6
HMGCS1-207ENST00000514610 C1orf87Q8N0U7 546 aa5.05□□□□□ -1.6
HMGCS1-207ENST00000514610 SLC20A1Q8WUM9 679 aa5.05□□□□□ -1.6
HMGCS1-207ENST00000514610 ABTB1Q969K4 478 aaPredicted RBP5.05□□□□□ -1.6
HMGCS1-207ENST00000514610 MARK4Q96L34 752 aa5.05□□□□□ -1.6
HMGCS1-207ENST00000514610 PAFAH2Q99487 392 aa5.05□□□□□ -1.6
HMGCS1-207ENST00000514610 C1QTNF1Q9BXJ1 281 aa5.05□□□□□ -1.6
HMGCS1-207ENST00000514610 HIPK2Q9H2X6 1198 aa5.05□□□□□ -1.6
HMGCS1-207ENST00000514610 CLIC5Q9NZA1 410 aa5.05□□□□□ -1.6
HMGCS1-207ENST00000514610 CHORDC1Q9UHD1 332 aaPredicted RBP5.05□□□□□ -1.6
HMGCS1-207ENST00000514610 FBXL2Q9UKC9 423 aa5.05□□□□□ -1.6
HMGCS1-207ENST00000514610 PLAGL1Q9UM63 463 aa5.05□□□□□ -1.6
HMGCS1-207ENST00000514610 EXO1Q9UQ84 846 aaKnown RBP5.05□□□□□ -1.6
HMGCS1-207ENST00000514610 B3GALT5Q9Y2C3 310 aa5.05□□□□□ -1.6
HMGCS1-207ENST00000514610 KLHL20Q9Y2M5 609 aa5.05□□□□□ -1.6
HMGCS1-207ENST00000514610 TMEM184BQ9Y519 407 aaPredicted RBP5.05□□□□□ -1.6
HMGCS1-207ENST00000514610 TRIP12Q14669 1992 aaPredicted RBP5.04□□□□□ -1.6
HMGCS1-207ENST00000514610 A0A1W2PP11 408 aa5.04□□□□□ -1.6
HMGCS1-207ENST00000514610 PROB1E7EW31 1015 aa5.04□□□□□ -1.6
HMGCS1-207ENST00000514610 HS3ST1O14792 307 aa5.04□□□□□ -1.6
HMGCS1-207ENST00000514610 KCNN4O15554 427 aa5.04□□□□□ -1.6
HMGCS1-207ENST00000514610 FIBPO43427 364 aa5.04□□□□□ -1.6
HMGCS1-207ENST00000514610 ADAM20O43506 726 aa5.04□□□□□ -1.6
HMGCS1-207ENST00000514610 SLC28A2O43868 658 aa5.04□□□□□ -1.6
HMGCS1-207ENST00000514610 TMCC2O75069 709 aa5.04□□□□□ -1.6
HMGCS1-207ENST00000514610 PAPSS2O95340 614 aaPredicted RBP5.04□□□□□ -1.6
HMGCS1-207ENST00000514610 ADRB2P07550 413 aa5.04□□□□□ -1.6
HMGCS1-207ENST00000514610 HRH2P25021 359 aa5.04□□□□□ -1.6
HMGCS1-207ENST00000514610 PEX5P50542 639 aa5.04□□□□□ -1.6
HMGCS1-207ENST00000514610 HSD17B4P51659 736 aa5.04□□□□□ -1.6
HMGCS1-207ENST00000514610 PNLIPRP2P54317 469 aa5.04□□□□□ -1.6
HMGCS1-207ENST00000514610 RUNX1T1Q06455 604 aa5.04□□□□□ -1.6
HMGCS1-207ENST00000514610 KCNC3Q14003 757 aa5.04□□□□□ -1.6
HMGCS1-207ENST00000514610 KCTD2Q14681 263 aa5.04□□□□□ -1.6
HMGCS1-207ENST00000514610 PDXDC1Q6P996 788 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms