RNA–Protein interactions for RNA: ENST00000502422.5

MATR3-202, Transcript of matrin 3, humanhuman

TSL 1 (best)

Gene MATR3, Length 2,250 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-202ENST00000502422 C12orf49Q9H741 205 aa4.52□□□□□ -1.69
MATR3-202ENST00000502422 LIN28AQ9H9Z2 209 aaKnown RBP4.52□□□□□ -1.69
MATR3-202ENST00000502422 MAGEF1Q9HAY2 307 aa4.52□□□□□ -1.69
MATR3-202ENST00000502422 S100A14Q9HCY8 104 aa4.52□□□□□ -1.69
MATR3-202ENST00000502422 TLR8Q9NR97 1041 aaKnown RBP4.52□□□□□ -1.69
MATR3-202ENST00000502422 UVRAGQ9P2Y5 699 aa4.52□□□□□ -1.69
MATR3-202ENST00000502422 THAP10Q9P2Z0 257 aaPredicted RBP4.52□□□□□ -1.69
MATR3-202ENST00000502422 NXF1Q9UBU9 619 aaKnown RBP4.52□□□□□ -1.69
MATR3-202ENST00000502422 IL17BQ9UHF5 180 aa4.52□□□□□ -1.69
MATR3-202ENST00000502422 ITM2BQ9Y287 266 aa4.52□□□□□ -1.69
MATR3-202ENST00000502422 SBDSQ9Y3A5 250 aaKnown RBP eCLIP4.52□□□□□ -1.69
MATR3-202ENST00000502422 CFAP46Q8IYW2 2715 aa4.52□□□□□ -1.69
MATR3-202ENST00000502422 HECTD1Q9ULT8 2610 aa4.51□□□□□ -1.69
MATR3-202ENST00000502422 MYOCOSA0A1B0GUC4 107 aa4.51□□□□□ -1.69
MATR3-202ENST00000502422 CAPN14A8MX76 684 aa4.51□□□□□ -1.69
MATR3-202ENST00000502422 CLDN5O00501 218 aa4.51□□□□□ -1.69
MATR3-202ENST00000502422 CASQ2O14958 399 aaPredicted RBP4.51□□□□□ -1.69
MATR3-202ENST00000502422 ITM2AO43736 263 aa4.51□□□□□ -1.69
MATR3-202ENST00000502422 DNAJA2O60884 412 aa4.51□□□□□ -1.69
MATR3-202ENST00000502422 IGLV3-19P01714 112 aa4.51□□□□□ -1.69
MATR3-202ENST00000502422 CYBBP04839 570 aa4.51□□□□□ -1.69
MATR3-202ENST00000502422 H2AFZP0C0S5 128 aa4.51□□□□□ -1.69
MATR3-202ENST00000502422 CISD3P0C7P0 127 aa4.51□□□□□ -1.69
MATR3-202ENST00000502422 PABPC1P11940 636 aaKnown RBP4.51□□□□□ -1.69
MATR3-202ENST00000502422 KRT13P13646 458 aa4.51□□□□□ -1.69
MATR3-202ENST00000502422 EPB42P16452 691 aa4.51□□□□□ -1.69
MATR3-202ENST00000502422 ENDOUP21128 410 aaKnown RBP4.51□□□□□ -1.69
MATR3-202ENST00000502422 ACO1P21399 889 aaKnown RBP4.51□□□□□ -1.69
MATR3-202ENST00000502422 WARSP23381 471 aaKnown RBP4.51□□□□□ -1.69
MATR3-202ENST00000502422 RCVRNP35243 200 aa4.51□□□□□ -1.69
MATR3-202ENST00000502422 RPA3P35244 121 aaPredicted RBP4.51□□□□□ -1.69
MATR3-202ENST00000502422 COILP38432 576 aaPredicted RBP4.51□□□□□ -1.69
MATR3-202ENST00000502422 CETN2P41208 172 aa4.51□□□□□ -1.69
MATR3-202ENST00000502422 CTSKP43235 329 aa4.51□□□□□ -1.69
MATR3-202ENST00000502422 KCNJ1P48048 391 aa4.51□□□□□ -1.69
MATR3-202ENST00000502422 CPA2P48052 419 aa4.51□□□□□ -1.69
MATR3-202ENST00000502422 MARCKSL1P49006 195 aa4.51□□□□□ -1.69
MATR3-202ENST00000502422 TMED10P49755 219 aaKnown RBP4.51□□□□□ -1.69
MATR3-202ENST00000502422 SLC5A3P53794 718 aa4.51□□□□□ -1.69
MATR3-202ENST00000502422 RACK1P63244 317 aaKnown RBP4.51□□□□□ -1.69
MATR3-202ENST00000502422 COG7P83436 770 aa4.51□□□□□ -1.69
MATR3-202ENST00000502422 FOLH1Q04609 750 aa4.51□□□□□ -1.69
MATR3-202ENST00000502422 ILKQ13418 452 aa4.51□□□□□ -1.69
MATR3-202ENST00000502422 GK3PQ14409 553 aa4.51□□□□□ -1.69
MATR3-202ENST00000502422 ZNF234Q14588 700 aa4.51□□□□□ -1.69
MATR3-202ENST00000502422 SURF1Q15526 300 aa4.51□□□□□ -1.69
MATR3-202ENST00000502422 DUOXA2Q1HG44 320 aa4.51□□□□□ -1.69
MATR3-202ENST00000502422 LRRC36Q1X8D7 754 aa4.51□□□□□ -1.69
MATR3-202ENST00000502422 ARL13BQ3SXY8 428 aa4.51□□□□□ -1.69
MATR3-202ENST00000502422 MMEL1Q495T6 779 aa4.51□□□□□ -1.69
MATR3-202ENST00000502422 IL23RQ5VWK5 629 aa4.51□□□□□ -1.69
MATR3-202ENST00000502422 SPOPLQ6IQ16 392 aa4.51□□□□□ -1.69
MATR3-202ENST00000502422 AAGABQ6PD74 315 aa4.51□□□□□ -1.69
MATR3-202ENST00000502422 FIGNL1Q6PIW4 674 aa4.51□□□□□ -1.69
MATR3-202ENST00000502422 CCDC137Q6PK04 289 aaKnown RBP4.51□□□□□ -1.69
MATR3-202ENST00000502422 H2AFVQ71UI9 128 aa4.51□□□□□ -1.69
MATR3-202ENST00000502422 ZNF720Q7Z2F6 126 aa4.51□□□□□ -1.69
MATR3-202ENST00000502422 PEX5LQ8IYB4 626 aa4.51□□□□□ -1.69
MATR3-202ENST00000502422 LSMEM2Q8N112 164 aa4.51□□□□□ -1.69
MATR3-202ENST00000502422 PPM1KQ8N3J5 372 aa4.51□□□□□ -1.69
MATR3-202ENST00000502422 SLC25A41Q8N5S1 370 aa4.51□□□□□ -1.69
MATR3-202ENST00000502422 RBM15BQ8NDT2 890 aaKnown RBP4.51□□□□□ -1.69
MATR3-202ENST00000502422 OR2T3Q8NH03 318 aa4.51□□□□□ -1.69
MATR3-202ENST00000502422 SCAMP5Q8TAC9 235 aa4.51□□□□□ -1.69
MATR3-202ENST00000502422 SLC35G2Q8TBE7 412 aa4.51□□□□□ -1.69
MATR3-202ENST00000502422 ACTRT2Q8TDY3 377 aa4.51□□□□□ -1.69
MATR3-202ENST00000502422 GANCQ8TET4 914 aa4.51□□□□□ -1.69
MATR3-202ENST00000502422 KCNE4Q8WWG9 221 aa4.51□□□□□ -1.69
MATR3-202ENST00000502422 KRT35Q92764 455 aa4.51□□□□□ -1.69
MATR3-202ENST00000502422 GTPBP3Q969Y2 492 aaKnown RBP4.51□□□□□ -1.69
MATR3-202ENST00000502422 ARHGEF26Q96DR7 871 aa4.51□□□□□ -1.69
MATR3-202ENST00000502422 ZNF578Q96N58 590 aaPredicted RBP4.51□□□□□ -1.69
MATR3-202ENST00000502422 BTBD9Q96Q07 612 aa4.51□□□□□ -1.69
MATR3-202ENST00000502422 ACCSQ96QU6 501 aa4.51□□□□□ -1.69
MATR3-202ENST00000502422 RANBP9Q96S59 729 aa4.51□□□□□ -1.69
MATR3-202ENST00000502422 SYT11Q9BT88 431 aa4.51□□□□□ -1.69
MATR3-202ENST00000502422 MRPS26Q9BYN8 205 aaKnown RBP4.51□□□□□ -1.69
MATR3-202ENST00000502422 LHX5Q9H2C1 402 aa4.51□□□□□ -1.69
MATR3-202ENST00000502422 ST6GALNAC4Q9H4F1 302 aa4.51□□□□□ -1.69
MATR3-202ENST00000502422 FBXO44Q9H4M3 255 aa4.51□□□□□ -1.69
MATR3-202ENST00000502422 PCIF1Q9H4Z3 704 aa4.51□□□□□ -1.69
MATR3-202ENST00000502422 ENAMQ9NRM1 1142 aa4.51□□□□□ -1.69
MATR3-202ENST00000502422 BLOC1S4Q9NUP1 217 aa4.51□□□□□ -1.69
MATR3-202ENST00000502422 ELOVL2Q9NXB9 296 aa4.51□□□□□ -1.69
MATR3-202ENST00000502422 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP4.51□□□□□ -1.69
MATR3-202ENST00000502422 MARK1Q9P0L2 795 aa4.51□□□□□ -1.69
MATR3-202ENST00000502422 WHRNQ9P202 907 aa4.51□□□□□ -1.69
MATR3-202ENST00000502422 NCKAP1Q9Y2A7 1128 aa4.51□□□□□ -1.69
MATR3-202ENST00000502422 PIEZO2Q9H5I5 2752 aa4.51□□□□□ -1.69
MATR3-202ENST00000502422 ARHGAP10A1A4S6 786 aa4.51□□□□□ -1.69
MATR3-202ENST00000502422 CCDC160A6NGH7 325 aa4.51□□□□□ -1.69
MATR3-202ENST00000502422 FAM47E-STBD1D6RA91 191 aa4.51□□□□□ -1.69
MATR3-202ENST00000502422 GOLGA8TH3BQL2 631 aa4.51□□□□□ -1.69
MATR3-202ENST00000502422 K7EPI3 171 aa4.51□□□□□ -1.69
MATR3-202ENST00000502422 YKT6O15498 198 aa4.51□□□□□ -1.69
MATR3-202ENST00000502422 PAPSS1O43252 624 aaPredicted RBP4.51□□□□□ -1.69
MATR3-202ENST00000502422 PEX1O43933 1283 aa4.51□□□□□ -1.69
MATR3-202ENST00000502422 FKBP6O75344 327 aa4.51□□□□□ -1.69
MATR3-202ENST00000502422 MTA2O94776 668 aa4.51□□□□□ -1.69
MATR3-202ENST00000502422 GCNT3O95395 438 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms