RNA–Protein interactions for RNA: ENST00000509006.1

DEPDC1B-204, Transcript of DEP domain containing 1B, humanhuman

TSL 4

Gene DEPDC1B, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-204ENST00000509006 PRSS2P07478 247 aa2.42□□□□□ -2.02
DEPDC1B-204ENST00000509006 HOXB5P09067 269 aa2.42□□□□□ -2.02
DEPDC1B-204ENST00000509006 ACTN1P12814 892 aa2.42□□□□□ -2.02
DEPDC1B-204ENST00000509006 PEPDP12955 493 aa2.42□□□□□ -2.02
DEPDC1B-204ENST00000509006 RARGP13631 454 aa2.42□□□□□ -2.02
DEPDC1B-204ENST00000509006 ARF4P18085 180 aaPredicted RBP2.42□□□□□ -2.02
DEPDC1B-204ENST00000509006 CPT2P23786 658 aa2.42□□□□□ -2.02
DEPDC1B-204ENST00000509006 PTAFRP25105 342 aa2.42□□□□□ -2.02
DEPDC1B-204ENST00000509006 ITGB8P26012 769 aa2.42□□□□□ -2.02
DEPDC1B-204ENST00000509006 POU1F1P28069 291 aa2.42□□□□□ -2.02
DEPDC1B-204ENST00000509006 TTKP33981 857 aa2.42□□□□□ -2.02
DEPDC1B-204ENST00000509006 RFC1P35251 1148 aaPredicted RBP2.42□□□□□ -2.02
DEPDC1B-204ENST00000509006 SOAT1P35610 550 aa2.42□□□□□ -2.02
DEPDC1B-204ENST00000509006 PSMC4P43686 418 aa2.42□□□□□ -2.02
DEPDC1B-204ENST00000509006 TAF6P49848 677 aa2.42□□□□□ -2.02
DEPDC1B-204ENST00000509006 RAB28P51157 221 aa2.42□□□□□ -2.02
DEPDC1B-204ENST00000509006 BMXP51813 675 aa2.42□□□□□ -2.02
DEPDC1B-204ENST00000509006 CAPZA1P52907 286 aa2.42□□□□□ -2.02
DEPDC1B-204ENST00000509006 CSE1LP55060 971 aaKnown RBP2.42□□□□□ -2.02
DEPDC1B-204ENST00000509006 MFAP4P55083 255 aa2.42□□□□□ -2.02
DEPDC1B-204ENST00000509006 STX1BP61266 288 aa2.42□□□□□ -2.02
DEPDC1B-204ENST00000509006 RPL15P61313 204 aaKnown RBP2.42□□□□□ -2.02
DEPDC1B-204ENST00000509006 EFNB1P98172 346 aa2.42□□□□□ -2.02
DEPDC1B-204ENST00000509006 RHAGQ02094 409 aa2.42□□□□□ -2.02
DEPDC1B-204ENST00000509006 ZBTB16Q05516 673 aa2.42□□□□□ -2.02
DEPDC1B-204ENST00000509006 LRRC74AQ0VAA2 488 aa2.42□□□□□ -2.02
DEPDC1B-204ENST00000509006 TMEM115Q12893 351 aaPredicted RBP2.42□□□□□ -2.02
DEPDC1B-204ENST00000509006 CAMK2DQ13557 499 aa2.42□□□□□ -2.02
DEPDC1B-204ENST00000509006 ALKBH1Q13686 389 aaKnown RBP2.42□□□□□ -2.02
DEPDC1B-204ENST00000509006 ALCAMQ13740 583 aa2.42□□□□□ -2.02
DEPDC1B-204ENST00000509006 ZNF672Q499Z4 452 aaPredicted RBP2.42□□□□□ -2.02
DEPDC1B-204ENST00000509006 WBP2NLQ6ICG8 309 aa2.42□□□□□ -2.02
DEPDC1B-204ENST00000509006 ETFRF1Q6IPR1 90 aa2.42□□□□□ -2.02
DEPDC1B-204ENST00000509006 TTI2Q6NXR4 508 aa2.42□□□□□ -2.02
DEPDC1B-204ENST00000509006 TMEM71Q6P5X7 295 aa2.42□□□□□ -2.02
DEPDC1B-204ENST00000509006 TMEM81Q6P7N7 255 aa2.42□□□□□ -2.02
DEPDC1B-204ENST00000509006 AAGABQ6PD74 315 aa2.42□□□□□ -2.02
DEPDC1B-204ENST00000509006 MEX3BQ6ZN04 569 aaKnown RBP2.42□□□□□ -2.02
DEPDC1B-204ENST00000509006 SLC46A3Q7Z3Q1 461 aa2.42□□□□□ -2.02
DEPDC1B-204ENST00000509006 CEP57Q86XR8 500 aa2.42□□□□□ -2.02
DEPDC1B-204ENST00000509006 TUSC5Q8IXB3 177 aa2.42□□□□□ -2.02
DEPDC1B-204ENST00000509006 FAM217AQ8IXS0 508 aa2.42□□□□□ -2.02
DEPDC1B-204ENST00000509006 HACE1Q8IYU2 909 aa2.42□□□□□ -2.02
DEPDC1B-204ENST00000509006 SCML4Q8N228 414 aa2.42□□□□□ -2.02
DEPDC1B-204ENST00000509006 HDDC3Q8N4P3 179 aa2.42□□□□□ -2.02
DEPDC1B-204ENST00000509006 ENDOVQ8N8Q3 282 aaKnown RBP2.42□□□□□ -2.02
DEPDC1B-204ENST00000509006 IQUBQ8NA54 791 aa2.42□□□□□ -2.02
DEPDC1B-204ENST00000509006 TMEM116Q8NCL8 245 aa2.42□□□□□ -2.02
DEPDC1B-204ENST00000509006 SPATA20Q8TB22 786 aa2.42□□□□□ -2.02
DEPDC1B-204ENST00000509006 ARRDC3Q96B67 414 aa2.42□□□□□ -2.02
DEPDC1B-204ENST00000509006 RTP4Q96DX8 246 aa2.42□□□□□ -2.02
DEPDC1B-204ENST00000509006 EEF2KMTQ96G04 330 aa2.42□□□□□ -2.02
DEPDC1B-204ENST00000509006 HES6Q96HZ4 224 aa2.42□□□□□ -2.02
DEPDC1B-204ENST00000509006 CABS1Q96KC9 395 aa2.42□□□□□ -2.02
DEPDC1B-204ENST00000509006 APOLD1Q96LR9 279 aa2.42□□□□□ -2.02
DEPDC1B-204ENST00000509006 KLHL15Q96M94 604 aa2.42□□□□□ -2.02
DEPDC1B-204ENST00000509006 ATP6V0BQ99437 205 aa2.42□□□□□ -2.02
DEPDC1B-204ENST00000509006 PKP4Q99569 1192 aa2.42□□□□□ -2.02
DEPDC1B-204ENST00000509006 NPAS1Q99742 590 aa2.42□□□□□ -2.02
DEPDC1B-204ENST00000509006 PIP5K1AQ99755 562 aa2.42□□□□□ -2.02
DEPDC1B-204ENST00000509006 CCDC106Q9BWC9 280 aa2.42□□□□□ -2.02
DEPDC1B-204ENST00000509006 PHF7Q9BWX1 381 aaPredicted RBP2.42□□□□□ -2.02
DEPDC1B-204ENST00000509006 STRA6Q9BX79 667 aa2.42□□□□□ -2.02
DEPDC1B-204ENST00000509006 USP44Q9H0E7 712 aa2.42□□□□□ -2.02
DEPDC1B-204ENST00000509006 IL25Q9H293 177 aa2.42□□□□□ -2.02
DEPDC1B-204ENST00000509006 KLHL31Q9H511 634 aa2.42□□□□□ -2.02
DEPDC1B-204ENST00000509006 THAP9Q9H5L6 903 aa2.42□□□□□ -2.02
DEPDC1B-204ENST00000509006 EPHX3Q9H6B9 360 aa2.42□□□□□ -2.02
DEPDC1B-204ENST00000509006 OGFRQ9NZT2 677 aa2.42□□□□□ -2.02
DEPDC1B-204ENST00000509006 CTNNA3Q9UI47 895 aa2.42□□□□□ -2.02
DEPDC1B-204ENST00000509006 TSPYL4Q9UJ04 414 aa2.42□□□□□ -2.02
DEPDC1B-204ENST00000509006 ANAPC2Q9UJX6 822 aa2.42□□□□□ -2.02
DEPDC1B-204ENST00000509006 CHKBQ9Y259 395 aa2.42□□□□□ -2.02
DEPDC1B-204ENST00000509006 SLC4A4Q9Y6R1 1079 aa2.42□□□□□ -2.02
DEPDC1B-204ENST00000509006 ADGRF5Q8IZF2 1346 aa2.42□□□□□ -2.02
DEPDC1B-204ENST00000509006 SYNRGQ9UMZ2 1314 aa2.42□□□□□ -2.02
DEPDC1B-204ENST00000509006 DENND3A2RUS2 1198 aa2.41□□□□□ -2.02
DEPDC1B-204ENST00000509006 KRT87PA6NCN2 255 aa2.41□□□□□ -2.02
DEPDC1B-204ENST00000509006 TMEM247A6NEH6 219 aa2.41□□□□□ -2.02
DEPDC1B-204ENST00000509006 A8MZ25 164 aa2.41□□□□□ -2.02
DEPDC1B-204ENST00000509006 MS4A18H0YCH9 400 aa2.41□□□□□ -2.02
DEPDC1B-204ENST00000509006 VWA5AO00534 786 aa2.41□□□□□ -2.02
DEPDC1B-204ENST00000509006 CAPN9O14815 690 aa2.41□□□□□ -2.02
DEPDC1B-204ENST00000509006 IFIT3O14879 490 aaKnown RBP2.41□□□□□ -2.02
DEPDC1B-204ENST00000509006 SYN3O14994 580 aa2.41□□□□□ -2.02
DEPDC1B-204ENST00000509006 LDB2O43679 373 aa2.41□□□□□ -2.02
DEPDC1B-204ENST00000509006 STRNO43815 780 aa2.41□□□□□ -2.02
DEPDC1B-204ENST00000509006 PRPSAP2O60256 369 aa2.41□□□□□ -2.02
DEPDC1B-204ENST00000509006 RTN2O75298 545 aa2.41□□□□□ -2.02
DEPDC1B-204ENST00000509006 GPC4O75487 556 aa2.41□□□□□ -2.02
DEPDC1B-204ENST00000509006 SLC25A12O75746 678 aa2.41□□□□□ -2.02
DEPDC1B-204ENST00000509006 KRT36O76013 467 aa2.41□□□□□ -2.02
DEPDC1B-204ENST00000509006 DDHD2O94830 711 aa2.41□□□□□ -2.02
DEPDC1B-204ENST00000509006 CHRM4P08173 479 aa2.41□□□□□ -2.02
DEPDC1B-204ENST00000509006 SRPRAP08240 638 aaKnown RBP2.41□□□□□ -2.02
DEPDC1B-204ENST00000509006 CYP4B1P13584 511 aa2.41□□□□□ -2.02
DEPDC1B-204ENST00000509006 KRT13P13646 458 aa2.41□□□□□ -2.02
DEPDC1B-204ENST00000509006 CHRNA5P30532 468 aa2.41□□□□□ -2.02
DEPDC1B-204ENST00000509006 FMO4P31512 558 aa2.41□□□□□ -2.02
DEPDC1B-204ENST00000509006 GARSP41250 739 aaKnown RBP2.41□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms