RNA–Protein interactions for RNA: ENST00000513318.1

HMGXB3-204, Transcript of HMG-box containing 3, humanhuman

TSL 3

Gene HMGXB3, Length 749 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-204ENST00000513318 CDK3Q00526 305 aa7.53□□□□□ -1.2
HMGXB3-204ENST00000513318 NFATC2Q13469 925 aa7.53□□□□□ -1.2
HMGXB3-204ENST00000513318 PEX6Q13608 980 aa7.53□□□□□ -1.2
HMGXB3-204ENST00000513318 PTK2BQ14289 1009 aa7.53□□□□□ -1.2
HMGXB3-204ENST00000513318 INPP5AQ14642 412 aa7.53□□□□□ -1.2
HMGXB3-204ENST00000513318 TRADDQ15628 312 aa7.53□□□□□ -1.2
HMGXB3-204ENST00000513318 ATP13A5Q4VNC0 1218 aa7.53□□□□□ -1.2
HMGXB3-204ENST00000513318 SPANXN3Q5MJ09 141 aa7.53□□□□□ -1.2
HMGXB3-204ENST00000513318 SLC23A3Q6PIS1 610 aa7.53□□□□□ -1.2
HMGXB3-204ENST00000513318 AFTPHQ6ULP2 937 aa7.53□□□□□ -1.2
HMGXB3-204ENST00000513318 ADAMTSL4Q6UY14 1074 aa7.53□□□□□ -1.2
HMGXB3-204ENST00000513318 MACC1Q6ZN28 852 aa7.53□□□□□ -1.2
HMGXB3-204ENST00000513318 SNX20Q7Z614 316 aa7.53□□□□□ -1.2
HMGXB3-204ENST00000513318 DCP2Q8IU60 420 aaKnown RBP7.53□□□□□ -1.2
HMGXB3-204ENST00000513318 PHYKPLQ8IUZ5 450 aa7.53□□□□□ -1.2
HMGXB3-204ENST00000513318 ZBED8Q8IZ13 594 aa7.53□□□□□ -1.2
HMGXB3-204ENST00000513318 PELI3Q8N2H9 469 aa7.53□□□□□ -1.2
HMGXB3-204ENST00000513318 AGGF1Q8N302 714 aaeCLIP7.53□□□□□ -1.2
HMGXB3-204ENST00000513318 GPR161Q8N6U8 529 aaKnown RBP7.53□□□□□ -1.2
HMGXB3-204ENST00000513318 EIF1ADQ8N9N8 165 aaKnown RBP7.53□□□□□ -1.2
HMGXB3-204ENST00000513318 PLA2G15Q8NCC3 412 aa7.53□□□□□ -1.2
HMGXB3-204ENST00000513318 OR13H1Q8NG92 308 aa7.53□□□□□ -1.2
HMGXB3-204ENST00000513318 UBXN4Q92575 508 aa7.53□□□□□ -1.2
HMGXB3-204ENST00000513318 ULK4Q96C45 1275 aa7.53□□□□□ -1.2
HMGXB3-204ENST00000513318 MFSD3Q96ES6 412 aa7.53□□□□□ -1.2
HMGXB3-204ENST00000513318 KLHDC7BQ96G42 594 aa7.53□□□□□ -1.2
HMGXB3-204ENST00000513318 SGSM3Q96HU1 749 aa7.53□□□□□ -1.2
HMGXB3-204ENST00000513318 BMFQ96LC9 184 aa7.53□□□□□ -1.2
HMGXB3-204ENST00000513318 TBATAQ96M53 351 aa7.53□□□□□ -1.2
HMGXB3-204ENST00000513318 AGAP2Q99490 1192 aa7.53□□□□□ -1.2
HMGXB3-204ENST00000513318 EBNA1BP2Q99848 306 aaKnown RBP7.53□□□□□ -1.2
HMGXB3-204ENST00000513318 HINFPQ9BQA5 517 aa7.53□□□□□ -1.2
HMGXB3-204ENST00000513318 APOOQ9BUR5 198 aa7.53□□□□□ -1.2
HMGXB3-204ENST00000513318 TEX101Q9BY14 249 aa7.53□□□□□ -1.2
HMGXB3-204ENST00000513318 ARRDC1-AS1Q9H2J1 176 aa7.53□□□□□ -1.2
HMGXB3-204ENST00000513318 ASB8Q9H765 288 aa7.53□□□□□ -1.2
HMGXB3-204ENST00000513318 SAYSD1Q9NPB0 183 aa7.53□□□□□ -1.2
HMGXB3-204ENST00000513318 IL26Q9NPH9 171 aa7.53□□□□□ -1.2
HMGXB3-204ENST00000513318 RRAGDQ9NQL2 400 aaPredicted RBP7.53□□□□□ -1.2
HMGXB3-204ENST00000513318 SMOXQ9NWM0 555 aa7.53□□□□□ -1.2
HMGXB3-204ENST00000513318 NCDNQ9UBB6 729 aa7.53□□□□□ -1.2
HMGXB3-204ENST00000513318 ZC3H7BQ9UGR2 993 aaKnown RBP7.53□□□□□ -1.2
HMGXB3-204ENST00000513318 CRLS1Q9UJA2 301 aa7.53□□□□□ -1.2
HMGXB3-204ENST00000513318 CHMP2BQ9UQN3 213 aa7.53□□□□□ -1.2
HMGXB3-204ENST00000513318 CA5BQ9Y2D0 317 aa7.53□□□□□ -1.2
HMGXB3-204ENST00000513318 FNDC3AQ9Y2H6 1198 aaKnown RBP7.53□□□□□ -1.2
HMGXB3-204ENST00000513318 COL5A1P20908 1838 aaPredicted RBP7.52□□□□□ -1.2
HMGXB3-204ENST00000513318 EP300Q09472 2414 aaPredicted RBP7.52□□□□□ -1.2
HMGXB3-204ENST00000513318 RP1P56715 2156 aa7.52□□□□□ -1.21
HMGXB3-204ENST00000513318 TRBV5-4A0A0C4DH59 114 aa7.52□□□□□ -1.21
HMGXB3-204ENST00000513318 ZCWPW2A0A1B0GU75 182 aa7.52□□□□□ -1.21
HMGXB3-204ENST00000513318 CCDC162PA2VCL2 907 aa7.52□□□□□ -1.21
HMGXB3-204ENST00000513318 TLR4O00206 839 aa7.52□□□□□ -1.21
HMGXB3-204ENST00000513318 CCL22O00626 93 aa7.52□□□□□ -1.21
HMGXB3-204ENST00000513318 GOT2P00505 430 aaKnown RBP7.52□□□□□ -1.21
HMGXB3-204ENST00000513318 WNT1P04628 370 aa7.52□□□□□ -1.21
HMGXB3-204ENST00000513318 CFIP05156 583 aa7.52□□□□□ -1.21
HMGXB3-204ENST00000513318 MCM3P25205 808 aa7.52□□□□□ -1.21
HMGXB3-204ENST00000513318 ARNTP27540 789 aa7.52□□□□□ -1.21
HMGXB3-204ENST00000513318 ECHS1P30084 290 aa7.52□□□□□ -1.21
HMGXB3-204ENST00000513318 FOXN2P32314 431 aa7.52□□□□□ -1.21
HMGXB3-204ENST00000513318 PPARGP37231 505 aaPredicted RBP7.52□□□□□ -1.21
HMGXB3-204ENST00000513318 CARSP49589 748 aaKnown RBP7.52□□□□□ -1.21
HMGXB3-204ENST00000513318 CSNK1EP49674 416 aaKnown RBP7.52□□□□□ -1.21
HMGXB3-204ENST00000513318 C21orf59P57076 290 aa7.52□□□□□ -1.21
HMGXB3-204ENST00000513318 NHLH1Q02575 133 aa7.52□□□□□ -1.21
HMGXB3-204ENST00000513318 CACNG1Q06432 222 aa7.52□□□□□ -1.21
HMGXB3-204ENST00000513318 PDE1CQ14123 709 aaPredicted RBP7.52□□□□□ -1.21
HMGXB3-204ENST00000513318 CRYMQ14894 314 aa7.52□□□□□ -1.21
HMGXB3-204ENST00000513318 NFATC4Q14934 902 aa7.52□□□□□ -1.21
HMGXB3-204ENST00000513318 FASTKD3Q14CZ7 662 aaKnown RBP7.52□□□□□ -1.21
HMGXB3-204ENST00000513318 CHRNA6Q15825 494 aa7.52□□□□□ -1.21
HMGXB3-204ENST00000513318 LONRF1Q17RB8 773 aa7.52□□□□□ -1.21
HMGXB3-204ENST00000513318 GPR33Q49SQ1 333 aa7.52□□□□□ -1.21
HMGXB3-204ENST00000513318 ANKRD20A4Q4UJ75 823 aa7.52□□□□□ -1.21
HMGXB3-204ENST00000513318 TRIM61Q5EBN2 209 aa7.52□□□□□ -1.21
HMGXB3-204ENST00000513318 ZRANB3Q5FWF4 1079 aa7.52□□□□□ -1.21
HMGXB3-204ENST00000513318 AARS2Q5JTZ9 985 aaKnown RBP7.52□□□□□ -1.21
HMGXB3-204ENST00000513318 LDLRAP1Q5SW96 308 aa7.52□□□□□ -1.21
HMGXB3-204ENST00000513318 STEAP4Q687X5 459 aa7.52□□□□□ -1.21
HMGXB3-204ENST00000513318 CES3Q6UWW8 571 aa7.52□□□□□ -1.21
HMGXB3-204ENST00000513318 LAYNQ6UX15 382 aa7.52□□□□□ -1.21
HMGXB3-204ENST00000513318 Q6ZSR6 202 aa7.52□□□□□ -1.21
HMGXB3-204ENST00000513318 PARGQ86W56 976 aa7.52□□□□□ -1.21
HMGXB3-204ENST00000513318 CCDC25Q86WR0 208 aa7.52□□□□□ -1.21
HMGXB3-204ENST00000513318 LMNTD2Q8IXW0 634 aa7.52□□□□□ -1.21
HMGXB3-204ENST00000513318 SLC22A18ASQ8N1D0 253 aa7.52□□□□□ -1.21
HMGXB3-204ENST00000513318 OXR1Q8N573 874 aa7.52□□□□□ -1.21
HMGXB3-204ENST00000513318 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.52□□□□□ -1.21
HMGXB3-204ENST00000513318 FBXO36Q8NEA4 188 aa7.52□□□□□ -1.21
HMGXB3-204ENST00000513318 DDHD1Q8NEL9 900 aa7.52□□□□□ -1.21
HMGXB3-204ENST00000513318 OR6P1Q8NGX9 317 aa7.52□□□□□ -1.21
HMGXB3-204ENST00000513318 OR4L1Q8NH43 312 aa7.52□□□□□ -1.21
HMGXB3-204ENST00000513318 GABPB2Q8TAK5 448 aaPredicted RBP7.52□□□□□ -1.21
HMGXB3-204ENST00000513318 GSDMBQ8TAX9 411 aa7.52□□□□□ -1.21
HMGXB3-204ENST00000513318 ZNF398Q8TD17 642 aa7.52□□□□□ -1.21
HMGXB3-204ENST00000513318 PYROXD1Q8WU10 500 aa7.52□□□□□ -1.21
HMGXB3-204ENST00000513318 BTN2A2Q8WVV5 523 aa7.52□□□□□ -1.21
HMGXB3-204ENST00000513318 IFT81Q8WYA0 676 aa7.52□□□□□ -1.21
HMGXB3-204ENST00000513318 GLYATL1Q969I3 302 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms