RNA–Protein interactions for RNA: ENST00000506063.1

TCOF1-208, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 4

Gene TCOF1, Length 526 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-208ENST00000506063 FOXP1Q9H334 677 aaPredicted RBP3.28□□□□□ -1.88
TCOF1-208ENST00000506063 WDR26Q9H7D7 661 aa3.28□□□□□ -1.88
TCOF1-208ENST00000506063 MRPL44Q9H9J2 332 aaKnown RBP3.28□□□□□ -1.88
TCOF1-208ENST00000506063 L2HGDHQ9H9P8 463 aa3.28□□□□□ -1.88
TCOF1-208ENST00000506063 UCK1Q9HA47 277 aa3.28□□□□□ -1.88
TCOF1-208ENST00000506063 SLC24A3Q9HC58 644 aa3.28□□□□□ -1.88
TCOF1-208ENST00000506063 PCDH12Q9NPG4 1184 aa3.28□□□□□ -1.88
TCOF1-208ENST00000506063 ATP13A2Q9NQ11 1180 aa3.28□□□□□ -1.88
TCOF1-208ENST00000506063 OLFML3Q9NRN5 406 aa3.28□□□□□ -1.88
TCOF1-208ENST00000506063 EPHA6Q9UF33 1036 aa3.28□□□□□ -1.88
TCOF1-208ENST00000506063 TBC1D29Q9UFV1 150 aa3.28□□□□□ -1.88
TCOF1-208ENST00000506063 SERTAD1Q9UHV2 236 aa3.28□□□□□ -1.88
TCOF1-208ENST00000506063 MOSPD1Q9UJG1 213 aa3.28□□□□□ -1.88
TCOF1-208ENST00000506063 FBXL4Q9UKA2 621 aa3.28□□□□□ -1.88
TCOF1-208ENST00000506063 PPT2Q9UMR5 302 aa3.28□□□□□ -1.88
TCOF1-208ENST00000506063 EDARQ9UNE0 448 aa3.28□□□□□ -1.88
TCOF1-208ENST00000506063 EXOC7Q9UPT5 735 aa3.28□□□□□ -1.88
TCOF1-208ENST00000506063 TRAV17A0A0B4J275 112 aa3.27□□□□□ -1.89
TCOF1-208ENST00000506063 MBD3L4A6NDZ8 208 aaPredicted RBP3.27□□□□□ -1.89
TCOF1-208ENST00000506063 MBD3L5A6NJ08 208 aaPredicted RBP3.27□□□□□ -1.89
TCOF1-208ENST00000506063 AGPSO00116 658 aa3.27□□□□□ -1.89
TCOF1-208ENST00000506063 PIK3R2O00459 728 aa3.27□□□□□ -1.89
TCOF1-208ENST00000506063 KRIT1O00522 736 aa3.27□□□□□ -1.89
TCOF1-208ENST00000506063 EPB41L2O43491 1005 aaKnown RBP3.27□□□□□ -1.89
TCOF1-208ENST00000506063 LDB2O43679 373 aa3.27□□□□□ -1.89
TCOF1-208ENST00000506063 CLDN11O75508 207 aa3.27□□□□□ -1.89
TCOF1-208ENST00000506063 UBXN7O94888 489 aa3.27□□□□□ -1.89
TCOF1-208ENST00000506063 ALX3O95076 343 aa3.27□□□□□ -1.89
TCOF1-208ENST00000506063 GCNT3O95395 438 aa3.27□□□□□ -1.89
TCOF1-208ENST00000506063 LCA5LO95447 670 aa3.27□□□□□ -1.89
TCOF1-208ENST00000506063 GSRP00390 522 aa3.27□□□□□ -1.89
TCOF1-208ENST00000506063 SOD1P00441 154 aa3.27□□□□□ -1.89
TCOF1-208ENST00000506063 CRYABP02511 175 aaKnown RBP3.27□□□□□ -1.89
TCOF1-208ENST00000506063 PVRP15151 417 aa3.27□□□□□ -1.89
TCOF1-208ENST00000506063 ZNF30P17039 623 aa3.27□□□□□ -1.89
TCOF1-208ENST00000506063 BMP7P18075 431 aa3.27□□□□□ -1.89
TCOF1-208ENST00000506063 SOX18P35713 384 aa3.27□□□□□ -1.89
TCOF1-208ENST00000506063 CAPZBP47756 277 aa3.27□□□□□ -1.89
TCOF1-208ENST00000506063 DNA2P51530 1060 aa3.27□□□□□ -1.89
TCOF1-208ENST00000506063 ARSEP51690 589 aa3.27□□□□□ -1.89
TCOF1-208ENST00000506063 CDH4P55283 916 aa3.27□□□□□ -1.89
TCOF1-208ENST00000506063 CDK3Q00526 305 aa3.27□□□□□ -1.89
TCOF1-208ENST00000506063 HSF1Q00613 529 aa3.27□□□□□ -1.89
TCOF1-208ENST00000506063 PDE1BQ01064 536 aa3.27□□□□□ -1.89
TCOF1-208ENST00000506063 DAZAP2Q15038 168 aaPredicted RBP3.27□□□□□ -1.89
TCOF1-208ENST00000506063 GPR19Q15760 415 aa3.27□□□□□ -1.89
TCOF1-208ENST00000506063 SEPT7Q16181 437 aaKnown RBP3.27□□□□□ -1.89
TCOF1-208ENST00000506063 UGP2Q16851 508 aa3.27□□□□□ -1.89
TCOF1-208ENST00000506063 CHRFAM7AQ494W8 412 aa3.27□□□□□ -1.89
TCOF1-208ENST00000506063 ZNF394Q53GI3 561 aa3.27□□□□□ -1.89
TCOF1-208ENST00000506063 PYCR3Q53H96 274 aa3.27□□□□□ -1.89
TCOF1-208ENST00000506063 ATXN7L2Q5T6C5 722 aaPredicted RBP3.27□□□□□ -1.89
TCOF1-208ENST00000506063 CACHD1Q5VU97 1274 aa3.27□□□□□ -1.89
TCOF1-208ENST00000506063 OTUD1Q5VV17 481 aaPredicted RBP3.27□□□□□ -1.89
TCOF1-208ENST00000506063 PMF1Q6P1K2 205 aa3.27□□□□□ -1.89
TCOF1-208ENST00000506063 FBXO38Q6PIJ6 1188 aa3.27□□□□□ -1.89
TCOF1-208ENST00000506063 ARSKQ6UWY0 536 aa3.27□□□□□ -1.89
TCOF1-208ENST00000506063 ISLR2Q6UXK2 745 aa3.27□□□□□ -1.89
TCOF1-208ENST00000506063 GDPD4Q6W3E5 623 aa3.27□□□□□ -1.89
TCOF1-208ENST00000506063 LIPIQ6XZB0 460 aa3.27□□□□□ -1.89
TCOF1-208ENST00000506063 LINC00696Q6ZRV3 163 aa3.27□□□□□ -1.89
TCOF1-208ENST00000506063 FAM92BQ6ZTR7 304 aa3.27□□□□□ -1.89
TCOF1-208ENST00000506063 TMEM26Q6ZUK4 368 aa3.27□□□□□ -1.89
TCOF1-208ENST00000506063 CCDC71Q8IV32 467 aaPredicted RBP3.27□□□□□ -1.89
TCOF1-208ENST00000506063 D2HGDHQ8N465 521 aa3.27□□□□□ -1.89
TCOF1-208ENST00000506063 MAPK1IP1LQ8NDC0 245 aa3.27□□□□□ -1.89
TCOF1-208ENST00000506063 OR2AP1Q8NGE2 309 aa3.27□□□□□ -1.89
TCOF1-208ENST00000506063 PPP1R14CQ8TAE6 165 aa3.27□□□□□ -1.89
TCOF1-208ENST00000506063 PARD3BQ8TEW8 1205 aa3.27□□□□□ -1.89
TCOF1-208ENST00000506063 SLC35F5Q8WV83 523 aa3.27□□□□□ -1.89
TCOF1-208ENST00000506063 ASB5Q8WWX0 329 aa3.27□□□□□ -1.89
TCOF1-208ENST00000506063 IRGQQ8WZA9 623 aa3.27□□□□□ -1.89
TCOF1-208ENST00000506063 HAS2Q92819 552 aa3.27□□□□□ -1.89
TCOF1-208ENST00000506063 ARHGEF2Q92974 986 aaKnown RBP3.27□□□□□ -1.89
TCOF1-208ENST00000506063 RNF25Q96BH1 459 aaPredicted RBP3.27□□□□□ -1.89
TCOF1-208ENST00000506063 HMCESQ96FZ2 354 aa3.27□□□□□ -1.89
TCOF1-208ENST00000506063 MAGED4Q96JG8 741 aa3.27□□□□□ -1.89
TCOF1-208ENST00000506063 RPRD1AQ96P16 312 aaPredicted RBP3.27□□□□□ -1.89
TCOF1-208ENST00000506063 IPO9Q96P70 1041 aaKnown RBP3.27□□□□□ -1.89
TCOF1-208ENST00000506063 OR2M4Q96R27 311 aa3.27□□□□□ -1.89
TCOF1-208ENST00000506063 PPP1R9BQ96SB3 815 aa3.27□□□□□ -1.89
TCOF1-208ENST00000506063 PIP5K1AQ99755 562 aa3.27□□□□□ -1.89
TCOF1-208ENST00000506063 MESP1Q9BRJ9 268 aa3.27□□□□□ -1.89
TCOF1-208ENST00000506063 OSBPL1AQ9BXW6 950 aa3.27□□□□□ -1.89
TCOF1-208ENST00000506063 RAB33BQ9H082 229 aa3.27□□□□□ -1.89
TCOF1-208ENST00000506063 MUC3BQ9H195 1237 aa3.27□□□□□ -1.89
TCOF1-208ENST00000506063 TSPAN10Q9H1Z9 355 aaPredicted RBP3.27□□□□□ -1.89
TCOF1-208ENST00000506063 EPS8L2Q9H6S3 715 aa3.27□□□□□ -1.89
TCOF1-208ENST00000506063 CYP3A43Q9HB55 503 aa3.27□□□□□ -1.89
TCOF1-208ENST00000506063 LRTM1Q9HBL6 345 aa3.27□□□□□ -1.89
TCOF1-208ENST00000506063 LRRC4Q9HBW1 653 aa3.27□□□□□ -1.89
TCOF1-208ENST00000506063 KCNJ16Q9NPI9 418 aa3.27□□□□□ -1.89
TCOF1-208ENST00000506063 EIF4ENIF1Q9NRA8 985 aaKnown RBP3.27□□□□□ -1.89
TCOF1-208ENST00000506063 PLA2G3Q9NZ20 509 aa3.27□□□□□ -1.89
TCOF1-208ENST00000506063 COQ3Q9NZJ6 369 aa3.27□□□□□ -1.89
TCOF1-208ENST00000506063 CPNE7Q9UBL6 633 aa3.27□□□□□ -1.89
TCOF1-208ENST00000506063 VANGL2Q9ULK5 521 aa3.27□□□□□ -1.89
TCOF1-208ENST00000506063 NOTCH3Q9UM47 2321 aa3.26□□□□□ -1.89
TCOF1-208ENST00000506063 CXorf51AA0A1B0GTR3 108 aa3.26□□□□□ -1.89
TCOF1-208ENST00000506063 C17orf113A0A1B0GUU1 675 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms