RNA–Protein interactions for RNA: ENST00000497892.5

ERCC8-208, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 1 (best)

Gene ERCC8, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-208ENST00000497892 TAF1AQ15573 450 aaPredicted RBP11.15□□□□□ -0.62
ERCC8-208ENST00000497892 CYP1B1Q16678 543 aa11.15□□□□□ -0.62
ERCC8-208ENST00000497892 DEFB133Q30KQ1 61 aa11.15□□□□□ -0.62
ERCC8-208ENST00000497892 DOK6Q6PKX4 331 aa11.15□□□□□ -0.62
ERCC8-208ENST00000497892 LVRNQ6Q4G3 990 aa11.15□□□□□ -0.62
ERCC8-208ENST00000497892 LINC00523Q86TU6 105 aa11.15□□□□□ -0.62
ERCC8-208ENST00000497892 SLCO6A1Q86UG4 719 aa11.15□□□□□ -0.62
ERCC8-208ENST00000497892 BRSK1Q8TDC3 778 aa11.15□□□□□ -0.62
ERCC8-208ENST00000497892 ADAMTS14Q8WXS8 1223 aa11.15□□□□□ -0.62
ERCC8-208ENST00000497892 GLYATL1Q969I3 302 aa11.15□□□□□ -0.62
ERCC8-208ENST00000497892 APOLD1Q96LR9 279 aa11.15□□□□□ -0.62
ERCC8-208ENST00000497892 VPS35Q96QK1 796 aa11.15□□□□□ -0.62
ERCC8-208ENST00000497892 C19orf43Q9BQ61 176 aa11.15□□□□□ -0.62
ERCC8-208ENST00000497892 BOCQ9BWV1 1114 aa11.15□□□□□ -0.62
ERCC8-208ENST00000497892 SPATA16Q9BXB7 569 aa11.15□□□□□ -0.62
ERCC8-208ENST00000497892 TMEM168Q9H0V1 697 aa11.15□□□□□ -0.62
ERCC8-208ENST00000497892 ETNK1Q9HBU6 452 aa11.15□□□□□ -0.62
ERCC8-208ENST00000497892 BPIFA1Q9NP55 256 aa11.15□□□□□ -0.62
ERCC8-208ENST00000497892 IL26Q9NPH9 171 aa11.15□□□□□ -0.62
ERCC8-208ENST00000497892 RAB6BQ9NRW1 208 aa11.15□□□□□ -0.62
ERCC8-208ENST00000497892 TRNAU1APQ9NX07 287 aaKnown RBP11.15□□□□□ -0.62
ERCC8-208ENST00000497892 SMARCAL1Q9NZC9 954 aa11.15□□□□□ -0.62
ERCC8-208ENST00000497892 NCKIPSDQ9NZQ3 722 aa11.15□□□□□ -0.62
ERCC8-208ENST00000497892 SUFUQ9UMX1 484 aa11.15□□□□□ -0.62
ERCC8-208ENST00000497892 PKP3Q9Y446 797 aa11.15□□□□□ -0.62
ERCC8-208ENST00000497892 ARL5AQ9Y689 179 aa11.15□□□□□ -0.62
ERCC8-208ENST00000497892 OAS3Q9Y6K5 1087 aaKnown RBP11.15□□□□□ -0.62
ERCC8-208ENST00000497892 U3KQA8 63 aa11.15□□□□□ -0.62
ERCC8-208ENST00000497892 PTPRBP23467 1997 aa11.14□□□□□ -0.63
ERCC8-208ENST00000497892 CHD8Q9HCK8 2581 aa11.14□□□□□ -0.63
ERCC8-208ENST00000497892 GLYATL1P3A0A0U1RQE8 302 aa11.14□□□□□ -0.63
ERCC8-208ENST00000497892 C2orf81A6NN90 581 aa11.14□□□□□ -0.63
ERCC8-208ENST00000497892 E7EVH7 732 aa11.14□□□□□ -0.63
ERCC8-208ENST00000497892 GAPDHSO14556 408 aaPredicted RBP11.14□□□□□ -0.63
ERCC8-208ENST00000497892 ZNF185O15231 689 aa11.14□□□□□ -0.63
ERCC8-208ENST00000497892 YY2O15391 372 aa11.14□□□□□ -0.63
ERCC8-208ENST00000497892 LDB2O43679 373 aa11.14□□□□□ -0.63
ERCC8-208ENST00000497892 BUD23O43709 281 aaKnown RBP11.14□□□□□ -0.63
ERCC8-208ENST00000497892 TRIM16O95361 564 aa11.14□□□□□ -0.63
ERCC8-208ENST00000497892 CRTAMO95727 393 aa11.14□□□□□ -0.63
ERCC8-208ENST00000497892 ANXA6P08133 673 aa11.14□□□□□ -0.63
ERCC8-208ENST00000497892 ZSCAN5DPP0CG00 497 aa11.14□□□□□ -0.63
ERCC8-208ENST00000497892 CKMT1AP12532 417 aa11.14□□□□□ -0.63
ERCC8-208ENST00000497892 LPOP22079 712 aaPredicted RBP11.14□□□□□ -0.63
ERCC8-208ENST00000497892 ACP1P24666 158 aa11.14□□□□□ -0.63
ERCC8-208ENST00000497892 RPL22P35268 128 aaKnown RBP11.14□□□□□ -0.63
ERCC8-208ENST00000497892 GNPDA1P46926 289 aa11.14□□□□□ -0.63
ERCC8-208ENST00000497892 KCNJ1P48048 391 aa11.14□□□□□ -0.63
ERCC8-208ENST00000497892 ZNF140P52738 457 aaPredicted RBP11.14□□□□□ -0.63
ERCC8-208ENST00000497892 PDE1BQ01064 536 aa11.14□□□□□ -0.63
ERCC8-208ENST00000497892 TCEA2Q15560 299 aa11.14□□□□□ -0.63
ERCC8-208ENST00000497892 PAPD7Q5XG87 772 aaKnown RBP11.14□□□□□ -0.63
ERCC8-208ENST00000497892 TTC27Q6P3X3 843 aa11.14□□□□□ -0.63
ERCC8-208ENST00000497892 C4orf22Q6V702 233 aa11.14□□□□□ -0.63
ERCC8-208ENST00000497892 GSTA5Q7RTV2 222 aa11.14□□□□□ -0.63
ERCC8-208ENST00000497892 RAB44Q7Z6P3 723 aaPredicted RBP11.14□□□□□ -0.63
ERCC8-208ENST00000497892 GKN2Q86XP6 184 aa11.14□□□□□ -0.63
ERCC8-208ENST00000497892 PHYKPLQ8IUZ5 450 aa11.14□□□□□ -0.63
ERCC8-208ENST00000497892 OR2M4Q96R27 311 aa11.14□□□□□ -0.63
ERCC8-208ENST00000497892 NAPGQ99747 312 aaPredicted RBP11.14□□□□□ -0.63
ERCC8-208ENST00000497892 AP1M1Q9BXS5 423 aa11.14□□□□□ -0.63
ERCC8-208ENST00000497892 EIF2B3Q9NR50 452 aaKnown RBP11.14□□□□□ -0.63
ERCC8-208ENST00000497892 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.14□□□□□ -0.63
ERCC8-208ENST00000497892 MOSPD1Q9UJG1 213 aa11.14□□□□□ -0.63
ERCC8-208ENST00000497892 WASF3Q9UPY6 502 aa11.14□□□□□ -0.63
ERCC8-208ENST00000497892 TMEM98Q9Y2Y6 226 aa11.14□□□□□ -0.63
ERCC8-208ENST00000497892 PCDHGA1Q9Y5H4 931 aa11.14□□□□□ -0.63
ERCC8-208ENST00000497892 ARHGEF17Q96PE2 2063 aaPredicted RBP11.13□□□□□ -0.63
ERCC8-208ENST00000497892 GOLGA6L10A0A0M3HER8 536 aa11.13□□□□□ -0.63
ERCC8-208ENST00000497892 GPR89AB7ZAQ6 455 aa11.13□□□□□ -0.63
ERCC8-208ENST00000497892 FANCGO15287 622 aa11.13□□□□□ -0.63
ERCC8-208ENST00000497892 STX7O15400 261 aaKnown RBP11.13□□□□□ -0.63
ERCC8-208ENST00000497892 DNAJC6O75061 913 aa11.13□□□□□ -0.63
ERCC8-208ENST00000497892 PHF2O75151 1096 aa11.13□□□□□ -0.63
ERCC8-208ENST00000497892 RFPL3O75679 317 aa11.13□□□□□ -0.63
ERCC8-208ENST00000497892 SLC25A14O95258 325 aaPredicted RBP11.13□□□□□ -0.63
ERCC8-208ENST00000497892 ASMTLO95671 621 aa11.13□□□□□ -0.63
ERCC8-208ENST00000497892 APRTP07741 180 aa11.13□□□□□ -0.63
ERCC8-208ENST00000497892 GPR89BP0CG08 455 aa11.13□□□□□ -0.63
ERCC8-208ENST00000497892 SNRPBP14678 240 aaKnown RBP11.13□□□□□ -0.63
ERCC8-208ENST00000497892 ADCY8P40145 1251 aa11.13□□□□□ -0.63
ERCC8-208ENST00000497892 SHC2P98077 582 aa11.13□□□□□ -0.63
ERCC8-208ENST00000497892 DAB2P98082 770 aa11.13□□□□□ -0.63
ERCC8-208ENST00000497892 CDH17Q12864 832 aa11.13□□□□□ -0.63
ERCC8-208ENST00000497892 ILF3Q12906 894 aaKnown RBP eCLIP11.13□□□□□ -0.63
ERCC8-208ENST00000497892 ILKQ13418 452 aa11.13□□□□□ -0.63
ERCC8-208ENST00000497892 LRP8Q14114 963 aa11.13□□□□□ -0.63
ERCC8-208ENST00000497892 PTPRCAPQ14761 206 aa11.13□□□□□ -0.63
ERCC8-208ENST00000497892 ATP13A5Q4VNC0 1218 aa11.13□□□□□ -0.63
ERCC8-208ENST00000497892 PYCR3Q53H96 274 aa11.13□□□□□ -0.63
ERCC8-208ENST00000497892 FAM151BQ6UXP7 276 aa11.13□□□□□ -0.63
ERCC8-208ENST00000497892 MARK2Q7KZI7 788 aaKnown RBP11.13□□□□□ -0.63
ERCC8-208ENST00000497892 GALNT13Q8IUC8 556 aa11.13□□□□□ -0.63
ERCC8-208ENST00000497892 SLC35F3Q8IY50 421 aa11.13□□□□□ -0.63
ERCC8-208ENST00000497892 ARL10Q8N8L6 244 aa11.13□□□□□ -0.63
ERCC8-208ENST00000497892 PNPLA1Q8N8W4 532 aa11.13□□□□□ -0.63
ERCC8-208ENST00000497892 OR4K2Q8NGD2 314 aa11.13□□□□□ -0.63
ERCC8-208ENST00000497892 OR52K1Q8NGK4 314 aa11.13□□□□□ -0.63
ERCC8-208ENST00000497892 GPBAR1Q8TDU6 330 aa11.13□□□□□ -0.63
ERCC8-208ENST00000497892 SCG3Q8WXD2 468 aaKnown RBP11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms