RNA–Protein interactions for RNA: ENST00000501400.1

LINC00535-201, long intergenic non-protein coding RNA 535, humanhuman

TSL 1 (best) BASIC

Gene LINC00535, Length 1,914 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00535-201ENST00000501400 SMARCD2Q92925 531 aa18.1■□□□□ 0.49
LINC00535-201ENST00000501400 TBRG4Q969Z0 631 aaKnown RBP eCLIP18.1■□□□□ 0.49
LINC00535-201ENST00000501400 BRD9Q9H8M2 597 aa18.1■□□□□ 0.49
LINC00535-201ENST00000501400 B4GALT6Q9UBX8 382 aa18.1■□□□□ 0.49
LINC00535-201ENST00000501400 TRMT6Q9UJA5 497 aaKnown RBP18.1■□□□□ 0.49
LINC00535-201ENST00000501400 PIKFYVEQ9Y2I7 2098 aa18.1■□□□□ 0.49
LINC00535-201ENST00000501400 TCF20Q9UGU0 1960 aaKnown RBP18.1■□□□□ 0.49
LINC00535-201ENST00000501400 AGAP14A8MT82 685 aa18.1■□□□□ 0.49
LINC00535-201ENST00000501400 HNRNPCL1O60812 293 aaKnown RBP18.1■□□□□ 0.49
LINC00535-201ENST00000501400 KERAO60938 352 aa18.1■□□□□ 0.49
LINC00535-201ENST00000501400 CTSLP07711 333 aa18.1■□□□□ 0.49
LINC00535-201ENST00000501400 C1SP09871 688 aa18.1■□□□□ 0.49
LINC00535-201ENST00000501400 UGT1A6P19224 532 aa18.1■□□□□ 0.49
LINC00535-201ENST00000501400 ITGALP20701 1170 aa18.1■□□□□ 0.49
LINC00535-201ENST00000501400 IMPDH1P20839 514 aa18.1■□□□□ 0.49
LINC00535-201ENST00000501400 UGT1A1P22309 533 aa18.1■□□□□ 0.49
LINC00535-201ENST00000501400 UGT1A4P22310 534 aa18.1■□□□□ 0.49
LINC00535-201ENST00000501400 ACRV1P26436 265 aa18.1■□□□□ 0.49
LINC00535-201ENST00000501400 PTPN4P29074 926 aa18.1■□□□□ 0.49
LINC00535-201ENST00000501400 UGT1A3P35503 534 aa18.1■□□□□ 0.49
LINC00535-201ENST00000501400 UGT1A5P35504 534 aa18.1■□□□□ 0.49
LINC00535-201ENST00000501400 TSNQ15631 228 aaKnown RBP18.1■□□□□ 0.49
LINC00535-201ENST00000501400 ZNF678Q5SXM1 525 aa18.1■□□□□ 0.49
LINC00535-201ENST00000501400 SEL1L3Q68CR1 1132 aa18.1■□□□□ 0.49
LINC00535-201ENST00000501400 GRAMD4Q6IC98 578 aa18.1■□□□□ 0.49
LINC00535-201ENST00000501400 RFLNAQ6ZTI6 216 aa18.1■□□□□ 0.49
LINC00535-201ENST00000501400 LKAAEAR1Q8TD35 194 aa18.1■□□□□ 0.49
LINC00535-201ENST00000501400 OSBPL1AQ9BXW6 950 aa18.1■□□□□ 0.49
LINC00535-201ENST00000501400 CIPCQ9C0C6 399 aa18.1■□□□□ 0.49
LINC00535-201ENST00000501400 EBF3Q9H4W6 596 aa18.1■□□□□ 0.49
LINC00535-201ENST00000501400 EPB41L3Q9Y2J2 1087 aaPredicted RBP18.1■□□□□ 0.49
LINC00535-201ENST00000501400 SLC27A6Q9Y2P4 619 aa18.1■□□□□ 0.49
LINC00535-201ENST00000501400 PRSS21Q9Y6M0 314 aa18.1■□□□□ 0.49
LINC00535-201ENST00000501400 NPEPPSL1A6NEC2 478 aa18.09■□□□□ 0.49
LINC00535-201ENST00000501400 RFXAPO00287 272 aa18.09■□□□□ 0.49
LINC00535-201ENST00000501400 CDC7O00311 574 aa18.09■□□□□ 0.49
LINC00535-201ENST00000501400 RPS3P23396 243 aaKnown RBP eCLIP18.09■□□□□ 0.49
LINC00535-201ENST00000501400 VASPP50552 380 aaPredicted RBP18.09■□□□□ 0.49
LINC00535-201ENST00000501400 ATP6V0D1P61421 351 aa18.09■□□□□ 0.49
LINC00535-201ENST00000501400 CPNE9Q8IYJ1 553 aa18.09■□□□□ 0.49
LINC00535-201ENST00000501400 NKAPQ8N5F7 415 aaKnown RBP18.09■□□□□ 0.49
LINC00535-201ENST00000501400 PTGR2Q8N8N7 351 aaPredicted RBP18.09■□□□□ 0.49
LINC00535-201ENST00000501400 HEPHQ9BQS7 1158 aa18.09■□□□□ 0.49
LINC00535-201ENST00000501400 TBC1D10AQ9BXI6 508 aa18.09■□□□□ 0.49
LINC00535-201ENST00000501400 NUF2Q9BZD4 464 aa18.09■□□□□ 0.49
LINC00535-201ENST00000501400 WDR55Q9H6Y2 383 aaPredicted RBP18.09■□□□□ 0.49
LINC00535-201ENST00000501400 PCDHB1Q9Y5F3 818 aa18.09■□□□□ 0.49
LINC00535-201ENST00000501400 PLXNA2O75051 1894 aa18.09■□□□□ 0.49
LINC00535-201ENST00000501400 TSPAN11A1L157 253 aa18.08■□□□□ 0.49
LINC00535-201ENST00000501400 HEPACAM2A8MVW5 462 aa18.08■□□□□ 0.49
LINC00535-201ENST00000501400 UBFD1O14562 309 aaKnown RBP18.08■□□□□ 0.49
LINC00535-201ENST00000501400 SMIM24O75264 130 aa18.08■□□□□ 0.49
LINC00535-201ENST00000501400 LEFTY1O75610 366 aa18.08■□□□□ 0.49
LINC00535-201ENST00000501400 SNUPNO95149 360 aaKnown RBP18.08■□□□□ 0.49
LINC00535-201ENST00000501400 ENO1P06733 434 aaKnown RBP18.08■□□□□ 0.49
LINC00535-201ENST00000501400 AOC1P19801 751 aa18.08■□□□□ 0.49
LINC00535-201ENST00000501400 RASSF2P50749 326 aa18.08■□□□□ 0.49
LINC00535-201ENST00000501400 HERVK_113P63132 956 aa18.08■□□□□ 0.49
LINC00535-201ENST00000501400 UNC50Q53HI1 259 aa18.08■□□□□ 0.49
LINC00535-201ENST00000501400 SH2D4BQ5SQS7 431 aa18.08■□□□□ 0.49
LINC00535-201ENST00000501400 FAM219BQ5XKK7 198 aa18.08■□□□□ 0.49
LINC00535-201ENST00000501400 RINLQ6ZS11 566 aa18.08■□□□□ 0.49
LINC00535-201ENST00000501400 RBFAQ8N0V3 343 aa18.08■□□□□ 0.49
LINC00535-201ENST00000501400 ZNF366Q8N895 744 aa18.08■□□□□ 0.49
LINC00535-201ENST00000501400 WFIKKN2Q8TEU8 576 aa18.08■□□□□ 0.49
LINC00535-201ENST00000501400 STON2Q8WXE9 905 aa18.08■□□□□ 0.49
LINC00535-201ENST00000501400 NXPE3Q969Y0 559 aa18.08■□□□□ 0.49
LINC00535-201ENST00000501400 FUBP1Q96AE4 644 aaKnown RBP18.08■□□□□ 0.49
LINC00535-201ENST00000501400 LINGO1Q96FE5 620 aa18.08■□□□□ 0.49
LINC00535-201ENST00000501400 TUBB6Q9BUF5 446 aa18.08■□□□□ 0.49
LINC00535-201ENST00000501400 ERVK-6Q9BXR3 956 aa18.08■□□□□ 0.49
LINC00535-201ENST00000501400 DZANK1Q9NVP4 752 aa18.08■□□□□ 0.49
LINC00535-201ENST00000501400 SORCS3Q9UPU3 1222 aa18.08■□□□□ 0.49
LINC00535-201ENST00000501400 MYO9BQ13459 2157 aa18.08■□□□□ 0.49
LINC00535-201ENST00000501400 A0A1W2PQ67 120 aa18.08■□□□□ 0.48
LINC00535-201ENST00000501400 LRRC14BA6NHZ5 514 aa18.08■□□□□ 0.48
LINC00535-201ENST00000501400 PRRT4C9JH25 899 aa18.08■□□□□ 0.48
LINC00535-201ENST00000501400 E5RI56 91 aa18.08■□□□□ 0.48
LINC00535-201ENST00000501400 E9PBE3 544 aa18.08■□□□□ 0.48
LINC00535-201ENST00000501400 MGRN1O60291 552 aa18.08■□□□□ 0.48
LINC00535-201ENST00000501400 KLHL41O60662 606 aa18.08■□□□□ 0.48
LINC00535-201ENST00000501400 SRPRAP08240 638 aaKnown RBP18.08■□□□□ 0.48
LINC00535-201ENST00000501400 TPBGLP0DKB5 382 aa18.08■□□□□ 0.48
LINC00535-201ENST00000501400 ZNF7P17097 686 aaPredicted RBP18.08■□□□□ 0.48
LINC00535-201ENST00000501400 CHRM3P20309 590 aa18.08■□□□□ 0.48
LINC00535-201ENST00000501400 RECQLP46063 649 aaPredicted RBP18.08■□□□□ 0.48
LINC00535-201ENST00000501400 GALNT1Q10472 559 aaPredicted RBP18.08■□□□□ 0.48
LINC00535-201ENST00000501400 TBCCQ15814 346 aa18.08■□□□□ 0.48
LINC00535-201ENST00000501400 BRAT1Q6PJG6 821 aa18.08■□□□□ 0.48
LINC00535-201ENST00000501400 GPR149Q86SP6 731 aa18.08■□□□□ 0.48
LINC00535-201ENST00000501400 NXPE1Q8N323 547 aa18.08■□□□□ 0.48
LINC00535-201ENST00000501400 EEF1AKMT1Q8WVE0 214 aa18.08■□□□□ 0.48
LINC00535-201ENST00000501400 PPP1R36Q96LQ0 422 aa18.08■□□□□ 0.48
LINC00535-201ENST00000501400 CDCA3Q99618 268 aaPredicted RBP18.08■□□□□ 0.48
LINC00535-201ENST00000501400 FAM83CQ9BQN1 747 aa18.08■□□□□ 0.48
LINC00535-201ENST00000501400 IGFLR1Q9H665 355 aa18.08■□□□□ 0.48
LINC00535-201ENST00000501400 TCF7L2Q9NQB0 619 aa18.08■□□□□ 0.48
LINC00535-201ENST00000501400 GTSE1Q9NYZ3 720 aa18.08■□□□□ 0.48
LINC00535-201ENST00000501400 VTI1BQ9UEU0 232 aa18.08■□□□□ 0.48
LINC00535-201ENST00000501400 GOLGA8QA0A0J9YX86 632 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms