RNA–Protein interactions for RNA: ENST00000511409.1

TRAPPC11-207, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-207ENST00000511409 ECT2LQ008S8 904 aa3.38□□□□□ -1.87
TRAPPC11-207ENST00000511409 CALD1Q05682 793 aaKnown RBP3.38□□□□□ -1.87
TRAPPC11-207ENST00000511409 TNFAIP1Q13829 316 aa3.38□□□□□ -1.87
TRAPPC11-207ENST00000511409 KRT33BQ14525 404 aa3.38□□□□□ -1.87
TRAPPC11-207ENST00000511409 SLC39A14Q15043 492 aa3.38□□□□□ -1.87
TRAPPC11-207ENST00000511409 OASLQ15646 514 aaKnown RBP3.38□□□□□ -1.87
TRAPPC11-207ENST00000511409 DLG2Q15700 870 aa3.38□□□□□ -1.87
TRAPPC11-207ENST00000511409 BMP2KLQ5H9B9 411 aa3.38□□□□□ -1.87
TRAPPC11-207ENST00000511409 RARS2Q5T160 578 aaKnown RBP3.38□□□□□ -1.87
TRAPPC11-207ENST00000511409 NSUN5P2Q63ZY6 315 aa3.38□□□□□ -1.87
TRAPPC11-207ENST00000511409 GPR139Q6DWJ6 353 aa3.38□□□□□ -1.87
TRAPPC11-207ENST00000511409 CREB3L2Q70SY1 520 aa3.38□□□□□ -1.87
TRAPPC11-207ENST00000511409 TSPAN33Q86UF1 283 aa3.38□□□□□ -1.87
TRAPPC11-207ENST00000511409 KBTBD6Q86V97 674 aa3.38□□□□□ -1.87
TRAPPC11-207ENST00000511409 LINC00346Q8IVM7 164 aa3.38□□□□□ -1.87
TRAPPC11-207ENST00000511409 MCUQ8NE86 351 aa3.38□□□□□ -1.87
TRAPPC11-207ENST00000511409 UTP15Q8TED0 518 aaKnown RBP3.38□□□□□ -1.87
TRAPPC11-207ENST00000511409 DNAAF4Q8WXU2 420 aa3.38□□□□□ -1.87
TRAPPC11-207ENST00000511409 TANKQ92844 425 aa3.38□□□□□ -1.87
TRAPPC11-207ENST00000511409 RHBDF1Q96CC6 855 aa3.38□□□□□ -1.87
TRAPPC11-207ENST00000511409 PHF21BQ96EK2 531 aa3.38□□□□□ -1.87
TRAPPC11-207ENST00000511409 THOC3Q96J01 351 aaKnown RBP3.38□□□□□ -1.87
TRAPPC11-207ENST00000511409 SLF1Q9BQI6 1058 aa3.38□□□□□ -1.87
TRAPPC11-207ENST00000511409 TM6SF1Q9BZW5 370 aa3.38□□□□□ -1.87
TRAPPC11-207ENST00000511409 OSGEPL1Q9H4B0 414 aa3.38□□□□□ -1.87
TRAPPC11-207ENST00000511409 GIMAP4Q9NUV9 329 aa3.38□□□□□ -1.87
TRAPPC11-207ENST00000511409 CLIC5Q9NZA1 410 aa3.38□□□□□ -1.87
TRAPPC11-207ENST00000511409 CPSF2Q9P2I0 782 aaKnown RBP3.38□□□□□ -1.87
TRAPPC11-207ENST00000511409 SEC63Q9UGP8 760 aaKnown RBP3.38□□□□□ -1.87
TRAPPC11-207ENST00000511409 KCNS2Q9ULS6 477 aa3.38□□□□□ -1.87
TRAPPC11-207ENST00000511409 MAGED1Q9Y5V3 778 aaPredicted RBP3.38□□□□□ -1.87
TRAPPC11-207ENST00000511409 ARHGEF40Q8TER5 1519 aa3.38□□□□□ -1.87
TRAPPC11-207ENST00000511409 IGLV5-37A0A075B6J1 123 aa3.37□□□□□ -1.87
TRAPPC11-207ENST00000511409 OR2A25A4D2G3 310 aa3.37□□□□□ -1.87
TRAPPC11-207ENST00000511409 SMAD9O15198 467 aaKnown RBP3.37□□□□□ -1.87
TRAPPC11-207ENST00000511409 P4HA2O15460 535 aa3.37□□□□□ -1.87
TRAPPC11-207ENST00000511409 INSIG1O15503 277 aa3.37□□□□□ -1.87
TRAPPC11-207ENST00000511409 ZBTB43O43298 467 aa3.37□□□□□ -1.87
TRAPPC11-207ENST00000511409 PLPP2O43688 288 aa3.37□□□□□ -1.87
TRAPPC11-207ENST00000511409 AVILO75366 819 aa3.37□□□□□ -1.87
TRAPPC11-207ENST00000511409 ERAL1O75616 437 aaKnown RBP3.37□□□□□ -1.87
TRAPPC11-207ENST00000511409 RSL1D1O76021 490 aaKnown RBP3.37□□□□□ -1.87
TRAPPC11-207ENST00000511409 PAPSS2O95340 614 aaPredicted RBP3.37□□□□□ -1.87
TRAPPC11-207ENST00000511409 NTN1O95631 604 aa3.37□□□□□ -1.87
TRAPPC11-207ENST00000511409 T-ENOLP0DO92 83 aa3.37□□□□□ -1.87
TRAPPC11-207ENST00000511409 ZNF12P17014 697 aa3.37□□□□□ -1.87
TRAPPC11-207ENST00000511409 GNL1P36915 607 aaPredicted RBP3.37□□□□□ -1.87
TRAPPC11-207ENST00000511409 PDLIM4P50479 330 aa3.37□□□□□ -1.87
TRAPPC11-207ENST00000511409 SUOXP51687 545 aa3.37□□□□□ -1.87
TRAPPC11-207ENST00000511409 TUBA1BP68363 451 aa3.37□□□□□ -1.87
TRAPPC11-207ENST00000511409 LTBQ06643 244 aa3.37□□□□□ -1.87
TRAPPC11-207ENST00000511409 ZNF155Q12901 538 aaPredicted RBP3.37□□□□□ -1.87
TRAPPC11-207ENST00000511409 PRPF4BQ13523 1007 aaKnown RBP3.37□□□□□ -1.87
TRAPPC11-207ENST00000511409 FHL1Q13642 323 aa3.37□□□□□ -1.87
TRAPPC11-207ENST00000511409 BECN1Q14457 450 aa3.37□□□□□ -1.87
TRAPPC11-207ENST00000511409 DECR1Q16698 335 aa3.37□□□□□ -1.87
TRAPPC11-207ENST00000511409 CCDC96Q2M329 555 aa3.37□□□□□ -1.87
TRAPPC11-207ENST00000511409 MYLK3Q32MK0 819 aa3.37□□□□□ -1.87
TRAPPC11-207ENST00000511409 C18orf63Q68DL7 685 aa3.37□□□□□ -1.87
TRAPPC11-207ENST00000511409 FAM122CQ6P4D5 195 aa3.37□□□□□ -1.87
TRAPPC11-207ENST00000511409 GALNT5Q7Z7M9 940 aa3.37□□□□□ -1.87
TRAPPC11-207ENST00000511409 AACSQ86V21 672 aa3.37□□□□□ -1.87
TRAPPC11-207ENST00000511409 MAP7D3Q8IWC1 876 aa3.37□□□□□ -1.87
TRAPPC11-207ENST00000511409 CHERPQ8IWX8 916 aaKnown RBP3.37□□□□□ -1.87
TRAPPC11-207ENST00000511409 ZNF34Q8IZ26 560 aa3.37□□□□□ -1.87
TRAPPC11-207ENST00000511409 OR8H2Q8N162 312 aa3.37□□□□□ -1.87
TRAPPC11-207ENST00000511409 SCML4Q8N228 414 aa3.37□□□□□ -1.87
TRAPPC11-207ENST00000511409 NME8Q8N427 588 aa3.37□□□□□ -1.87
TRAPPC11-207ENST00000511409 RASGEF1CQ8N431 466 aa3.37□□□□□ -1.87
TRAPPC11-207ENST00000511409 EMC1Q8N766 993 aa3.37□□□□□ -1.87
TRAPPC11-207ENST00000511409 IL17RCQ8NAC3 791 aa3.37□□□□□ -1.87
TRAPPC11-207ENST00000511409 MAGEC3Q8TD91 643 aa3.37□□□□□ -1.87
TRAPPC11-207ENST00000511409 TRPC4APQ8TEL6 797 aa3.37□□□□□ -1.87
TRAPPC11-207ENST00000511409 DUSP19Q8WTR2 217 aa3.37□□□□□ -1.87
TRAPPC11-207ENST00000511409 TAAR8Q969N4 342 aa3.37□□□□□ -1.87
TRAPPC11-207ENST00000511409 SLC22A18Q96BI1 424 aa3.37□□□□□ -1.87
TRAPPC11-207ENST00000511409 RTP4Q96DX8 246 aa3.37□□□□□ -1.87
TRAPPC11-207ENST00000511409 TMEM19Q96HH6 336 aa3.37□□□□□ -1.87
TRAPPC11-207ENST00000511409 MED30Q96HR3 178 aa3.37□□□□□ -1.87
TRAPPC11-207ENST00000511409 CEP295NLQ96MC4 621 aa3.37□□□□□ -1.87
TRAPPC11-207ENST00000511409 QRFPRQ96P65 431 aa3.37□□□□□ -1.87
TRAPPC11-207ENST00000511409 DDOQ99489 341 aa3.37□□□□□ -1.87
TRAPPC11-207ENST00000511409 KIFC3Q9BVG8 833 aa3.37□□□□□ -1.87
TRAPPC11-207ENST00000511409 APOL6Q9BWW8 343 aa3.37□□□□□ -1.87
TRAPPC11-207ENST00000511409 TMEM39BQ9GZU3 492 aa3.37□□□□□ -1.87
TRAPPC11-207ENST00000511409 RAD21L1Q9H4I0 556 aa3.37□□□□□ -1.87
TRAPPC11-207ENST00000511409 MAGIXQ9H6Y5 334 aa3.37□□□□□ -1.87
TRAPPC11-207ENST00000511409 PLSCR4Q9NRQ2 329 aa3.37□□□□□ -1.87
TRAPPC11-207ENST00000511409 MCM9Q9NXL9 1143 aa3.37□□□□□ -1.87
TRAPPC11-207ENST00000511409 NKIRAS2Q9NYR9 191 aa3.37□□□□□ -1.87
TRAPPC11-207ENST00000511409 SMARCAL1Q9NZC9 954 aa3.37□□□□□ -1.87
TRAPPC11-207ENST00000511409 C1RLQ9NZP8 487 aa3.37□□□□□ -1.87
TRAPPC11-207ENST00000511409 SIX4Q9UIU6 781 aa3.37□□□□□ -1.87
TRAPPC11-207ENST00000511409 PADI1Q9ULC6 663 aa3.37□□□□□ -1.87
TRAPPC11-207ENST00000511409 B3GALT5Q9Y2C3 310 aa3.37□□□□□ -1.87
TRAPPC11-207ENST00000511409 AMDHD2Q9Y303 409 aa3.37□□□□□ -1.87
TRAPPC11-207ENST00000511409 PCDHGA5Q9Y5G8 931 aa3.37□□□□□ -1.87
TRAPPC11-207ENST00000511409 A0A0G2JPF8 293 aa3.36□□□□□ -1.87
TRAPPC11-207ENST00000511409 A6NL46 340 aa3.36□□□□□ -1.87
TRAPPC11-207ENST00000511409 HNRNPCL3B7ZW38 293 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms