RNA–Protein interactions for RNA: ENST00000496152.1

NDUFAF3-206, Transcript of NADH:ubiquinone oxidoreductase complex assembly factor 3, humanhuman

TSL 2

Gene NDUFAF3, Length 826 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFAF3-206ENST00000496152 ERAP2Q6P179 960 aa11.9□□□□□ -0.5
NDUFAF3-206ENST00000496152 ARHGAP22Q7Z5H3 698 aa11.9□□□□□ -0.5
NDUFAF3-206ENST00000496152 KATNAL2Q8IYT4 538 aa11.9□□□□□ -0.5
NDUFAF3-206ENST00000496152 ESX1Q8N693 406 aa11.9□□□□□ -0.5
NDUFAF3-206ENST00000496152 KCTD6Q8NC69 237 aa11.9□□□□□ -0.5
NDUFAF3-206ENST00000496152 UBE2Q2Q8WVN8 375 aa11.9□□□□□ -0.5
NDUFAF3-206ENST00000496152 KRT35Q92764 455 aa11.9□□□□□ -0.5
NDUFAF3-206ENST00000496152 ZNF670Q9BS34 389 aa11.9□□□□□ -0.5
NDUFAF3-206ENST00000496152 ZNF768Q9H5H4 540 aaKnown RBP11.9□□□□□ -0.5
NDUFAF3-206ENST00000496152 CATSPERBQ9H7T0 1116 aa11.9□□□□□ -0.5
NDUFAF3-206ENST00000496152 TRNAU1APQ9NX07 287 aaKnown RBP11.9□□□□□ -0.5
NDUFAF3-206ENST00000496152 DDX56Q9NY93 547 aaKnown RBP11.9□□□□□ -0.5
NDUFAF3-206ENST00000496152 DONSONQ9NYP3 566 aa11.9□□□□□ -0.5
NDUFAF3-206ENST00000496152 DNAI1Q9UI46 699 aa11.9□□□□□ -0.5
NDUFAF3-206ENST00000496152 GUCA1BQ9UMX6 200 aa11.9□□□□□ -0.5
NDUFAF3-206ENST00000496152 POLHQ9Y253 713 aa11.9□□□□□ -0.5
NDUFAF3-206ENST00000496152 RPS6KL1Q9Y6S9 549 aa11.9□□□□□ -0.5
NDUFAF3-206ENST00000496152 H3BRJ5 948 aa11.89□□□□□ -0.51
NDUFAF3-206ENST00000496152 RAMP2O60895 175 aa11.89□□□□□ -0.51
NDUFAF3-206ENST00000496152 FUCA1P04066 466 aa11.89□□□□□ -0.51
NDUFAF3-206ENST00000496152 FURINP09958 794 aa11.89□□□□□ -0.51
NDUFAF3-206ENST00000496152 AMPD1P23109 780 aa11.89□□□□□ -0.51
NDUFAF3-206ENST00000496152 CTNNA2P26232 953 aa11.89□□□□□ -0.51
NDUFAF3-206ENST00000496152 MMP12P39900 470 aa11.89□□□□□ -0.51
NDUFAF3-206ENST00000496152 ARL4AP40617 200 aa11.89□□□□□ -0.51
NDUFAF3-206ENST00000496152 MARCKSL1P49006 195 aa11.89□□□□□ -0.51
NDUFAF3-206ENST00000496152 NDST2P52849 883 aa11.89□□□□□ -0.51
NDUFAF3-206ENST00000496152 PMS2P54278 862 aa11.89□□□□□ -0.51
NDUFAF3-206ENST00000496152 NAP1L1P55209 391 aaKnown RBP11.89□□□□□ -0.51
NDUFAF3-206ENST00000496152 YBEYP58557 167 aaPredicted RBP11.89□□□□□ -0.51
NDUFAF3-206ENST00000496152 RHOAP61586 193 aa11.89□□□□□ -0.51
NDUFAF3-206ENST00000496152 GPLD1P80108 840 aa11.89□□□□□ -0.51
NDUFAF3-206ENST00000496152 ILF3Q12906 894 aaKnown RBP eCLIP11.89□□□□□ -0.51
NDUFAF3-206ENST00000496152 MMRN1Q13201 1228 aa11.89□□□□□ -0.51
NDUFAF3-206ENST00000496152 ERV3-1Q14264 604 aa11.89□□□□□ -0.51
NDUFAF3-206ENST00000496152 ANKRD20A8PQ5CZ79 823 aa11.89□□□□□ -0.51
NDUFAF3-206ENST00000496152 PNCKQ6P2M8 343 aa11.89□□□□□ -0.51
NDUFAF3-206ENST00000496152 MAP7D3Q8IWC1 876 aa11.89□□□□□ -0.51
NDUFAF3-206ENST00000496152 ARHGAP12Q8IWW6 846 aa11.89□□□□□ -0.51
NDUFAF3-206ENST00000496152 SYCE1Q8N0S2 351 aa11.89□□□□□ -0.51
NDUFAF3-206ENST00000496152 NAGSQ8N159 534 aa11.89□□□□□ -0.51
NDUFAF3-206ENST00000496152 NPWQ8N729 165 aa11.89□□□□□ -0.51
NDUFAF3-206ENST00000496152 PQLC3Q8N755 202 aa11.89□□□□□ -0.51
NDUFAF3-206ENST00000496152 NETO2Q8NC67 525 aa11.89□□□□□ -0.51
NDUFAF3-206ENST00000496152 PATE1Q8WXA2 126 aa11.89□□□□□ -0.51
NDUFAF3-206ENST00000496152 HES6Q96HZ4 224 aa11.89□□□□□ -0.51
NDUFAF3-206ENST00000496152 LRRC19Q9H756 370 aa11.89□□□□□ -0.51
NDUFAF3-206ENST00000496152 CARS2Q9HA77 564 aaKnown RBP11.89□□□□□ -0.51
NDUFAF3-206ENST00000496152 APMAPQ9HDC9 416 aa11.89□□□□□ -0.51
NDUFAF3-206ENST00000496152 LZTFL1Q9NQ48 299 aa11.89□□□□□ -0.51
NDUFAF3-206ENST00000496152 ETNK2Q9NVF9 386 aa11.89□□□□□ -0.51
NDUFAF3-206ENST00000496152 PYCARDQ9ULZ3 195 aa11.89□□□□□ -0.51
NDUFAF3-206ENST00000496152 ATP8A1Q9Y2Q0 1164 aa11.89□□□□□ -0.51
NDUFAF3-206ENST00000496152 CCDC66A2RUB6 948 aa11.88□□□□□ -0.51
NDUFAF3-206ENST00000496152 A8MU76 341 aa11.88□□□□□ -0.51
NDUFAF3-206ENST00000496152 TCP11X1B4DZS4 312 aa11.88□□□□□ -0.51
NDUFAF3-206ENST00000496152 DDX3YO15523 660 aaKnown RBP11.88□□□□□ -0.51
NDUFAF3-206ENST00000496152 PIGNO95427 931 aa11.88□□□□□ -0.51
NDUFAF3-206ENST00000496152 RECKO95980 971 aa11.88□□□□□ -0.51
NDUFAF3-206ENST00000496152 LDLRP01130 860 aa11.88□□□□□ -0.51
NDUFAF3-206ENST00000496152 CEACAM5P06731 702 aa11.88□□□□□ -0.51
NDUFAF3-206ENST00000496152 AK4P27144 223 aaPredicted RBP11.88□□□□□ -0.51
NDUFAF3-206ENST00000496152 CDKN2BP42772 138 aa11.88□□□□□ -0.51
NDUFAF3-206ENST00000496152 PEX6Q13608 980 aa11.88□□□□□ -0.51
NDUFAF3-206ENST00000496152 KRT81Q14533 505 aa11.88□□□□□ -0.51
NDUFAF3-206ENST00000496152 CYTH1Q15438 398 aa11.88□□□□□ -0.51
NDUFAF3-206ENST00000496152 PARP15Q460N3 678 aa11.88□□□□□ -0.51
NDUFAF3-206ENST00000496152 BRAT1Q6PJG6 821 aa11.88□□□□□ -0.51
NDUFAF3-206ENST00000496152 APLFQ8IW19 511 aaPredicted RBP11.88□□□□□ -0.51
NDUFAF3-206ENST00000496152 EXD1Q8NHP7 514 aa11.88□□□□□ -0.51
NDUFAF3-206ENST00000496152 ALG3Q92685 438 aa11.88□□□□□ -0.51
NDUFAF3-206ENST00000496152 ZNF641Q96N77 438 aaPredicted RBP11.88□□□□□ -0.51
NDUFAF3-206ENST00000496152 RNF157Q96PX1 679 aa11.88□□□□□ -0.51
NDUFAF3-206ENST00000496152 WDR26Q9H7D7 661 aa11.88□□□□□ -0.51
NDUFAF3-206ENST00000496152 KCND1Q9NSA2 647 aa11.88□□□□□ -0.51
NDUFAF3-206ENST00000496152 ST14Q9Y5Y6 855 aa11.88□□□□□ -0.51
NDUFAF3-206ENST00000496152 LRRD1A4D1F6 860 aa11.87□□□□□ -0.51
NDUFAF3-206ENST00000496152 USP27XA6NNY8 438 aa11.87□□□□□ -0.51
NDUFAF3-206ENST00000496152 MIF4GDA9UHW6 222 aaKnown RBP11.87□□□□□ -0.51
NDUFAF3-206ENST00000496152 POLR1CO15160 346 aaPredicted RBP11.87□□□□□ -0.51
NDUFAF3-206ENST00000496152 INPP4BO15327 924 aa11.87□□□□□ -0.51
NDUFAF3-206ENST00000496152 DAPK3O43293 454 aa11.87□□□□□ -0.51
NDUFAF3-206ENST00000496152 ZSCAN12O43309 604 aa11.87□□□□□ -0.51
NDUFAF3-206ENST00000496152 SORBS2O94875 1100 aaKnown RBP11.87□□□□□ -0.51
NDUFAF3-206ENST00000496152 ZRANB2O95218 330 aaKnown RBP eCLIP11.87□□□□□ -0.51
NDUFAF3-206ENST00000496152 GM2AP17900 193 aa11.87□□□□□ -0.51
NDUFAF3-206ENST00000496152 GJC1P36383 396 aa11.87□□□□□ -0.51
NDUFAF3-206ENST00000496152 DLSTP36957 453 aa11.87□□□□□ -0.51
NDUFAF3-206ENST00000496152 CTBSQ01459 385 aa11.87□□□□□ -0.51
NDUFAF3-206ENST00000496152 MRPL49Q13405 166 aaKnown RBP11.87□□□□□ -0.51
NDUFAF3-206ENST00000496152 GRM3Q14832 879 aa11.87□□□□□ -0.51
NDUFAF3-206ENST00000496152 PAFAH1B3Q15102 231 aaKnown RBP11.87□□□□□ -0.51
NDUFAF3-206ENST00000496152 INPP5JQ15735 1006 aaPredicted RBP11.87□□□□□ -0.51
NDUFAF3-206ENST00000496152 NADK2Q4G0N4 442 aa11.87□□□□□ -0.51
NDUFAF3-206ENST00000496152 SNAP47Q5SQN1 464 aa11.87□□□□□ -0.51
NDUFAF3-206ENST00000496152 MEI1Q5TIA1 1274 aa11.87□□□□□ -0.51
NDUFAF3-206ENST00000496152 NCBP2-AS2Q69YL0 99 aa11.87□□□□□ -0.51
NDUFAF3-206ENST00000496152 SLC9A4Q6AI14 798 aa11.87□□□□□ -0.51
NDUFAF3-206ENST00000496152 SLC30A9Q6PML9 568 aa11.87□□□□□ -0.51
NDUFAF3-206ENST00000496152 WDR74Q6RFH5 385 aaPredicted RBP11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms