RNA–Protein interactions for RNA: ENST00000513984.5

VCAN-211, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-211ENST00000513984 MAELQ96JY0 434 aaKnown RBP14.83□□□□□ -0.04
VCAN-211ENST00000513984 TTC1Q99614 292 aa14.83□□□□□ -0.04
VCAN-211ENST00000513984 NUF2Q9BZD4 464 aa14.83□□□□□ -0.04
VCAN-211ENST00000513984 LMAN2LQ9H0V9 348 aa14.83□□□□□ -0.04
VCAN-211ENST00000513984 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.83□□□□□ -0.04
VCAN-211ENST00000513984 DUS2Q9NX74 493 aaKnown RBP14.83□□□□□ -0.04
VCAN-211ENST00000513984 GTSE1Q9NYZ3 720 aa14.83□□□□□ -0.04
VCAN-211ENST00000513984 IKZF3Q9UKT9 509 aa14.83□□□□□ -0.04
VCAN-211ENST00000513984 CDYLQ9Y232 598 aa14.83□□□□□ -0.04
VCAN-211ENST00000513984 DOCK8Q8NF50 2099 aa14.83□□□□□ -0.04
VCAN-211ENST00000513984 COL4A3Q01955 1670 aa14.83□□□□□ -0.04
VCAN-211ENST00000513984 TRPC5OSA6NMA1 111 aa14.82□□□□□ -0.04
VCAN-211ENST00000513984 GOLGA8CPA6NN73 597 aa14.82□□□□□ -0.04
VCAN-211ENST00000513984 SYCE1LA8MT33 242 aa14.82□□□□□ -0.04
VCAN-211ENST00000513984 E5RI56 91 aa14.82□□□□□ -0.04
VCAN-211ENST00000513984 E9PBE3 544 aa14.82□□□□□ -0.04
VCAN-211ENST00000513984 SPECC1L-ADORA2AF8WAN1 911 aa14.82□□□□□ -0.04
VCAN-211ENST00000513984 GSC2O15499 205 aa14.82□□□□□ -0.04
VCAN-211ENST00000513984 KLHL41O60662 606 aa14.82□□□□□ -0.04
VCAN-211ENST00000513984 JUNP05412 331 aaKnown RBP14.82□□□□□ -0.04
VCAN-211ENST00000513984 CISD3P0C7P0 127 aa14.82□□□□□ -0.04
VCAN-211ENST00000513984 NCF2P19878 526 aaPredicted RBP14.82□□□□□ -0.04
VCAN-211ENST00000513984 LHCGRP22888 699 aa14.82□□□□□ -0.04
VCAN-211ENST00000513984 ACRV1P26436 265 aa14.82□□□□□ -0.04
VCAN-211ENST00000513984 CA5AP35218 305 aa14.82□□□□□ -0.04
VCAN-211ENST00000513984 RECQLP46063 649 aaPredicted RBP14.82□□□□□ -0.04
VCAN-211ENST00000513984 NRIP1P48552 1158 aa14.82□□□□□ -0.04
VCAN-211ENST00000513984 IL2P60568 153 aa14.82□□□□□ -0.04
VCAN-211ENST00000513984 SATB1Q01826 763 aa14.82□□□□□ -0.04
VCAN-211ENST00000513984 TSNQ15631 228 aaKnown RBP14.82□□□□□ -0.04
VCAN-211ENST00000513984 SNCBQ16143 134 aa14.82□□□□□ -0.04
VCAN-211ENST00000513984 LSM12Q3MHD2 195 aaKnown RBP14.82□□□□□ -0.04
VCAN-211ENST00000513984 GDPD4Q6W3E5 623 aa14.82□□□□□ -0.04
VCAN-211ENST00000513984 ACAD11Q709F0 780 aa14.82□□□□□ -0.04
VCAN-211ENST00000513984 TMPRSS6Q8IU80 811 aa14.82□□□□□ -0.04
VCAN-211ENST00000513984 AFAP1L2Q8N4X5 818 aa14.82□□□□□ -0.04
VCAN-211ENST00000513984 PTGR2Q8N8N7 351 aaPredicted RBP14.82□□□□□ -0.04
VCAN-211ENST00000513984 WFIKKN2Q8TEU8 576 aa14.82□□□□□ -0.04
VCAN-211ENST00000513984 EXT2Q93063 718 aa14.82□□□□□ -0.04
VCAN-211ENST00000513984 FUBP1Q96AE4 644 aaKnown RBP14.82□□□□□ -0.04
VCAN-211ENST00000513984 CLPBQ9H078 707 aa14.82□□□□□ -0.04
VCAN-211ENST00000513984 C1orf21Q9H246 121 aa14.82□□□□□ -0.04
VCAN-211ENST00000513984 WDR55Q9H6Y2 383 aaPredicted RBP14.82□□□□□ -0.04
VCAN-211ENST00000513984 GNPTGQ9UJJ9 305 aa14.82□□□□□ -0.04
VCAN-211ENST00000513984 RNF112Q9ULX5 631 aa14.82□□□□□ -0.04
VCAN-211ENST00000513984 DHRS7Q9Y394 339 aa14.82□□□□□ -0.04
VCAN-211ENST00000513984 TCF20Q9UGU0 1960 aaKnown RBP14.82□□□□□ -0.04
VCAN-211ENST00000513984 GOLGA8QA0A0J9YX86 632 aa14.82□□□□□ -0.04
VCAN-211ENST00000513984 GOLGA8OA6NCC3 632 aa14.82□□□□□ -0.04
VCAN-211ENST00000513984 A8MUI8 341 aa14.82□□□□□ -0.04
VCAN-211ENST00000513984 B2RBV5 119 aa14.82□□□□□ -0.04
VCAN-211ENST00000513984 TMEM233B4DJY2 109 aa14.82□□□□□ -0.04
VCAN-211ENST00000513984 GOLGA8NF8WBI6 632 aa14.82□□□□□ -0.04
VCAN-211ENST00000513984 KLK8O60259 260 aa14.82□□□□□ -0.04
VCAN-211ENST00000513984 SUPT7LO94864 414 aa14.82□□□□□ -0.04
VCAN-211ENST00000513984 ADH1CP00326 375 aa14.82□□□□□ -0.04
VCAN-211ENST00000513984 CHRM1P11229 460 aaPredicted RBP14.82□□□□□ -0.04
VCAN-211ENST00000513984 CHRM3P20309 590 aa14.82□□□□□ -0.04
VCAN-211ENST00000513984 EPHA3P29320 983 aa14.82□□□□□ -0.04
VCAN-211ENST00000513984 PRDX6P30041 224 aa14.82□□□□□ -0.04
VCAN-211ENST00000513984 CPA2P48052 419 aa14.82□□□□□ -0.04
VCAN-211ENST00000513984 DGKGP49619 791 aa14.82□□□□□ -0.04
VCAN-211ENST00000513984 KDSRQ06136 332 aa14.82□□□□□ -0.04
VCAN-211ENST00000513984 CHRNA6Q15825 494 aa14.82□□□□□ -0.04
VCAN-211ENST00000513984 PDCD2Q16342 344 aaPredicted RBP14.82□□□□□ -0.04
VCAN-211ENST00000513984 TCEAL5Q5H9L2 206 aa14.82□□□□□ -0.04
VCAN-211ENST00000513984 BRAT1Q6PJG6 821 aa14.82□□□□□ -0.04
VCAN-211ENST00000513984 RPS27LQ71UM5 84 aaKnown RBP14.82□□□□□ -0.04
VCAN-211ENST00000513984 RAB44Q7Z6P3 723 aaPredicted RBP14.82□□□□□ -0.04
VCAN-211ENST00000513984 NPAS3Q8IXF0 933 aa14.82□□□□□ -0.04
VCAN-211ENST00000513984 GPR26Q8NDV2 337 aa14.82□□□□□ -0.04
VCAN-211ENST00000513984 FAM13CQ8NE31 585 aa14.82□□□□□ -0.04
VCAN-211ENST00000513984 VN1R2Q8NFZ6 395 aa14.82□□□□□ -0.04
VCAN-211ENST00000513984 MYLIPQ8WY64 445 aa14.82□□□□□ -0.04
VCAN-211ENST00000513984 PDLIM5Q96HC4 596 aaKnown RBP14.82□□□□□ -0.04
VCAN-211ENST00000513984 ASB2Q96Q27 587 aa14.82□□□□□ -0.04
VCAN-211ENST00000513984 HEPHQ9BQS7 1158 aa14.82□□□□□ -0.04
VCAN-211ENST00000513984 OSBPL1AQ9BXW6 950 aa14.82□□□□□ -0.04
VCAN-211ENST00000513984 MMADHCQ9H3L0 296 aaPredicted RBP14.82□□□□□ -0.04
VCAN-211ENST00000513984 BRD9Q9H8M2 597 aa14.82□□□□□ -0.04
VCAN-211ENST00000513984 CERS4Q9HA82 394 aa14.82□□□□□ -0.04
VCAN-211ENST00000513984 TNFRSF12AQ9NP84 129 aa14.82□□□□□ -0.04
VCAN-211ENST00000513984 SLC27A6Q9Y2P4 619 aa14.82□□□□□ -0.04
VCAN-211ENST00000513984 WASF2Q9Y6W5 498 aa14.82□□□□□ -0.04
VCAN-211ENST00000513984 TSPAN11A1L157 253 aa14.81□□□□□ -0.04
VCAN-211ENST00000513984 NPEPPSL1A6NEC2 478 aa14.81□□□□□ -0.04
VCAN-211ENST00000513984 A8MX80 341 aa14.81□□□□□ -0.04
VCAN-211ENST00000513984 CDC7O00311 574 aa14.81□□□□□ -0.04
VCAN-211ENST00000513984 SDHDO14521 159 aa14.81□□□□□ -0.04
VCAN-211ENST00000513984 NEMP1O14524 444 aa14.81□□□□□ -0.04
VCAN-211ENST00000513984 ECI2O75521 394 aa14.81□□□□□ -0.04
VCAN-211ENST00000513984 WFS1O76024 890 aa14.81□□□□□ -0.04
VCAN-211ENST00000513984 ASLP04424 464 aa14.81□□□□□ -0.04
VCAN-211ENST00000513984 SRPRAP08240 638 aaKnown RBP14.81□□□□□ -0.04
VCAN-211ENST00000513984 NNMTP40261 264 aa14.81□□□□□ -0.04
VCAN-211ENST00000513984 PBX2P40425 430 aa14.81□□□□□ -0.04
VCAN-211ENST00000513984 VIPR2P41587 438 aa14.81□□□□□ -0.04
VCAN-211ENST00000513984 POLR2LP62875 67 aaKnown RBP14.81□□□□□ -0.04
VCAN-211ENST00000513984 PTSQ03393 145 aa14.81□□□□□ -0.04
VCAN-211ENST00000513984 PFKFB4Q16877 469 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms