RNA–Protein interactions for RNA: ENST00000498043.6

CHRNA4-206, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 5

Gene CHRNA4, Length 2,052 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-206ENST00000498043 CD200R1Q8TD46 325 aa17.66■□□□□ 0.42
CHRNA4-206ENST00000498043 MSLNLQ96KJ4 702 aa17.66■□□□□ 0.42
CHRNA4-206ENST00000498043 TTC1Q99614 292 aa17.66■□□□□ 0.42
CHRNA4-206ENST00000498043 TMEM245Q9H330 911 aa17.66■□□□□ 0.42
CHRNA4-206ENST00000498043 KDM4CQ9H3R0 1056 aa17.66■□□□□ 0.42
CHRNA4-206ENST00000498043 SYTL2Q9HCH5 934 aa17.66■□□□□ 0.42
CHRNA4-206ENST00000498043 PNPOQ9NVS9 261 aa17.66■□□□□ 0.42
CHRNA4-206ENST00000498043 LMCD1Q9NZU5 365 aa17.66■□□□□ 0.42
CHRNA4-206ENST00000498043 DKK3Q9UBP4 350 aa17.66■□□□□ 0.42
CHRNA4-206ENST00000498043 ITM2BQ9Y287 266 aa17.66■□□□□ 0.42
CHRNA4-206ENST00000498043 NUMBLQ9Y6R0 609 aa17.66■□□□□ 0.42
CHRNA4-206ENST00000498043 A8MT66 165 aa17.65■□□□□ 0.42
CHRNA4-206ENST00000498043 PLXNA2O75051 1894 aa17.65■□□□□ 0.42
CHRNA4-206ENST00000498043 ECI2O75521 394 aa17.65■□□□□ 0.42
CHRNA4-206ENST00000498043 PRNPP04156 253 aa17.65■□□□□ 0.42
CHRNA4-206ENST00000498043 CHRNGP07510 517 aa17.65■□□□□ 0.42
CHRNA4-206ENST00000498043 ZNF30P17039 623 aa17.65■□□□□ 0.42
CHRNA4-206ENST00000498043 ZNF7P17097 686 aaPredicted RBP17.65■□□□□ 0.42
CHRNA4-206ENST00000498043 PPARGP37231 505 aaPredicted RBP17.65■□□□□ 0.42
CHRNA4-206ENST00000498043 IL12RB1P42701 662 aa17.65■□□□□ 0.42
CHRNA4-206ENST00000498043 AQP5P55064 265 aa17.65■□□□□ 0.42
CHRNA4-206ENST00000498043 GRIN2CQ14957 1233 aa17.65■□□□□ 0.42
CHRNA4-206ENST00000498043 ITPRIPL2Q3MIP1 535 aa17.65■□□□□ 0.42
CHRNA4-206ENST00000498043 ATP13A5Q4VNC0 1218 aa17.65■□□□□ 0.42
CHRNA4-206ENST00000498043 CLDN19Q8N6F1 224 aa17.65■□□□□ 0.42
CHRNA4-206ENST00000498043 CCNYL1Q8N7R7 359 aa17.65■□□□□ 0.42
CHRNA4-206ENST00000498043 UCMAQ8WVF2 138 aa17.65■□□□□ 0.42
CHRNA4-206ENST00000498043 OR8D1Q8WZ84 308 aa17.65■□□□□ 0.42
CHRNA4-206ENST00000498043 ERP27Q96DN0 273 aa17.65■□□□□ 0.42
CHRNA4-206ENST00000498043 PLEKHG4BQ96PX9 1271 aa17.65■□□□□ 0.42
CHRNA4-206ENST00000498043 TTYH1Q9H313 450 aaPredicted RBP17.65■□□□□ 0.42
CHRNA4-206ENST00000498043 PKD2L2Q9NZM6 624 aa17.65■□□□□ 0.42
CHRNA4-206ENST00000498043 PCDHB1Q9Y5F3 818 aa17.65■□□□□ 0.42
CHRNA4-206ENST00000498043 ARNTLO00327 626 aa17.65■□□□□ 0.42
CHRNA4-206ENST00000498043 DCTN3O75935 186 aa17.65■□□□□ 0.42
CHRNA4-206ENST00000498043 KCNC1P48547 511 aa17.65■□□□□ 0.42
CHRNA4-206ENST00000498043 RALGDSQ12967 914 aa17.65■□□□□ 0.42
CHRNA4-206ENST00000498043 ADGRE1Q14246 886 aa17.65■□□□□ 0.42
CHRNA4-206ENST00000498043 ELAVL3Q14576 367 aaKnown RBP17.65■□□□□ 0.42
CHRNA4-206ENST00000498043 OR4D1Q15615 310 aa17.65■□□□□ 0.42
CHRNA4-206ENST00000498043 GPR33Q49SQ1 333 aa17.65■□□□□ 0.42
CHRNA4-206ENST00000498043 EGFLAMQ63HQ2 1017 aa17.65■□□□□ 0.42
CHRNA4-206ENST00000498043 PTRHD1Q6GMV3 140 aaKnown RBP17.65■□□□□ 0.42
CHRNA4-206ENST00000498043 ZNF781Q8N8C0 355 aa17.65■□□□□ 0.42
CHRNA4-206ENST00000498043 KDM1BQ8NB78 822 aa17.65■□□□□ 0.42
CHRNA4-206ENST00000498043 LRRC37BQ96QE4 947 aa17.65■□□□□ 0.42
CHRNA4-206ENST00000498043 ACOX2Q99424 681 aa17.65■□□□□ 0.42
CHRNA4-206ENST00000498043 MYLK2Q9H1R3 596 aa17.65■□□□□ 0.42
CHRNA4-206ENST00000498043 CACNA2D2Q9NY47 1150 aa17.65■□□□□ 0.42
CHRNA4-206ENST00000498043 GNPTGQ9UJJ9 305 aa17.65■□□□□ 0.42
CHRNA4-206ENST00000498043 COMMD10Q9Y6G5 202 aa17.65■□□□□ 0.42
CHRNA4-206ENST00000498043 PRSS21Q9Y6M0 314 aa17.65■□□□□ 0.42
CHRNA4-206ENST00000498043 ITGB6P18564 788 aa17.64■□□□□ 0.41
CHRNA4-206ENST00000498043 IGFBP4P22692 258 aa17.64■□□□□ 0.41
CHRNA4-206ENST00000498043 MMP12P39900 470 aa17.64■□□□□ 0.41
CHRNA4-206ENST00000498043 ETV3P41162 512 aa17.64■□□□□ 0.41
CHRNA4-206ENST00000498043 PRKAA2P54646 552 aa17.64■□□□□ 0.41
CHRNA4-206ENST00000498043 RCN2Q14257 317 aa17.64■□□□□ 0.41
CHRNA4-206ENST00000498043 SETDB1Q15047 1291 aa17.64■□□□□ 0.41
CHRNA4-206ENST00000498043 LYPLAL1Q5VWZ2 237 aa17.64■□□□□ 0.41
CHRNA4-206ENST00000498043 DPPA4Q7L190 304 aa17.64■□□□□ 0.41
CHRNA4-206ENST00000498043 CPNE9Q8IYJ1 553 aa17.64■□□□□ 0.41
CHRNA4-206ENST00000498043 SMRP1Q8NCR6 262 aa17.64■□□□□ 0.41
CHRNA4-206ENST00000498043 PIP4K2CQ8TBX8 421 aa17.64■□□□□ 0.41
CHRNA4-206ENST00000498043 LKAAEAR1Q8TD35 194 aa17.64■□□□□ 0.41
CHRNA4-206ENST00000498043 SUSD6Q92537 303 aa17.64■□□□□ 0.41
CHRNA4-206ENST00000498043 PHF21BQ96EK2 531 aa17.64■□□□□ 0.41
CHRNA4-206ENST00000498043 TMEM237Q96Q45 408 aa17.64■□□□□ 0.41
CHRNA4-206ENST00000498043 DERL2Q9GZP9 239 aa17.64■□□□□ 0.41
CHRNA4-206ENST00000498043 PRO3102Q9H379 93 aa17.64■□□□□ 0.41
CHRNA4-206ENST00000498043 KCNK4Q9NYG8 393 aa17.64■□□□□ 0.41
CHRNA4-206ENST00000498043 TSR3Q9UJK0 312 aaKnown RBP17.64■□□□□ 0.41
CHRNA4-206ENST00000498043 IKZF3Q9UKT9 509 aa17.64■□□□□ 0.41
CHRNA4-206ENST00000498043 HCN2Q9UL51 889 aa17.64■□□□□ 0.41
CHRNA4-206ENST00000498043 EPHX1P07099 455 aa17.63■□□□□ 0.41
CHRNA4-206ENST00000498043 MPSTP25325 297 aa17.63■□□□□ 0.41
CHRNA4-206ENST00000498043 NFKBIAP25963 317 aa17.63■□□□□ 0.41
CHRNA4-206ENST00000498043 EIF2DP41214 584 aaKnown RBP17.63■□□□□ 0.41
CHRNA4-206ENST00000498043 CLCN7P51798 805 aa17.63■□□□□ 0.41
CHRNA4-206ENST00000498043 PTPN5P54829 565 aa17.63■□□□□ 0.41
CHRNA4-206ENST00000498043 ZDHHC20Q5W0Z9 365 aa17.63■□□□□ 0.41
CHRNA4-206ENST00000498043 TRIM67Q6ZTA4 783 aa17.63■□□□□ 0.41
CHRNA4-206ENST00000498043 MTSS1LQ765P7 747 aa17.63■□□□□ 0.41
CHRNA4-206ENST00000498043 WDR75Q8IWA0 830 aaKnown RBP17.63■□□□□ 0.41
CHRNA4-206ENST00000498043 SCAMP4Q969E2 229 aa17.63■□□□□ 0.41
CHRNA4-206ENST00000498043 LINGO1Q96FE5 620 aa17.63■□□□□ 0.41
CHRNA4-206ENST00000498043 SPATA16Q9BXB7 569 aa17.63■□□□□ 0.41
CHRNA4-206ENST00000498043 SHCBP1LQ9BZQ2 653 aa17.63■□□□□ 0.41
CHRNA4-206ENST00000498043 DRC3Q9H069 523 aa17.63■□□□□ 0.41
CHRNA4-206ENST00000498043 HEY2Q9UBP5 337 aa17.63■□□□□ 0.41
CHRNA4-206ENST00000498043 NPEPPSL1A6NEC2 478 aa17.63■□□□□ 0.41
CHRNA4-206ENST00000498043 AGAP14A8MT82 685 aa17.63■□□□□ 0.41
CHRNA4-206ENST00000498043 PLK4O00444 970 aa17.63■□□□□ 0.41
CHRNA4-206ENST00000498043 IPO13O94829 963 aaKnown RBP17.63■□□□□ 0.41
CHRNA4-206ENST00000498043 RPS3P23396 243 aaKnown RBP eCLIP17.63■□□□□ 0.41
CHRNA4-206ENST00000498043 SERPINB3P29508 390 aa17.63■□□□□ 0.41
CHRNA4-206ENST00000498043 GRIA2P42262 883 aa17.63■□□□□ 0.41
CHRNA4-206ENST00000498043 ASPHQ12797 758 aa17.63■□□□□ 0.41
CHRNA4-206ENST00000498043 HSF5Q4G112 596 aaPredicted RBP17.63■□□□□ 0.41
CHRNA4-206ENST00000498043 ARL13AQ5H913 290 aaPredicted RBP17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms