RNA–Protein interactions for RNA: ENST00000506244.5

SNCA-209, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 570 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-209ENST00000506244 GULP1Q9UBP9 304 aa16.52■□□□□ 0.24
SNCA-209ENST00000506244 ZNHIT2Q9UHR6 403 aa16.52■□□□□ 0.24
SNCA-209ENST00000506244 PADI4Q9UM07 663 aa16.52■□□□□ 0.24
SNCA-209ENST00000506244 CPED1A4D0V7 1026 aa16.51■□□□□ 0.23
SNCA-209ENST00000506244 EME2A4GXA9 379 aaPredicted RBP16.51■□□□□ 0.23
SNCA-209ENST00000506244 GRID2O43424 1007 aa16.51■□□□□ 0.23
SNCA-209ENST00000506244 BUD23O43709 281 aaKnown RBP16.51■□□□□ 0.23
SNCA-209ENST00000506244 NUAK1O60285 661 aa16.51■□□□□ 0.23
SNCA-209ENST00000506244 DNAJC6O75061 913 aa16.51■□□□□ 0.23
SNCA-209ENST00000506244 ITGALP20701 1170 aa16.51■□□□□ 0.23
SNCA-209ENST00000506244 RPL22P35268 128 aaKnown RBP16.51■□□□□ 0.23
SNCA-209ENST00000506244 ACTR1BP42025 376 aa16.51■□□□□ 0.23
SNCA-209ENST00000506244 ACTR1AP61163 376 aa16.51■□□□□ 0.23
SNCA-209ENST00000506244 BASP1P80723 227 aaKnown RBP16.51■□□□□ 0.23
SNCA-209ENST00000506244 CTBSQ01459 385 aa16.51■□□□□ 0.23
SNCA-209ENST00000506244 POU6F1Q14863 301 aa16.51■□□□□ 0.23
SNCA-209ENST00000506244 CHRNA6Q15825 494 aa16.51■□□□□ 0.23
SNCA-209ENST00000506244 CYP1B1Q16678 543 aa16.51■□□□□ 0.23
SNCA-209ENST00000506244 GUSBP11Q6P575 273 aa16.51■□□□□ 0.23
SNCA-209ENST00000506244 SLC30A9Q6PML9 568 aa16.51■□□□□ 0.23
SNCA-209ENST00000506244 DDHD1Q8NEL9 900 aa16.51■□□□□ 0.23
SNCA-209ENST00000506244 MAPK15Q8TD08 544 aa16.51■□□□□ 0.23
SNCA-209ENST00000506244 COG1Q8WTW3 980 aa16.51■□□□□ 0.23
SNCA-209ENST00000506244 MAGOHBQ96A72 148 aaKnown RBP16.51■□□□□ 0.23
SNCA-209ENST00000506244 ULK4Q96C45 1275 aa16.51■□□□□ 0.23
SNCA-209ENST00000506244 MS4A14Q96JA4 679 aa16.51■□□□□ 0.23
SNCA-209ENST00000506244 NAPGQ99747 312 aaPredicted RBP16.51■□□□□ 0.23
SNCA-209ENST00000506244 ABCG4Q9H172 646 aa16.51■□□□□ 0.23
SNCA-209ENST00000506244 ATXN10Q9UBB4 475 aa16.51■□□□□ 0.23
SNCA-209ENST00000506244 KLK13Q9UKR3 277 aa16.51■□□□□ 0.23
SNCA-209ENST00000506244 MSRB2Q9Y3D2 182 aa16.51■□□□□ 0.23
SNCA-209ENST00000506244 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.51■□□□□ 0.23
SNCA-209ENST00000506244 CTAGE9A4FU28 777 aa16.5■□□□□ 0.23
SNCA-209ENST00000506244 FAM221BA6H8Z2 402 aa16.5■□□□□ 0.23
SNCA-209ENST00000506244 PHF2O75151 1096 aa16.5■□□□□ 0.23
SNCA-209ENST00000506244 CDK14O94921 469 aa16.5■□□□□ 0.23
SNCA-209ENST00000506244 FUCA1P04066 466 aa16.5■□□□□ 0.23
SNCA-209ENST00000506244 SLC2A4P14672 509 aa16.5■□□□□ 0.23
SNCA-209ENST00000506244 ETS1P14921 441 aa16.5■□□□□ 0.23
SNCA-209ENST00000506244 KCNJ1P48048 391 aa16.5■□□□□ 0.23
SNCA-209ENST00000506244 FNTAP49354 379 aa16.5■□□□□ 0.23
SNCA-209ENST00000506244 MSLNQ13421 630 aaPredicted RBP16.5■□□□□ 0.23
SNCA-209ENST00000506244 BIRC2Q13490 618 aa16.5■□□□□ 0.23
SNCA-209ENST00000506244 C14orf28Q4W4Y0 310 aa16.5■□□□□ 0.23
SNCA-209ENST00000506244 HES3Q5TGS1 186 aa16.5■□□□□ 0.23
SNCA-209ENST00000506244 OGFOD3Q6PK18 319 aa16.5■□□□□ 0.23
SNCA-209ENST00000506244 ADGRG6Q86SQ4 1221 aa16.5■□□□□ 0.23
SNCA-209ENST00000506244 LRRTM4Q86VH4 590 aa16.5■□□□□ 0.23
SNCA-209ENST00000506244 NRROSQ86YC3 692 aa16.5■□□□□ 0.23
SNCA-209ENST00000506244 GLIS1Q8NBF1 620 aa16.5■□□□□ 0.23
SNCA-209ENST00000506244 GPR156Q8NFN8 814 aa16.5■□□□□ 0.23
SNCA-209ENST00000506244 CCL4L1Q8NHW4 92 aa16.5■□□□□ 0.23
SNCA-209ENST00000506244 ZDHHC1Q8WTX9 485 aa16.5■□□□□ 0.23
SNCA-209ENST00000506244 PTCD2Q8WV60 388 aaKnown RBP16.5■□□□□ 0.23
SNCA-209ENST00000506244 AP1M1Q9BXS5 423 aa16.5■□□□□ 0.23
SNCA-209ENST00000506244 KCND1Q9NSA2 647 aa16.5■□□□□ 0.23
SNCA-209ENST00000506244 FKBPLQ9UIM3 349 aa16.5■□□□□ 0.23
SNCA-209ENST00000506244 HEATR9A2RTY3 570 aa16.49■□□□□ 0.23
SNCA-209ENST00000506244 CHUKO15111 745 aa16.49■□□□□ 0.23
SNCA-209ENST00000506244 KMOO15229 486 aa16.49■□□□□ 0.23
SNCA-209ENST00000506244 ZW10O43264 779 aa16.49■□□□□ 0.23
SNCA-209ENST00000506244 LDB2O43679 373 aa16.49■□□□□ 0.23
SNCA-209ENST00000506244 OPA1O60313 960 aa16.49■□□□□ 0.23
SNCA-209ENST00000506244 SRP72O76094 671 aaKnown RBP16.49■□□□□ 0.23
SNCA-209ENST00000506244 ZNF8P17098 575 aaPredicted RBP16.49■□□□□ 0.23
SNCA-209ENST00000506244 VCLP18206 1134 aa16.49■□□□□ 0.23
SNCA-209ENST00000506244 SPINK2P20155 84 aa16.49■□□□□ 0.23
SNCA-209ENST00000506244 AK4P27144 223 aaPredicted RBP16.49■□□□□ 0.23
SNCA-209ENST00000506244 AKT1P31749 480 aa16.49■□□□□ 0.23
SNCA-209ENST00000506244 CDK16Q00536 496 aa16.49■□□□□ 0.23
SNCA-209ENST00000506244 NFATC2Q13469 925 aa16.49■□□□□ 0.23
SNCA-209ENST00000506244 CERCAMQ5T4B2 595 aa16.49■□□□□ 0.23
SNCA-209ENST00000506244 CCDC137Q6PK04 289 aaKnown RBP16.49■□□□□ 0.23
SNCA-209ENST00000506244 CHST15Q7LFX5 561 aaPredicted RBP16.49■□□□□ 0.23
SNCA-209ENST00000506244 CACTIN-AS1Q8N1I8 211 aa16.49■□□□□ 0.23
SNCA-209ENST00000506244 OR52K1Q8NGK4 314 aa16.49■□□□□ 0.23
SNCA-209ENST00000506244 OR13C4Q8NGS5 318 aa16.49■□□□□ 0.23
SNCA-209ENST00000506244 ZNF398Q8TD17 642 aa16.49■□□□□ 0.23
SNCA-209ENST00000506244 STYXQ8WUJ0 223 aa16.49■□□□□ 0.23
SNCA-209ENST00000506244 TIMM29Q9BSF4 260 aa16.49■□□□□ 0.23
SNCA-209ENST00000506244 ASB8Q9H765 288 aa16.49■□□□□ 0.23
SNCA-209ENST00000506244 ARFGAP3Q9NP61 516 aa16.49■□□□□ 0.23
SNCA-209ENST00000506244 NLE1Q9NVX2 485 aaPredicted RBP16.49■□□□□ 0.23
SNCA-209ENST00000506244 CRLS1Q9UJA2 301 aa16.49■□□□□ 0.23
SNCA-209ENST00000506244 SLC30A1Q9Y6M5 507 aa16.49■□□□□ 0.23
SNCA-209ENST00000506244 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.48■□□□□ 0.23
SNCA-209ENST00000506244 H7C0S8 307 aa16.48■□□□□ 0.23
SNCA-209ENST00000506244 GAPDHSO14556 408 aaPredicted RBP16.48■□□□□ 0.23
SNCA-209ENST00000506244 NUDT21O43809 227 aaKnown RBP16.48■□□□□ 0.23
SNCA-209ENST00000506244 NOBOXO60393 691 aa16.48■□□□□ 0.23
SNCA-209ENST00000506244 TOP3BO95985 862 aaKnown RBP16.48■□□□□ 0.23
SNCA-209ENST00000506244 ZSCAN5DPP0CG00 497 aa16.48■□□□□ 0.23
SNCA-209ENST00000506244 RALBP11234 206 aa16.48■□□□□ 0.23
SNCA-209ENST00000506244 MYF5P13349 255 aa16.48■□□□□ 0.23
SNCA-209ENST00000506244 ACP5P13686 325 aa16.48■□□□□ 0.23
SNCA-209ENST00000506244 JUPP14923 745 aa16.48■□□□□ 0.23
SNCA-209ENST00000506244 PNLIPP16233 465 aa16.48■□□□□ 0.23
SNCA-209ENST00000506244 GLB1P16278 677 aa16.48■□□□□ 0.23
SNCA-209ENST00000506244 TPH1P17752 444 aa16.48■□□□□ 0.23
SNCA-209ENST00000506244 TPSB2P20231 275 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms