RNA–Protein interactions for RNA: ENST00000511676.5

NR1I3-228, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-228ENST00000511676 N4BP2L1Q5TBK1 243 aaPredicted RBP9.06□□□□□ -0.96
NR1I3-228ENST00000511676 MROH9Q5TGP6 573 aa9.06□□□□□ -0.96
NR1I3-228ENST00000511676 TXNDC11Q6PKC3 985 aa9.06□□□□□ -0.96
NR1I3-228ENST00000511676 Q6ZS52 159 aa9.06□□□□□ -0.96
NR1I3-228ENST00000511676 ZNF765Q7L2R6 523 aa9.06□□□□□ -0.96
NR1I3-228ENST00000511676 LYSMD3Q7Z3D4 306 aa9.06□□□□□ -0.96
NR1I3-228ENST00000511676 CLEC14AQ86T13 490 aa9.06□□□□□ -0.96
NR1I3-228ENST00000511676 SYT12Q8IV01 421 aa9.06□□□□□ -0.96
NR1I3-228ENST00000511676 NRSN1Q8IZ57 195 aa9.06□□□□□ -0.96
NR1I3-228ENST00000511676 CHST14Q8NCH0 376 aa9.06□□□□□ -0.96
NR1I3-228ENST00000511676 OR13C4Q8NGS5 318 aa9.06□□□□□ -0.96
NR1I3-228ENST00000511676 OR6K2Q8NGY2 324 aa9.06□□□□□ -0.96
NR1I3-228ENST00000511676 RDH11Q8TC12 318 aa9.06□□□□□ -0.96
NR1I3-228ENST00000511676 CYB5D2Q8WUJ1 264 aa9.06□□□□□ -0.96
NR1I3-228ENST00000511676 HEXDCQ8WVB3 486 aa9.06□□□□□ -0.96
NR1I3-228ENST00000511676 CKAP2Q8WWK9 683 aa9.06□□□□□ -0.96
NR1I3-228ENST00000511676 FOXJ1Q92949 421 aa9.06□□□□□ -0.96
NR1I3-228ENST00000511676 ULK4Q96C45 1275 aa9.06□□□□□ -0.96
NR1I3-228ENST00000511676 CHFRQ96EP1 664 aa9.06□□□□□ -0.96
NR1I3-228ENST00000511676 SERAC1Q96JX3 654 aa9.06□□□□□ -0.96
NR1I3-228ENST00000511676 HDAC8Q9BY41 377 aa9.06□□□□□ -0.96
NR1I3-228ENST00000511676 UGT1A7Q9HAW7 530 aa9.06□□□□□ -0.96
NR1I3-228ENST00000511676 UGT1A10Q9HAW8 530 aa9.06□□□□□ -0.96
NR1I3-228ENST00000511676 UGT1A8Q9HAW9 530 aa9.06□□□□□ -0.96
NR1I3-228ENST00000511676 KCNK9Q9NPC2 374 aa9.06□□□□□ -0.96
NR1I3-228ENST00000511676 SNX15Q9NRS6 342 aa9.06□□□□□ -0.96
NR1I3-228ENST00000511676 PKD2L2Q9NZM6 624 aa9.06□□□□□ -0.96
NR1I3-228ENST00000511676 TLK1Q9UKI8 766 aa9.06□□□□□ -0.96
NR1I3-228ENST00000511676 PPM1HQ9ULR3 514 aa9.06□□□□□ -0.96
NR1I3-228ENST00000511676 MMP17Q9ULZ9 603 aa9.06□□□□□ -0.96
NR1I3-228ENST00000511676 SCML1Q9UN30 329 aa9.06□□□□□ -0.96
NR1I3-228ENST00000511676 PLLPQ9Y342 182 aa9.06□□□□□ -0.96
NR1I3-228ENST00000511676 PCDHB1Q9Y5F3 818 aa9.06□□□□□ -0.96
NR1I3-228ENST00000511676 SLC30A1Q9Y6M5 507 aa9.06□□□□□ -0.96
NR1I3-228ENST00000511676 ACACBO00763 2458 aa9.06□□□□□ -0.96
NR1I3-228ENST00000511676 DMXL1Q9Y485 3027 aa9.05□□□□□ -0.96
NR1I3-228ENST00000511676 ZNF106Q9H2Y7 1883 aaKnown RBP9.05□□□□□ -0.96
NR1I3-228ENST00000511676 FAM95CA0A1B0GW59 222 aa9.05□□□□□ -0.96
NR1I3-228ENST00000511676 NPIPB15A6NHN6 443 aaPredicted RBP9.05□□□□□ -0.96
NR1I3-228ENST00000511676 C16orf96A6NNT2 1141 aa9.05□□□□□ -0.96
NR1I3-228ENST00000511676 TPP1O14773 563 aa9.05□□□□□ -0.96
NR1I3-228ENST00000511676 AP1G1O43747 822 aa9.05□□□□□ -0.96
NR1I3-228ENST00000511676 RNASEH1O60930 286 aaKnown RBP9.05□□□□□ -0.96
NR1I3-228ENST00000511676 SNUPNO95149 360 aaKnown RBP9.05□□□□□ -0.96
NR1I3-228ENST00000511676 IL1BP01584 269 aa9.05□□□□□ -0.96
NR1I3-228ENST00000511676 GABRB3P28472 473 aa9.05□□□□□ -0.96
NR1I3-228ENST00000511676 SLC8A1P32418 973 aa9.05□□□□□ -0.96
NR1I3-228ENST00000511676 SKIV2L2P42285 1042 aaKnown RBP9.05□□□□□ -0.96
NR1I3-228ENST00000511676 ABL2P42684 1182 aa9.05□□□□□ -0.96
NR1I3-228ENST00000511676 KIR2DL1P43626 348 aaPredicted RBP9.05□□□□□ -0.96
NR1I3-228ENST00000511676 ATP1A2P50993 1020 aa9.05□□□□□ -0.96
NR1I3-228ENST00000511676 PRKAA2P54646 552 aa9.05□□□□□ -0.96
NR1I3-228ENST00000511676 RAB10P61026 200 aa9.05□□□□□ -0.96
NR1I3-228ENST00000511676 GNGT1P63211 74 aa9.05□□□□□ -0.96
NR1I3-228ENST00000511676 ZBTB16Q05516 673 aa9.05□□□□□ -0.96
NR1I3-228ENST00000511676 SFSWAPQ12872 951 aaKnown RBP9.05□□□□□ -0.96
NR1I3-228ENST00000511676 NFATC2Q13469 925 aa9.05□□□□□ -0.96
NR1I3-228ENST00000511676 PDE1CQ14123 709 aaPredicted RBP9.05□□□□□ -0.96
NR1I3-228ENST00000511676 ARHGEF7Q14155 803 aa9.05□□□□□ -0.96
NR1I3-228ENST00000511676 USP10Q14694 798 aaKnown RBP9.05□□□□□ -0.96
NR1I3-228ENST00000511676 HHATQ5VTY9 493 aa9.05□□□□□ -0.96
NR1I3-228ENST00000511676 PMS2CLQ68D20 193 aa9.05□□□□□ -0.96
NR1I3-228ENST00000511676 PSAPL1Q6NUJ1 521 aa9.05□□□□□ -0.96
NR1I3-228ENST00000511676 CRTC1Q6UUV9 634 aa9.05□□□□□ -0.96
NR1I3-228ENST00000511676 SNX20Q7Z614 316 aa9.05□□□□□ -0.96
NR1I3-228ENST00000511676 NLRP8Q86W28 1048 aa9.05□□□□□ -0.96
NR1I3-228ENST00000511676 ZSWIM9Q86XI8 627 aa9.05□□□□□ -0.96
NR1I3-228ENST00000511676 DENND6AQ8IWF6 608 aa9.05□□□□□ -0.96
NR1I3-228ENST00000511676 C4orf33Q8N1A6 199 aa9.05□□□□□ -0.96
NR1I3-228ENST00000511676 PGBD3Q8N328 593 aa9.05□□□□□ -0.96
NR1I3-228ENST00000511676 KDF1Q8NAX2 398 aaPredicted RBP9.05□□□□□ -0.96
NR1I3-228ENST00000511676 TTC8Q8TAM2 541 aa9.05□□□□□ -0.96
NR1I3-228ENST00000511676 DYDC1Q8WWB3 177 aa9.05□□□□□ -0.96
NR1I3-228ENST00000511676 SORCS1Q8WY21 1168 aa9.05□□□□□ -0.96
NR1I3-228ENST00000511676 LPGAT1Q92604 370 aa9.05□□□□□ -0.96
NR1I3-228ENST00000511676 KCNJ9Q92806 393 aa9.05□□□□□ -0.96
NR1I3-228ENST00000511676 FAM131CQ96AQ9 280 aa9.05□□□□□ -0.96
NR1I3-228ENST00000511676 MRRFQ96E11 262 aaKnown RBP9.05□□□□□ -0.96
NR1I3-228ENST00000511676 MAGEB18Q96M61 343 aa9.05□□□□□ -0.96
NR1I3-228ENST00000511676 TSNARE1Q96NA8 513 aa9.05□□□□□ -0.96
NR1I3-228ENST00000511676 KLHL32Q96NJ5 620 aa9.05□□□□□ -0.96
NR1I3-228ENST00000511676 GABRG3Q99928 467 aa9.05□□□□□ -0.96
NR1I3-228ENST00000511676 DUSP15Q9H1R2 295 aaPredicted RBP9.05□□□□□ -0.96
NR1I3-228ENST00000511676 EPN3Q9H201 632 aa9.05□□□□□ -0.96
NR1I3-228ENST00000511676 DYRK4Q9NR20 520 aa9.05□□□□□ -0.96
NR1I3-228ENST00000511676 KLHL42Q9P2K6 505 aa9.05□□□□□ -0.96
NR1I3-228ENST00000511676 KCTD3Q9Y597 815 aa9.05□□□□□ -0.96
NR1I3-228ENST00000511676 WDR87Q6ZQQ6 2873 aa9.05□□□□□ -0.96
NR1I3-228ENST00000511676 GPR179Q6PRD1 2367 aa9.05□□□□□ -0.96
NR1I3-228ENST00000511676 FRYLO94915 3013 aa9.05□□□□□ -0.96
NR1I3-228ENST00000511676 TICRRQ7Z2Z1 1910 aa9.04□□□□□ -0.96
NR1I3-228ENST00000511676 IGLV3-16A0A075B6K0 115 aa9.04□□□□□ -0.96
NR1I3-228ENST00000511676 A0A096LPK6 155 aa9.04□□□□□ -0.96
NR1I3-228ENST00000511676 GLYATL1P3A0A0U1RQE8 302 aa9.04□□□□□ -0.96
NR1I3-228ENST00000511676 C4orf47A7E2U8 309 aa9.04□□□□□ -0.96
NR1I3-228ENST00000511676 EIF3FO00303 357 aaPredicted RBP9.04□□□□□ -0.96
NR1I3-228ENST00000511676 QSOX1O00391 747 aa9.04□□□□□ -0.96
NR1I3-228ENST00000511676 AURKAO14965 403 aa9.04□□□□□ -0.96
NR1I3-228ENST00000511676 AREL1O15033 823 aa9.04□□□□□ -0.96
NR1I3-228ENST00000511676 H2AFYO75367 372 aaKnown RBP9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms