RNA–Protein interactions for RNA: ENST00000508465.5

NUP54-206, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 744 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-206ENST00000508465 RETP07949 1114 aa4.65□□□□□ -1.67
NUP54-206ENST00000508465 SKILP12757 684 aa4.65□□□□□ -1.67
NUP54-206ENST00000508465 POLR2EP19388 210 aaKnown RBP4.65□□□□□ -1.67
NUP54-206ENST00000508465 P2RY2P41231 377 aa4.65□□□□□ -1.67
NUP54-206ENST00000508465 CSKP41240 450 aa4.65□□□□□ -1.67
NUP54-206ENST00000508465 MATKP42679 507 aa4.65□□□□□ -1.67
NUP54-206ENST00000508465 PTGER3P43115 390 aa4.65□□□□□ -1.67
NUP54-206ENST00000508465 GABRB2P47870 512 aa4.65□□□□□ -1.67
NUP54-206ENST00000508465 DHPSP49366 369 aaPredicted RBP4.65□□□□□ -1.67
NUP54-206ENST00000508465 ZNF81P51508 661 aa4.65□□□□□ -1.67
NUP54-206ENST00000508465 CHN2P52757 468 aa4.65□□□□□ -1.67
NUP54-206ENST00000508465 SNX16P57768 344 aa4.65□□□□□ -1.67
NUP54-206ENST00000508465 NOMO3P69849 1222 aa4.65□□□□□ -1.67
NUP54-206ENST00000508465 MRPS35P82673 323 aaKnown RBP4.65□□□□□ -1.67
NUP54-206ENST00000508465 FMO1Q01740 532 aa4.65□□□□□ -1.67
NUP54-206ENST00000508465 CDR2Q01850 454 aa4.65□□□□□ -1.67
NUP54-206ENST00000508465 CREB5Q02930 508 aa4.65□□□□□ -1.67
NUP54-206ENST00000508465 DEUP1Q05D60 604 aa4.65□□□□□ -1.67
NUP54-206ENST00000508465 SRSF4Q08170 494 aaKnown RBP4.65□□□□□ -1.67
NUP54-206ENST00000508465 LMAN2Q12907 356 aa4.65□□□□□ -1.67
NUP54-206ENST00000508465 EIF4EBP2Q13542 120 aaPredicted RBP4.65□□□□□ -1.67
NUP54-206ENST00000508465 C15orf59Q2T9L4 293 aaPredicted RBP4.65□□□□□ -1.67
NUP54-206ENST00000508465 KLHL40Q2TBA0 621 aa4.65□□□□□ -1.67
NUP54-206ENST00000508465 ZSCAN23Q3MJ62 389 aa4.65□□□□□ -1.67
NUP54-206ENST00000508465 FUT11Q495W5 492 aa4.65□□□□□ -1.67
NUP54-206ENST00000508465 PREPLQ4J6C6 727 aaPredicted RBP4.65□□□□□ -1.67
NUP54-206ENST00000508465 MS4A13Q5J8X5 152 aa4.65□□□□□ -1.67
NUP54-206ENST00000508465 ATXN7L2Q5T6C5 722 aaPredicted RBP4.65□□□□□ -1.67
NUP54-206ENST00000508465 AGAP9Q5VTM2 703 aa4.65□□□□□ -1.67
NUP54-206ENST00000508465 OTUD1Q5VV17 481 aaPredicted RBP4.65□□□□□ -1.67
NUP54-206ENST00000508465 METRNLQ641Q3 311 aa4.65□□□□□ -1.67
NUP54-206ENST00000508465 NUGGCQ68CJ6 796 aa4.65□□□□□ -1.67
NUP54-206ENST00000508465 TCEAL6Q6IPX3 200 aa4.65□□□□□ -1.67
NUP54-206ENST00000508465 FBXL22Q6P050 247 aa4.65□□□□□ -1.67
NUP54-206ENST00000508465 CHST9Q7L1S5 443 aa4.65□□□□□ -1.67
NUP54-206ENST00000508465 BEND5Q7L4P6 421 aa4.65□□□□□ -1.67
NUP54-206ENST00000508465 IRF2BP2Q7Z5L9 587 aa4.65□□□□□ -1.67
NUP54-206ENST00000508465 ANKS1BQ7Z6G8 1248 aa4.65□□□□□ -1.67
NUP54-206ENST00000508465 CHSY1Q86X52 802 aa4.65□□□□□ -1.67
NUP54-206ENST00000508465 KIF18BQ86Y91 864 aa4.65□□□□□ -1.67
NUP54-206ENST00000508465 RHOT2Q8IXI1 618 aa4.65□□□□□ -1.67
NUP54-206ENST00000508465 EMC1Q8N766 993 aa4.65□□□□□ -1.67
NUP54-206ENST00000508465 ATP6V0D2Q8N8Y2 350 aa4.65□□□□□ -1.67
NUP54-206ENST00000508465 HJURPQ8NCD3 748 aaPredicted RBP4.65□□□□□ -1.67
NUP54-206ENST00000508465 CCDC26Q8TAB7 109 aa4.65□□□□□ -1.67
NUP54-206ENST00000508465 OLIG1Q8TAK6 271 aa4.65□□□□□ -1.67
NUP54-206ENST00000508465 FIBINQ8TAL6 211 aa4.65□□□□□ -1.67
NUP54-206ENST00000508465 MDM1Q8TC05 714 aa4.65□□□□□ -1.67
NUP54-206ENST00000508465 SNX33Q8WV41 574 aa4.65□□□□□ -1.67
NUP54-206ENST00000508465 PIGKQ92643 395 aa4.65□□□□□ -1.67
NUP54-206ENST00000508465 TCEAL3Q969E4 200 aa4.65□□□□□ -1.67
NUP54-206ENST00000508465 AZIN2Q96A70 460 aa4.65□□□□□ -1.67
NUP54-206ENST00000508465 RMDN1Q96DB5 314 aa4.65□□□□□ -1.67
NUP54-206ENST00000508465 BTN2A3PQ96KV6 586 aa4.65□□□□□ -1.67
NUP54-206ENST00000508465 CFAP57Q96MR6 1250 aa4.65□□□□□ -1.67
NUP54-206ENST00000508465 PRICKLE1Q96MT3 831 aaPredicted RBP4.65□□□□□ -1.67
NUP54-206ENST00000508465 SERPINB11Q96P15 392 aa4.65□□□□□ -1.67
NUP54-206ENST00000508465 ERGIC2Q96RQ1 377 aa4.65□□□□□ -1.67
NUP54-206ENST00000508465 NPY6RQ99463 290 aa4.65□□□□□ -1.67
NUP54-206ENST00000508465 PRMT1Q99873 361 aaKnown RBP4.65□□□□□ -1.67
NUP54-206ENST00000508465 AGPAT1Q99943 283 aa4.65□□□□□ -1.67
NUP54-206ENST00000508465 DDX50Q9BQ39 737 aaKnown RBP4.65□□□□□ -1.67
NUP54-206ENST00000508465 HEPHQ9BQS7 1158 aa4.65□□□□□ -1.67
NUP54-206ENST00000508465 FUCA2Q9BTY2 467 aa4.65□□□□□ -1.67
NUP54-206ENST00000508465 SLC2A11Q9BYW1 496 aa4.65□□□□□ -1.67
NUP54-206ENST00000508465 TKTL2Q9H0I9 626 aa4.65□□□□□ -1.67
NUP54-206ENST00000508465 WDCPQ9H6R7 721 aa4.65□□□□□ -1.67
NUP54-206ENST00000508465 PRDM16Q9HAZ2 1276 aa4.65□□□□□ -1.67
NUP54-206ENST00000508465 FSCN3Q9NQT6 498 aa4.65□□□□□ -1.67
NUP54-206ENST00000508465 TAS2R14Q9NYV8 317 aa4.65□□□□□ -1.67
NUP54-206ENST00000508465 H2AFY2Q9P0M6 372 aaPredicted RBP4.65□□□□□ -1.67
NUP54-206ENST00000508465 THAP10Q9P2Z0 257 aaPredicted RBP4.65□□□□□ -1.67
NUP54-206ENST00000508465 SLC12A6Q9UHW9 1150 aa4.65□□□□□ -1.67
NUP54-206ENST00000508465 SLCO3A1Q9UIG8 710 aa4.65□□□□□ -1.67
NUP54-206ENST00000508465 GGA2Q9UJY4 613 aa4.65□□□□□ -1.67
NUP54-206ENST00000508465 STOML2Q9UJZ1 356 aa4.65□□□□□ -1.67
NUP54-206ENST00000508465 GMEB2Q9UKD1 530 aa4.65□□□□□ -1.67
NUP54-206ENST00000508465 INTS6Q9UL03 887 aaKnown RBP4.65□□□□□ -1.67
NUP54-206ENST00000508465 VANGL2Q9ULK5 521 aa4.65□□□□□ -1.67
NUP54-206ENST00000508465 PLA2G4CQ9UP65 541 aa4.65□□□□□ -1.67
NUP54-206ENST00000508465 DMTF1Q9Y222 760 aa4.65□□□□□ -1.67
NUP54-206ENST00000508465 SPTBN4Q9H254 2564 aa4.65□□□□□ -1.67
NUP54-206ENST00000508465 FAM186AA6NE01 2351 aa4.65□□□□□ -1.67
NUP54-206ENST00000508465 GON4LQ3T8J9 2241 aa4.64□□□□□ -1.67
NUP54-206ENST00000508465 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.64□□□□□ -1.67
NUP54-206ENST00000508465 BCLAF3A2AJT9 711 aaKnown RBP4.64□□□□□ -1.67
NUP54-206ENST00000508465 LRRC3CA6NJW4 275 aa4.64□□□□□ -1.67
NUP54-206ENST00000508465 TTC34A8MYJ7 566 aa4.64□□□□□ -1.67
NUP54-206ENST00000508465 F5H5T6 163 aa4.64□□□□□ -1.67
NUP54-206ENST00000508465 PLK4O00444 970 aa4.64□□□□□ -1.67
NUP54-206ENST00000508465 IRAK2O43187 625 aa4.64□□□□□ -1.67
NUP54-206ENST00000508465 DAB1O75553 588 aa4.64□□□□□ -1.67
NUP54-206ENST00000508465 RHOBTB1O94844 696 aa4.64□□□□□ -1.67
NUP54-206ENST00000508465 ZFPL1O95159 310 aa4.64□□□□□ -1.67
NUP54-206ENST00000508465 LSM8O95777 96 aaKnown RBP4.64□□□□□ -1.67
NUP54-206ENST00000508465 CAVIN2O95810 425 aa4.64□□□□□ -1.67
NUP54-206ENST00000508465 LATS1O95835 1130 aa4.64□□□□□ -1.67
NUP54-206ENST00000508465 SLC2A3P11169 496 aa4.64□□□□□ -1.67
NUP54-206ENST00000508465 PDGFRAP16234 1089 aa4.64□□□□□ -1.67
NUP54-206ENST00000508465 ABCB4P21439 1286 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms