RNA–Protein interactions for RNA: ENST00000505074.5

PDLIM7-213, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 931 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-213ENST00000505074 A0A0J9YYE9 177 aa15.89■□□□□ 0.13
PDLIM7-213ENST00000505074 TTLL8A6PVC2 850 aa15.89■□□□□ 0.13
PDLIM7-213ENST00000505074 MATN3O15232 486 aa15.89■□□□□ 0.13
PDLIM7-213ENST00000505074 INPP4BO15327 924 aa15.89■□□□□ 0.13
PDLIM7-213ENST00000505074 SEMA7AO75326 666 aa15.89■□□□□ 0.13
PDLIM7-213ENST00000505074 DDAH2O95865 285 aa15.89■□□□□ 0.13
PDLIM7-213ENST00000505074 TRBC1P01850 177 aa15.89■□□□□ 0.13
PDLIM7-213ENST00000505074 FUCA1P04066 466 aa15.89■□□□□ 0.13
PDLIM7-213ENST00000505074 GYPCP04921 128 aa15.89■□□□□ 0.13
PDLIM7-213ENST00000505074 TPM3P06753 285 aa15.89■□□□□ 0.13
PDLIM7-213ENST00000505074 IVLP07476 585 aa15.89■□□□□ 0.13
PDLIM7-213ENST00000505074 ZNF30P17039 623 aa15.89■□□□□ 0.13
PDLIM7-213ENST00000505074 IL4RP24394 825 aa15.89■□□□□ 0.13
PDLIM7-213ENST00000505074 MPSTP25325 297 aa15.89■□□□□ 0.13
PDLIM7-213ENST00000505074 CASP14P31944 242 aa15.89■□□□□ 0.13
PDLIM7-213ENST00000505074 RIPPLY3P57055 190 aa15.89■□□□□ 0.13
PDLIM7-213ENST00000505074 PAFAH1B3Q15102 231 aaKnown RBP15.89■□□□□ 0.13
PDLIM7-213ENST00000505074 ANKRD20A8PQ5CZ79 823 aa15.89■□□□□ 0.13
PDLIM7-213ENST00000505074 TECPR1Q7Z6L1 1165 aa15.89■□□□□ 0.13
PDLIM7-213ENST00000505074 CPNE8Q86YQ8 564 aa15.89■□□□□ 0.13
PDLIM7-213ENST00000505074 GALNT13Q8IUC8 556 aa15.89■□□□□ 0.13
PDLIM7-213ENST00000505074 SCAMP4Q969E2 229 aa15.89■□□□□ 0.13
PDLIM7-213ENST00000505074 RTP4Q96DX8 246 aa15.89■□□□□ 0.13
PDLIM7-213ENST00000505074 ZNF830Q96NB3 372 aaPredicted RBP15.89■□□□□ 0.13
PDLIM7-213ENST00000505074 ZNF670Q9BS34 389 aa15.89■□□□□ 0.13
PDLIM7-213ENST00000505074 SPRY4Q9C004 299 aa15.89■□□□□ 0.13
PDLIM7-213ENST00000505074 TRIT1Q9H3H1 467 aaKnown RBP15.89■□□□□ 0.13
PDLIM7-213ENST00000505074 DEF6Q9H4E7 631 aa15.89■□□□□ 0.13
PDLIM7-213ENST00000505074 DNPEPQ9ULA0 475 aa15.89■□□□□ 0.13
PDLIM7-213ENST00000505074 SLC17A4Q9Y2C5 497 aa15.89■□□□□ 0.13
PDLIM7-213ENST00000505074 PLEKHM1Q9Y4G2 1056 aa15.89■□□□□ 0.13
PDLIM7-213ENST00000505074 PCDHB3Q9Y5E6 796 aa15.89■□□□□ 0.13
PDLIM7-213ENST00000505074 K7EM74 188 aa15.88■□□□□ 0.13
PDLIM7-213ENST00000505074 PROSCO94903 275 aa15.88■□□□□ 0.13
PDLIM7-213ENST00000505074 PYGLP06737 847 aa15.88■□□□□ 0.13
PDLIM7-213ENST00000505074 MX2P20592 715 aa15.88■□□□□ 0.13
PDLIM7-213ENST00000505074 TEAD1P28347 426 aa15.88■□□□□ 0.13
PDLIM7-213ENST00000505074 NOP2P46087 812 aaKnown RBP15.88■□□□□ 0.13
PDLIM7-213ENST00000505074 DPTQ07507 201 aa15.88■□□□□ 0.13
PDLIM7-213ENST00000505074 SQSTM1Q13501 440 aa15.88■□□□□ 0.13
PDLIM7-213ENST00000505074 PDK2Q15119 407 aa15.88■□□□□ 0.13
PDLIM7-213ENST00000505074 ATP1A1-AS1Q5TC04 95 aa15.88■□□□□ 0.13
PDLIM7-213ENST00000505074 NKAIN2Q5VXU1 208 aa15.88■□□□□ 0.13
PDLIM7-213ENST00000505074 CEACAM20Q6UY09 585 aa15.88■□□□□ 0.13
PDLIM7-213ENST00000505074 ADAMTSL4Q6UY14 1074 aa15.88■□□□□ 0.13
PDLIM7-213ENST00000505074 CPT1CQ8TCG5 803 aa15.88■□□□□ 0.13
PDLIM7-213ENST00000505074 ZPBPQ9BS86 351 aa15.88■□□□□ 0.13
PDLIM7-213ENST00000505074 RIOK2Q9BVS4 552 aaKnown RBP15.88■□□□□ 0.13
PDLIM7-213ENST00000505074 TDRD1Q9BXT4 1180 aaKnown RBP15.88■□□□□ 0.13
PDLIM7-213ENST00000505074 PCDH9Q9HC56 1237 aa15.88■□□□□ 0.13
PDLIM7-213ENST00000505074 UVRAGQ9P2Y5 699 aa15.88■□□□□ 0.13
PDLIM7-213ENST00000505074 PPIL1Q9Y3C6 166 aa15.88■□□□□ 0.13
PDLIM7-213ENST00000505074 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.88■□□□□ 0.132e-7■□□□□ 11.2
PDLIM7-213ENST00000505074 RP1L1Q8IWN7 2480 aaPredicted RBP15.88■□□□□ 0.13
PDLIM7-213ENST00000505074 TRBV23OR9-2A0A075B6M9 112 aa15.87■□□□□ 0.13
PDLIM7-213ENST00000505074 IGHV1OR21-1A0A087WYE8 117 aa15.87■□□□□ 0.13
PDLIM7-213ENST00000505074 C1orf232A0A0U1RR37 186 aa15.87■□□□□ 0.13
PDLIM7-213ENST00000505074 FZD6O60353 706 aa15.87■□□□□ 0.13
PDLIM7-213ENST00000505074 CLDN7O95471 211 aa15.87■□□□□ 0.13
PDLIM7-213ENST00000505074 SOD1P00441 154 aa15.87■□□□□ 0.13
PDLIM7-213ENST00000505074 HLA-DQB2P05538 268 aa15.87■□□□□ 0.13
PDLIM7-213ENST00000505074 H2AFZP0C0S5 128 aa15.87■□□□□ 0.13
PDLIM7-213ENST00000505074 RNF224P0DH78 156 aa15.87■□□□□ 0.13
PDLIM7-213ENST00000505074 CES1P23141 567 aa15.87■□□□□ 0.13
PDLIM7-213ENST00000505074 CCNCP24863 283 aa15.87■□□□□ 0.13
PDLIM7-213ENST00000505074 ARSEP51690 589 aa15.87■□□□□ 0.13
PDLIM7-213ENST00000505074 STC1P52823 247 aa15.87■□□□□ 0.13
PDLIM7-213ENST00000505074 TAS2R40P59535 323 aa15.87■□□□□ 0.13
PDLIM7-213ENST00000505074 PTSQ03393 145 aa15.87■□□□□ 0.13
PDLIM7-213ENST00000505074 GBE1Q04446 702 aa15.87■□□□□ 0.13
PDLIM7-213ENST00000505074 TMEM71Q6P5X7 295 aa15.87■□□□□ 0.13
PDLIM7-213ENST00000505074 H2AFVQ71UI9 128 aa15.87■□□□□ 0.13
PDLIM7-213ENST00000505074 MAMDC2Q7Z304 686 aaPredicted RBP15.87■□□□□ 0.13
PDLIM7-213ENST00000505074 TIPARPQ7Z3E1 657 aaKnown RBP15.87■□□□□ 0.13
PDLIM7-213ENST00000505074 NAGSQ8N159 534 aa15.87■□□□□ 0.13
PDLIM7-213ENST00000505074 CBARPQ8N350 705 aaPredicted RBP15.87■□□□□ 0.13
PDLIM7-213ENST00000505074 BMPERQ8N8U9 685 aa15.87■□□□□ 0.13
PDLIM7-213ENST00000505074 EXD1Q8NHP7 514 aa15.87■□□□□ 0.13
PDLIM7-213ENST00000505074 FAM71BQ8TC56 605 aa15.87■□□□□ 0.13
PDLIM7-213ENST00000505074 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.87■□□□□ 0.13
PDLIM7-213ENST00000505074 MAML1Q92585 1016 aa15.87■□□□□ 0.13
PDLIM7-213ENST00000505074 AHCYL2Q96HN2 611 aaKnown RBP15.87■□□□□ 0.13
PDLIM7-213ENST00000505074 PHF12Q96QT6 1004 aa15.87■□□□□ 0.13
PDLIM7-213ENST00000505074 AGAP2Q99490 1192 aa15.87■□□□□ 0.13
PDLIM7-213ENST00000505074 CTRCQ99895 268 aa15.87■□□□□ 0.13
PDLIM7-213ENST00000505074 PACSIN1Q9BY11 444 aa15.87■□□□□ 0.13
PDLIM7-213ENST00000505074 ZNHIT2Q9UHR6 403 aa15.87■□□□□ 0.13
PDLIM7-213ENST00000505074 CENPEQ02224 2701 aa15.87■□□□□ 0.13
PDLIM7-213ENST00000505074 ZNF106Q9H2Y7 1883 aaKnown RBP15.86■□□□□ 0.13
PDLIM7-213ENST00000505074 COL8A1P27658 744 aa15.86■□□□□ 0.13
PDLIM7-213ENST00000505074 TNFRSF8P28908 595 aa15.86■□□□□ 0.13
PDLIM7-213ENST00000505074 CSF2RBP32927 897 aa15.86■□□□□ 0.13
PDLIM7-213ENST00000505074 DCTP40126 519 aa15.86■□□□□ 0.13
PDLIM7-213ENST00000505074 MC2RQ01718 297 aa15.86■□□□□ 0.13
PDLIM7-213ENST00000505074 MESDQ14696 234 aa15.86■□□□□ 0.13
PDLIM7-213ENST00000505074 ODF2Q5BJF6 829 aa15.86■□□□□ 0.13
PDLIM7-213ENST00000505074 ZNF765Q7L2R6 523 aa15.86■□□□□ 0.13
PDLIM7-213ENST00000505074 TICAM1Q8IUC6 712 aa15.86■□□□□ 0.13
PDLIM7-213ENST00000505074 PKD2L2Q9NZM6 624 aa15.86■□□□□ 0.13
PDLIM7-213ENST00000505074 TMEM9Q9P0T7 183 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms