RNA–Protein interactions for RNA: ENST00000496711.5

GARNL3-220, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 1 (best)

Gene GARNL3, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-220ENST00000496711 RPL26P61254 145 aaKnown RBP12.95□□□□□ -0.34
GARNL3-220ENST00000496711 WDR5P61964 334 aaKnown RBP12.95□□□□□ -0.34
GARNL3-220ENST00000496711 KIF19Q2TAC6 998 aa12.95□□□□□ -0.34
GARNL3-220ENST00000496711 LPCAT4Q643R3 524 aa12.95□□□□□ -0.34
GARNL3-220ENST00000496711 UGT3A1Q6NUS8 523 aa12.95□□□□□ -0.34
GARNL3-220ENST00000496711 DDIASQ8IXT1 998 aa12.95□□□□□ -0.34
GARNL3-220ENST00000496711 CPNE9Q8IYJ1 553 aa12.95□□□□□ -0.34
GARNL3-220ENST00000496711 GPR65Q8IYL9 337 aa12.95□□□□□ -0.34
GARNL3-220ENST00000496711 APCDD1Q8J025 514 aa12.95□□□□□ -0.34
GARNL3-220ENST00000496711 CPXM2Q8N436 756 aa12.95□□□□□ -0.34
GARNL3-220ENST00000496711 RNF148Q8N7C7 305 aa12.95□□□□□ -0.34
GARNL3-220ENST00000496711 TTC16Q8NEE8 873 aa12.95□□□□□ -0.34
GARNL3-220ENST00000496711 ZNF483Q8TF39 744 aaPredicted RBP12.95□□□□□ -0.34
GARNL3-220ENST00000496711 UCMAQ8WVF2 138 aa12.95□□□□□ -0.34
GARNL3-220ENST00000496711 PIH1D2Q8WWB5 315 aa12.95□□□□□ -0.34
GARNL3-220ENST00000496711 ACDQ96AP0 544 aa12.95□□□□□ -0.34
GARNL3-220ENST00000496711 KCNA7Q96RP8 456 aa12.95□□□□□ -0.34
GARNL3-220ENST00000496711 P2RY12Q9H244 342 aa12.95□□□□□ -0.34
GARNL3-220ENST00000496711 SEMA4BQ9NPR2 832 aaPredicted RBP12.95□□□□□ -0.34
GARNL3-220ENST00000496711 ADA2Q9NZK5 511 aa12.95□□□□□ -0.34
GARNL3-220ENST00000496711 C6orf203Q9P0P8 240 aaPredicted RBP12.95□□□□□ -0.34
GARNL3-220ENST00000496711 SUCOQ9UBS9 1254 aaKnown RBP12.95□□□□□ -0.34
GARNL3-220ENST00000496711 ZNF510Q9Y2H8 683 aa12.95□□□□□ -0.34
GARNL3-220ENST00000496711 PCDHB1Q9Y5F3 818 aa12.95□□□□□ -0.34
GARNL3-220ENST00000496711 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.94□□□□□ -0.34
GARNL3-220ENST00000496711 GOLGA8CPA6NN73 597 aa12.94□□□□□ -0.34
GARNL3-220ENST00000496711 BBIP1A8MTZ0 92 aa12.94□□□□□ -0.34
GARNL3-220ENST00000496711 K7ERQ8 282 aa12.94□□□□□ -0.34
GARNL3-220ENST00000496711 CRCPO75575 148 aa12.94□□□□□ -0.34
GARNL3-220ENST00000496711 ALPIP09923 528 aa12.94□□□□□ -0.34
GARNL3-220ENST00000496711 SPATA31D3P0C874 917 aa12.94□□□□□ -0.34
GARNL3-220ENST00000496711 CA8P35219 290 aa12.94□□□□□ -0.34
GARNL3-220ENST00000496711 MAPK8P45983 427 aa12.94□□□□□ -0.34
GARNL3-220ENST00000496711 MRPS22P82650 360 aaKnown RBP12.94□□□□□ -0.34
GARNL3-220ENST00000496711 HACD2Q6Y1H2 254 aa12.94□□□□□ -0.34
GARNL3-220ENST00000496711 SPATA31D4Q6ZUB0 917 aa12.94□□□□□ -0.34
GARNL3-220ENST00000496711 PHYKPLQ8IUZ5 450 aa12.94□□□□□ -0.34
GARNL3-220ENST00000496711 PQLC1Q8N2U9 271 aa12.94□□□□□ -0.34
GARNL3-220ENST00000496711 PLCD3Q8N3E9 789 aa12.94□□□□□ -0.34
GARNL3-220ENST00000496711 PCDH20Q8N6Y1 951 aaKnown RBP12.94□□□□□ -0.34
GARNL3-220ENST00000496711 SNX31Q8N9S9 440 aa12.94□□□□□ -0.34
GARNL3-220ENST00000496711 OR9I1Q8NGQ6 314 aa12.94□□□□□ -0.34
GARNL3-220ENST00000496711 DIS3LQ8TF46 1054 aaKnown RBP12.94□□□□□ -0.34
GARNL3-220ENST00000496711 EEF1AKMT1Q8WVE0 214 aa12.94□□□□□ -0.34
GARNL3-220ENST00000496711 MIEF2Q96C03 454 aa12.94□□□□□ -0.34
GARNL3-220ENST00000496711 ASB9Q96DX5 294 aa12.94□□□□□ -0.34
GARNL3-220ENST00000496711 NUSAP1Q9BXS6 441 aaKnown RBP12.94□□□□□ -0.34
GARNL3-220ENST00000496711 CRISPLD2Q9H0B8 497 aa12.94□□□□□ -0.34
GARNL3-220ENST00000496711 PCTPQ9UKL6 214 aa12.94□□□□□ -0.34
GARNL3-220ENST00000496711 SH3BP1Q9Y3L3 701 aa12.94□□□□□ -0.34
GARNL3-220ENST00000496711 PTGDR2Q9Y5Y4 395 aa12.94□□□□□ -0.34
GARNL3-220ENST00000496711 PLXNB3Q9ULL4 1909 aa12.94□□□□□ -0.34
GARNL3-220ENST00000496711 A6NHS1 94 aa12.93□□□□□ -0.34
GARNL3-220ENST00000496711 NCF1BA6NI72 391 aaPredicted RBP12.93□□□□□ -0.34
GARNL3-220ENST00000496711 NCF1CA8MVU1 366 aaPredicted RBP12.93□□□□□ -0.34
GARNL3-220ENST00000496711 ACOT8O14734 319 aa12.93□□□□□ -0.34
GARNL3-220ENST00000496711 PRMT5O14744 637 aaPredicted RBP12.93□□□□□ -0.34
GARNL3-220ENST00000496711 GPR39O43194 453 aa12.93□□□□□ -0.34
GARNL3-220ENST00000496711 SMAD6O43541 496 aaKnown RBP12.93□□□□□ -0.34
GARNL3-220ENST00000496711 PEX1O43933 1283 aa12.93□□□□□ -0.34
GARNL3-220ENST00000496711 NRP2O60462 931 aa12.93□□□□□ -0.34
GARNL3-220ENST00000496711 SNX2O60749 519 aa12.93□□□□□ -0.34
GARNL3-220ENST00000496711 LILRB3O75022 631 aa12.93□□□□□ -0.34
GARNL3-220ENST00000496711 VPS4BO75351 444 aa12.93□□□□□ -0.34
GARNL3-220ENST00000496711 PRAMEF12O95522 483 aa12.93□□□□□ -0.34
GARNL3-220ENST00000496711 LRG1P02750 347 aa12.93□□□□□ -0.34
GARNL3-220ENST00000496711 NCF1P14598 390 aaPredicted RBP12.93□□□□□ -0.34
GARNL3-220ENST00000496711 GPX3P22352 226 aa12.93□□□□□ -0.34
GARNL3-220ENST00000496711 CSNK1DP48730 415 aa12.93□□□□□ -0.34
GARNL3-220ENST00000496711 CLCN7P51798 805 aa12.93□□□□□ -0.34
GARNL3-220ENST00000496711 SLC7A9P82251 487 aa12.93□□□□□ -0.34
GARNL3-220ENST00000496711 MS4A2Q01362 244 aa12.93□□□□□ -0.34
GARNL3-220ENST00000496711 BCL2L1Q07817 233 aa12.93□□□□□ -0.34
GARNL3-220ENST00000496711 LRRC36Q1X8D7 754 aa12.93□□□□□ -0.34
GARNL3-220ENST00000496711 MPPE1Q53F39 396 aa12.93□□□□□ -0.34
GARNL3-220ENST00000496711 TMEM154Q6P9G4 183 aa12.93□□□□□ -0.34
GARNL3-220ENST00000496711 PAOXQ6QHF9 649 aa12.93□□□□□ -0.34
GARNL3-220ENST00000496711 CERS6Q6ZMG9 384 aa12.93□□□□□ -0.34
GARNL3-220ENST00000496711 HTR3DQ70Z44 454 aa12.93□□□□□ -0.34
GARNL3-220ENST00000496711 GAREM2Q75VX8 874 aa12.93□□□□□ -0.34
GARNL3-220ENST00000496711 EFL1Q7Z2Z2 1120 aaKnown RBP12.93□□□□□ -0.34
GARNL3-220ENST00000496711 GPSM1Q86YR5 675 aa12.93□□□□□ -0.34
GARNL3-220ENST00000496711 TMC8Q8IU68 726 aa12.93□□□□□ -0.34
GARNL3-220ENST00000496711 CAMK1DQ8IU85 385 aa12.93□□□□□ -0.34
GARNL3-220ENST00000496711 OR6K2Q8NGY2 324 aa12.93□□□□□ -0.34
GARNL3-220ENST00000496711 PPP2R3CQ969Q6 453 aa12.93□□□□□ -0.34
GARNL3-220ENST00000496711 EID2BQ96D98 161 aa12.93□□□□□ -0.34
GARNL3-220ENST00000496711 NR1H4Q96RI1 486 aaPredicted RBP12.93□□□□□ -0.34
GARNL3-220ENST00000496711 ZBP1Q9H171 429 aa12.93□□□□□ -0.34
GARNL3-220ENST00000496711 VCXQ9H320 206 aa12.93□□□□□ -0.34
GARNL3-220ENST00000496711 TUBB1Q9H4B7 451 aa12.93□□□□□ -0.34
GARNL3-220ENST00000496711 SARS2Q9NP81 518 aaKnown RBP12.93□□□□□ -0.34
GARNL3-220ENST00000496711 SPAG4Q9NPE6 437 aa12.93□□□□□ -0.34
GARNL3-220ENST00000496711 NUDT4Q9NZJ9 180 aa12.93□□□□□ -0.34
GARNL3-220ENST00000496711 CFAP97Q9P2B7 532 aa12.93□□□□□ -0.34
GARNL3-220ENST00000496711 POLG2Q9UHN1 485 aa12.93□□□□□ -0.34
GARNL3-220ENST00000496711 EVLQ9UI08 416 aaPredicted RBP12.93□□□□□ -0.34
GARNL3-220ENST00000496711 BTRCQ9Y297 605 aa12.93□□□□□ -0.34
GARNL3-220ENST00000496711 PIKFYVEQ9Y2I7 2098 aa12.93□□□□□ -0.34
GARNL3-220ENST00000496711 MTCL1Q9Y4B5 1905 aaKnown RBP12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms