RNA–Protein interactions for RNA: ENST00000497203.1

SMC4-225, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-225ENST00000497203 DNAJB4Q9UDY4 337 aa4.02□□□□□ -1.77
SMC4-225ENST00000497203 DBNLQ9UJU6 430 aaKnown RBP4.02□□□□□ -1.77
SMC4-225ENST00000497203 AGO1Q9UL18 857 aaKnown RBP4.02□□□□□ -1.77
SMC4-225ENST00000497203 SEC23IPQ9Y6Y8 1000 aaKnown RBP4.02□□□□□ -1.77
SMC4-225ENST00000497203 ARHGEF40Q8TER5 1519 aa4.01□□□□□ -1.77
SMC4-225ENST00000497203 hCG_1809904A0A1W2PP81 198 aa4.01□□□□□ -1.77
SMC4-225ENST00000497203 A0A1W2PPE2 198 aa4.01□□□□□ -1.77
SMC4-225ENST00000497203 A0A1W2PR64 198 aa4.01□□□□□ -1.77
SMC4-225ENST00000497203 LNP1A1A4G5 178 aa4.01□□□□□ -1.77
SMC4-225ENST00000497203 CPED1A4D0V7 1026 aa4.01□□□□□ -1.77
SMC4-225ENST00000497203 A6NL46 340 aa4.01□□□□□ -1.77
SMC4-225ENST00000497203 EIF4E1BA6NMX2 242 aaKnown RBP4.01□□□□□ -1.77
SMC4-225ENST00000497203 INAFM1C9JVW0 142 aa4.01□□□□□ -1.77
SMC4-225ENST00000497203 HS3ST1O14792 307 aa4.01□□□□□ -1.77
SMC4-225ENST00000497203 GH2P01242 217 aa4.01□□□□□ -1.77
SMC4-225ENST00000497203 APOA4P06727 396 aa4.01□□□□□ -1.77
SMC4-225ENST00000497203 ABCB1P08183 1280 aaPredicted RBP4.01□□□□□ -1.77
SMC4-225ENST00000497203 EEF1DP29692 281 aaKnown RBP4.01□□□□□ -1.77
SMC4-225ENST00000497203 BDKRB2P30411 391 aa4.01□□□□□ -1.77
SMC4-225ENST00000497203 CCKARP32238 428 aa4.01□□□□□ -1.77
SMC4-225ENST00000497203 CAPZA2P47755 286 aa4.01□□□□□ -1.77
SMC4-225ENST00000497203 HNRNPH2P55795 449 aaKnown RBP4.01□□□□□ -1.77
SMC4-225ENST00000497203 SEC61BP60468 96 aaKnown RBP4.01□□□□□ -1.77
SMC4-225ENST00000497203 CXCL9Q07325 125 aa4.01□□□□□ -1.77
SMC4-225ENST00000497203 AIMP1Q12904 312 aaKnown RBP4.01□□□□□ -1.77
SMC4-225ENST00000497203 EFNB3Q15768 340 aa4.01□□□□□ -1.77
SMC4-225ENST00000497203 MYLK3Q32MK0 819 aa4.01□□□□□ -1.77
SMC4-225ENST00000497203 AMZ1Q400G9 498 aa4.01□□□□□ -1.77
SMC4-225ENST00000497203 TDRD12Q587J7 1177 aaKnown RBP4.01□□□□□ -1.77
SMC4-225ENST00000497203 RPUSD3Q6P087 351 aaKnown RBP4.01□□□□□ -1.77
SMC4-225ENST00000497203 C8orf82Q6P1X6 216 aaPredicted RBP4.01□□□□□ -1.77
SMC4-225ENST00000497203 PDXDC1Q6P996 788 aa4.01□□□□□ -1.77
SMC4-225ENST00000497203 SLC36A4Q6YBV0 504 aa4.01□□□□□ -1.77
SMC4-225ENST00000497203 CLEC17AQ6ZS10 378 aa4.01□□□□□ -1.77
SMC4-225ENST00000497203 CCDC190Q86UF4 302 aa4.01□□□□□ -1.77
SMC4-225ENST00000497203 KCTD6Q8NC69 237 aa4.01□□□□□ -1.77
SMC4-225ENST00000497203 HM13Q8TCT9 377 aa4.01□□□□□ -1.77
SMC4-225ENST00000497203 WFIKKN2Q8TEU8 576 aa4.01□□□□□ -1.77
SMC4-225ENST00000497203 ADAMTS14Q8WXS8 1223 aa4.01□□□□□ -1.77
SMC4-225ENST00000497203 DNAAF4Q8WXU2 420 aa4.01□□□□□ -1.77
SMC4-225ENST00000497203 APBB2Q92870 758 aa4.01□□□□□ -1.77
SMC4-225ENST00000497203 ZNF622Q969S3 477 aaKnown RBP eCLIP4.01□□□□□ -1.77
SMC4-225ENST00000497203 ORAI1Q96D31 301 aa4.01□□□□□ -1.77
SMC4-225ENST00000497203 LYZL4Q96KX0 146 aa4.01□□□□□ -1.77
SMC4-225ENST00000497203 MARK4Q96L34 752 aa4.01□□□□□ -1.77
SMC4-225ENST00000497203 SLC25A33Q9BSK2 321 aa4.01□□□□□ -1.77
SMC4-225ENST00000497203 AP1M1Q9BXS5 423 aa4.01□□□□□ -1.77
SMC4-225ENST00000497203 RTN4RQ9BZR6 473 aa4.01□□□□□ -1.77
SMC4-225ENST00000497203 KLHL4Q9C0H6 718 aa4.01□□□□□ -1.77
SMC4-225ENST00000497203 KCNN2Q9H2S1 579 aa4.01□□□□□ -1.77
SMC4-225ENST00000497203 DENND2DQ9H6A0 471 aaPredicted RBP4.01□□□□□ -1.77
SMC4-225ENST00000497203 PAG1Q9NWQ8 432 aa4.01□□□□□ -1.77
SMC4-225ENST00000497203 PADI1Q9ULC6 663 aa4.01□□□□□ -1.77
SMC4-225ENST00000497203 PLAGL1Q9UM63 463 aa4.01□□□□□ -1.77
SMC4-225ENST00000497203 ZNF711Q9Y462 761 aa4.01□□□□□ -1.77
SMC4-225ENST00000497203 PTGDR2Q9Y5Y4 395 aa4.01□□□□□ -1.77
SMC4-225ENST00000497203 IGKV2D-30A0A075B6S6 120 aa4□□□□□ -1.77
SMC4-225ENST00000497203 A0A1B0GVT2 93 aa4□□□□□ -1.77
SMC4-225ENST00000497203 A0A1W2PR77 199 aa4□□□□□ -1.77
SMC4-225ENST00000497203 ADAMDEC1O15204 470 aa4□□□□□ -1.77
SMC4-225ENST00000497203 NDUFS7O75251 213 aa4□□□□□ -1.77
SMC4-225ENST00000497203 HOXC6P09630 235 aa4□□□□□ -1.77
SMC4-225ENST00000497203 TRIM21P19474 475 aaKnown RBP4□□□□□ -1.77
SMC4-225ENST00000497203 TKTP29401 623 aaKnown RBP4□□□□□ -1.77
SMC4-225ENST00000497203 MATR3P43243 847 aaKnown RBP eCLIP4□□□□□ -1.77
SMC4-225ENST00000497203 MMP14P50281 582 aa4□□□□□ -1.77
SMC4-225ENST00000497203 CDC16Q13042 620 aa4□□□□□ -1.77
SMC4-225ENST00000497203 GRAPQ13588 217 aa4□□□□□ -1.77
SMC4-225ENST00000497203 KRT33BQ14525 404 aa4□□□□□ -1.77
SMC4-225ENST00000497203 DECR1Q16698 335 aa4□□□□□ -1.77
SMC4-225ENST00000497203 CCDC96Q2M329 555 aa4□□□□□ -1.77
SMC4-225ENST00000497203 TCP11X2Q5H9J9 407 aa4□□□□□ -1.77
SMC4-225ENST00000497203 C9orf152Q5JTZ5 239 aa4□□□□□ -1.77
SMC4-225ENST00000497203 TMEM198Q66K66 360 aa4□□□□□ -1.77
SMC4-225ENST00000497203 ADALQ6DHV7 355 aa4□□□□□ -1.77
SMC4-225ENST00000497203 DHRS7BQ6IAN0 325 aaPredicted RBP4□□□□□ -1.77
SMC4-225ENST00000497203 DUS1LQ6P1R4 473 aaKnown RBP4□□□□□ -1.77
SMC4-225ENST00000497203 FAM122CQ6P4D5 195 aa4□□□□□ -1.77
SMC4-225ENST00000497203 TPRG1Q6ZUI0 275 aa4□□□□□ -1.77
SMC4-225ENST00000497203 BEST3Q8N1M1 668 aa4□□□□□ -1.77
SMC4-225ENST00000497203 GUF1Q8N442 669 aaKnown RBP4□□□□□ -1.77
SMC4-225ENST00000497203 FAM216AQ8WUB2 273 aa4□□□□□ -1.77
SMC4-225ENST00000497203 TAAR8Q969N4 342 aa4□□□□□ -1.77
SMC4-225ENST00000497203 TMCO6Q96DC7 493 aa4□□□□□ -1.77
SMC4-225ENST00000497203 RADILQ96JH8 1075 aa4□□□□□ -1.77
SMC4-225ENST00000497203 ABHD1Q96SE0 405 aa4□□□□□ -1.77
SMC4-225ENST00000497203 KRTAP4-4Q9BYR3 166 aa4□□□□□ -1.77
SMC4-225ENST00000497203 SPATC1LQ9H0A9 340 aa4□□□□□ -1.77
SMC4-225ENST00000497203 MMP27Q9H306 513 aa4□□□□□ -1.77
SMC4-225ENST00000497203 DNAJC18Q9H819 358 aa4□□□□□ -1.77
SMC4-225ENST00000497203 ZNF148Q9UQR1 794 aa4□□□□□ -1.77
SMC4-225ENST00000497203 LOC102723996A0A087X1L8 192 aa3.99□□□□□ -1.77
SMC4-225ENST00000497203 GPR75-ASB3A0A0A6YYF3 556 aa3.99□□□□□ -1.77
SMC4-225ENST00000497203 A0A0U1RQJ8 604 aa3.99□□□□□ -1.77
SMC4-225ENST00000497203 TCRBV21S2A2A0A5A6 115 aa3.99□□□□□ -1.77
SMC4-225ENST00000497203 hDV102S1A0JD36 115 aa3.99□□□□□ -1.77
SMC4-225ENST00000497203 TMEM8BA6NDV4 472 aa3.99□□□□□ -1.77
SMC4-225ENST00000497203 H7C0S8 307 aa3.99□□□□□ -1.77
SMC4-225ENST00000497203 UBE2CO00762 179 aa3.99□□□□□ -1.77
SMC4-225ENST00000497203 IPO8O15397 1037 aaKnown RBP3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms