RNA–Protein interactions for RNA: ENST00000502781.5

LSM6-202, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 1,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-202ENST00000502781 ZNF592Q92610 1267 aa24.88■■□□□ 1.57
LSM6-202ENST00000502781 CDKN2AIPNLQ96HQ2 116 aa24.88■■□□□ 1.57
LSM6-202ENST00000502781 CARS2Q9HA77 564 aaKnown RBP24.88■■□□□ 1.57
LSM6-202ENST00000502781 UGT1A7Q9HAW7 530 aa24.88■■□□□ 1.57
LSM6-202ENST00000502781 UGT1A10Q9HAW8 530 aa24.88■■□□□ 1.57
LSM6-202ENST00000502781 UGT1A8Q9HAW9 530 aa24.88■■□□□ 1.57
LSM6-202ENST00000502781 TRNAU1APQ9NX07 287 aaKnown RBP24.88■■□□□ 1.57
LSM6-202ENST00000502781 ATXN10Q9UBB4 475 aa24.88■■□□□ 1.57
LSM6-202ENST00000502781 TDRD6O60522 2096 aaKnown RBP24.88■■□□□ 1.57
LSM6-202ENST00000502781 ZNF106Q9H2Y7 1883 aaKnown RBP24.88■■□□□ 1.57
LSM6-202ENST00000502781 DCDC2BA2VCK2 349 aa24.87■■□□□ 1.57
LSM6-202ENST00000502781 LMO7DNF2Z398 122 aa24.87■■□□□ 1.57
LSM6-202ENST00000502781 CCL22O00626 93 aa24.87■■□□□ 1.57
LSM6-202ENST00000502781 TPP1O14773 563 aa24.87■■□□□ 1.57
LSM6-202ENST00000502781 MAGEA3P43357 314 aa24.87■■□□□ 1.57
LSM6-202ENST00000502781 ARSDP51689 593 aa24.87■■□□□ 1.57
LSM6-202ENST00000502781 TMPRSS15P98073 1019 aa24.87■■□□□ 1.57
LSM6-202ENST00000502781 NFATC2Q13469 925 aa24.87■■□□□ 1.57
LSM6-202ENST00000502781 C1orf61Q13536 156 aa24.87■■□□□ 1.57
LSM6-202ENST00000502781 ELOCQ15369 112 aa24.87■■□□□ 1.57
LSM6-202ENST00000502781 WHAMMP3Q1A5X7 153 aa24.87■■□□□ 1.57
LSM6-202ENST00000502781 KHDC1Q4VXA5 237 aaKnown RBP24.87■■□□□ 1.57
LSM6-202ENST00000502781 PYCR3Q53H96 274 aa24.87■■□□□ 1.57
LSM6-202ENST00000502781 TSTD2Q5T7W7 516 aa24.87■■□□□ 1.57
LSM6-202ENST00000502781 ADGRG6Q86SQ4 1221 aa24.87■■□□□ 1.57
LSM6-202ENST00000502781 DDHD1Q8NEL9 900 aa24.87■■□□□ 1.57
LSM6-202ENST00000502781 ZNF778Q96MU6 729 aa24.87■■□□□ 1.57
LSM6-202ENST00000502781 TRIM51Q9BSJ1 452 aa24.87■■□□□ 1.57
LSM6-202ENST00000502781 TMEM168Q9H0V1 697 aa24.87■■□□□ 1.57
LSM6-202ENST00000502781 SLC32A1Q9H598 525 aa24.87■■□□□ 1.57
LSM6-202ENST00000502781 RMI1Q9H9A7 625 aa24.87■■□□□ 1.57
LSM6-202ENST00000502781 XAB2Q9HCS7 855 aaKnown RBP24.87■■□□□ 1.57
LSM6-202ENST00000502781 NLGN3Q9NZ94 848 aa24.87■■□□□ 1.57
LSM6-202ENST00000502781 GPR89AB7ZAQ6 455 aa24.86■■□□□ 1.57
LSM6-202ENST00000502781 TRIM38O00635 465 aa24.86■■□□□ 1.57
LSM6-202ENST00000502781 ASMTLO95671 621 aa24.86■■□□□ 1.57
LSM6-202ENST00000502781 CELA2BP08218 269 aaPredicted RBP24.86■■□□□ 1.57
LSM6-202ENST00000502781 GPR89BP0CG08 455 aa24.86■■□□□ 1.57
LSM6-202ENST00000502781 CEACAM1P13688 526 aa24.86■■□□□ 1.57
LSM6-202ENST00000502781 CKAP4Q07065 602 aaKnown RBP24.86■■□□□ 1.57
LSM6-202ENST00000502781 C2orf54Q08AI8 447 aa24.86■■□□□ 1.57
LSM6-202ENST00000502781 TUBB2AQ13885 445 aa24.86■■□□□ 1.57
LSM6-202ENST00000502781 HOOK3Q86VS8 718 aa24.86■■□□□ 1.57
LSM6-202ENST00000502781 EID2Q8N6I1 236 aa24.86■■□□□ 1.57
LSM6-202ENST00000502781 SERPINB12Q96P63 405 aa24.86■■□□□ 1.57
LSM6-202ENST00000502781 TUBB2BQ9BVA1 445 aa24.86■■□□□ 1.57
LSM6-202ENST00000502781 KIFC1Q9BW19 673 aa24.86■■□□□ 1.57
LSM6-202ENST00000502781 ARFGAP3Q9NP61 516 aa24.86■■□□□ 1.57
LSM6-202ENST00000502781 MOSPD1Q9UJG1 213 aa24.86■■□□□ 1.57
LSM6-202ENST00000502781 PCYT1BQ9Y5K3 369 aaPredicted RBP24.86■■□□□ 1.57
LSM6-202ENST00000502781 MRFAP1Q9Y605 127 aa24.86■■□□□ 1.57
LSM6-202ENST00000502781 DCHS1Q96JQ0 3298 aa24.85■■□□□ 1.57
LSM6-202ENST00000502781 TRBV5-4A0A0C4DH59 114 aa24.85■■□□□ 1.57
LSM6-202ENST00000502781 CHUKO15111 745 aa24.85■■□□□ 1.57
LSM6-202ENST00000502781 NUAK1O60285 661 aa24.85■■□□□ 1.57
LSM6-202ENST00000502781 AVILO75366 819 aa24.85■■□□□ 1.57
LSM6-202ENST00000502781 KCNK5O95279 499 aa24.85■■□□□ 1.57
LSM6-202ENST00000502781 CTSEP14091 401 aa24.85■■□□□ 1.57
LSM6-202ENST00000502781 MGAT1P26572 445 aa24.85■■□□□ 1.57
LSM6-202ENST00000502781 CRADDP78560 199 aa24.85■■□□□ 1.57
LSM6-202ENST00000502781 ZNF648Q5T619 568 aaPredicted RBP24.85■■□□□ 1.57
LSM6-202ENST00000502781 GPRC6AQ5T6X5 926 aa24.85■■□□□ 1.57
LSM6-202ENST00000502781 SNX20Q7Z614 316 aa24.85■■□□□ 1.57
LSM6-202ENST00000502781 PCGF5Q86SE9 256 aa24.85■■□□□ 1.57
LSM6-202ENST00000502781 GLRX5Q86SX6 157 aa24.85■■□□□ 1.57
LSM6-202ENST00000502781 PPHLN1Q8NEY8 458 aaKnown RBP24.85■■□□□ 1.57
LSM6-202ENST00000502781 KIF18AQ8NI77 898 aa24.85■■□□□ 1.57
LSM6-202ENST00000502781 GPBAR1Q8TDU6 330 aa24.85■■□□□ 1.57
LSM6-202ENST00000502781 OR2AG1Q9H205 316 aa24.85■■□□□ 1.57
LSM6-202ENST00000502781 ASB8Q9H765 288 aa24.85■■□□□ 1.57
LSM6-202ENST00000502781 SUDS3Q9H7L9 328 aaPredicted RBP24.85■■□□□ 1.57
LSM6-202ENST00000502781 MRM3Q9HC36 420 aaKnown RBP24.85■■□□□ 1.57
LSM6-202ENST00000502781 CHRAC1Q9NRG0 131 aa24.85■■□□□ 1.57
LSM6-202ENST00000502781 SYBUQ9NX95 663 aa24.85■■□□□ 1.57
LSM6-202ENST00000502781 SLC2A6Q9UGQ3 507 aa24.85■■□□□ 1.57
LSM6-202ENST00000502781 COL5A1P20908 1838 aaPredicted RBP24.84■■□□□ 1.57
LSM6-202ENST00000502781 FAM187AA6NFU0 413 aa24.84■■□□□ 1.57
LSM6-202ENST00000502781 YY2O15391 372 aa24.84■■□□□ 1.57
LSM6-202ENST00000502781 VEGFDO43915 354 aa24.84■■□□□ 1.57
LSM6-202ENST00000502781 ZNF8P17098 575 aaPredicted RBP24.84■■□□□ 1.57
LSM6-202ENST00000502781 ITGALP20701 1170 aa24.84■■□□□ 1.57
LSM6-202ENST00000502781 MC4RP32245 332 aa24.84■■□□□ 1.57
LSM6-202ENST00000502781 GNPDA1P46926 289 aa24.84■■□□□ 1.57
LSM6-202ENST00000502781 GPR33Q49SQ1 333 aa24.84■■□□□ 1.57
LSM6-202ENST00000502781 LDLRAP1Q5SW96 308 aa24.84■■□□□ 1.57
LSM6-202ENST00000502781 LVRNQ6Q4G3 990 aa24.84■■□□□ 1.57
LSM6-202ENST00000502781 MARK2Q7KZI7 788 aaKnown RBP24.84■■□□□ 1.57
LSM6-202ENST00000502781 MAATS1Q7Z4T9 603 aa24.84■■□□□ 1.57
LSM6-202ENST00000502781 OR2M4Q96R27 311 aa24.84■■□□□ 1.57
LSM6-202ENST00000502781 CDC6Q99741 560 aa24.84■■□□□ 1.57
LSM6-202ENST00000502781 DUSP23Q9BVJ7 150 aa24.84■■□□□ 1.57
LSM6-202ENST00000502781 TREX1Q9NSU2 369 aa24.84■■□□□ 1.57
LSM6-202ENST00000502781 ST14Q9Y5Y6 855 aa24.84■■□□□ 1.57
LSM6-202ENST00000502781 CCDC78A2IDD5 438 aa24.83■■□□□ 1.57
LSM6-202ENST00000502781 TP73O15350 636 aa24.83■■□□□ 1.57
LSM6-202ENST00000502781 FFAR2O15552 330 aa24.83■■□□□ 1.57
LSM6-202ENST00000502781 RAD51CO43502 376 aa24.83■■□□□ 1.57
LSM6-202ENST00000502781 SIGLEC6O43699 453 aa24.83■■□□□ 1.57
LSM6-202ENST00000502781 MTX2O75431 263 aa24.83■■□□□ 1.57
LSM6-202ENST00000502781 NOVA1P51513 510 aaKnown RBP24.83■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms