RNA–Protein interactions for RNA: ENST00000495528.1

VIM-207, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 962 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-207ENST00000495528 BRSK2Q8IWQ3 736 aa6.7□□□□□ -1.34
VIM-207ENST00000495528 SLC15A3Q8IY34 581 aa6.7□□□□□ -1.34
VIM-207ENST00000495528 ADGRF2Q8IZF7 708 aa6.7□□□□□ -1.34
VIM-207ENST00000495528 ALLCQ8N6M5 410 aa6.7□□□□□ -1.34
VIM-207ENST00000495528 LRRC52Q8N7C0 313 aa6.7□□□□□ -1.34
VIM-207ENST00000495528 IL17RCQ8NAC3 791 aa6.7□□□□□ -1.34
VIM-207ENST00000495528 SPATA20Q8TB22 786 aa6.7□□□□□ -1.34
VIM-207ENST00000495528 TMEM171Q8WVE6 324 aa6.7□□□□□ -1.34
VIM-207ENST00000495528 FKBP10Q96AY3 582 aa6.7□□□□□ -1.34
VIM-207ENST00000495528 PPP1R9BQ96SB3 815 aa6.7□□□□□ -1.34
VIM-207ENST00000495528 CHST8Q9H2A9 424 aa6.7□□□□□ -1.34
VIM-207ENST00000495528 TOR3AQ9H497 397 aa6.7□□□□□ -1.34
VIM-207ENST00000495528 MRPL44Q9H9J2 332 aaKnown RBP6.7□□□□□ -1.34
VIM-207ENST00000495528 PDE11AQ9HCR9 933 aa6.7□□□□□ -1.34
VIM-207ENST00000495528 ZDHHC4Q9NPG8 344 aa6.7□□□□□ -1.34
VIM-207ENST00000495528 FSCN3Q9NQT6 498 aa6.7□□□□□ -1.34
VIM-207ENST00000495528 TBC1D23Q9NUY8 699 aa6.7□□□□□ -1.34
VIM-207ENST00000495528 EXOC1Q9NV70 894 aa6.7□□□□□ -1.34
VIM-207ENST00000495528 RMND1Q9NWS8 449 aa6.7□□□□□ -1.34
VIM-207ENST00000495528 GDAP2Q9NXN4 497 aa6.7□□□□□ -1.34
VIM-207ENST00000495528 RBAKQ9NYW8 714 aaPredicted RBP6.7□□□□□ -1.34
VIM-207ENST00000495528 DKK3Q9UBP4 350 aa6.7□□□□□ -1.34
VIM-207ENST00000495528 SIX4Q9UIU6 781 aa6.7□□□□□ -1.34
VIM-207ENST00000495528 MID2Q9UJV3 735 aa6.7□□□□□ -1.34
VIM-207ENST00000495528 PAXBP1Q9Y5B6 917 aa6.7□□□□□ -1.34
VIM-207ENST00000495528 EML5Q05BV3 1969 aa6.69□□□□□ -1.34
VIM-207ENST00000495528 FRYQ5TBA9 3013 aa6.69□□□□□ -1.34
VIM-207ENST00000495528 TSC2P49815 1807 aa6.69□□□□□ -1.34
VIM-207ENST00000495528 A0A087X1B8 175 aa6.69□□□□□ -1.34
VIM-207ENST00000495528 SPAARA0A1B0GVQ0 90 aa6.69□□□□□ -1.34
VIM-207ENST00000495528 TMEM8BA6NDV4 472 aa6.69□□□□□ -1.34
VIM-207ENST00000495528 ZNF840PA6NDX5 716 aa6.69□□□□□ -1.34
VIM-207ENST00000495528 TAF4O00268 1085 aa6.69□□□□□ -1.34
VIM-207ENST00000495528 RHOBTB3O94955 611 aa6.69□□□□□ -1.34
VIM-207ENST00000495528 KAT7O95251 611 aa6.69□□□□□ -1.34
VIM-207ENST00000495528 RASAL1O95294 804 aa6.69□□□□□ -1.34
VIM-207ENST00000495528 LDHAP00338 332 aaKnown RBP6.69□□□□□ -1.34
VIM-207ENST00000495528 ERBB2P04626 1255 aa6.69□□□□□ -1.34
VIM-207ENST00000495528 ENGP17813 658 aa6.69□□□□□ -1.34
VIM-207ENST00000495528 BDNFP23560 247 aa6.69□□□□□ -1.34
VIM-207ENST00000495528 PPIFP30405 207 aaKnown RBP6.69□□□□□ -1.34
VIM-207ENST00000495528 PRCPP42785 496 aa6.69□□□□□ -1.34
VIM-207ENST00000495528 MAGEA11P43364 429 aa6.69□□□□□ -1.34
VIM-207ENST00000495528 CARSP49589 748 aaKnown RBP6.69□□□□□ -1.34
VIM-207ENST00000495528 CASP5P51878 434 aa6.69□□□□□ -1.34
VIM-207ENST00000495528 SLC7A9P82251 487 aa6.69□□□□□ -1.34
VIM-207ENST00000495528 RBP5P82980 135 aa6.69□□□□□ -1.34
VIM-207ENST00000495528 LMAN2Q12907 356 aa6.69□□□□□ -1.34
VIM-207ENST00000495528 DAG1Q14118 895 aa6.69□□□□□ -1.34
VIM-207ENST00000495528 PTCHD3Q3KNS1 767 aa6.69□□□□□ -1.34
VIM-207ENST00000495528 L1TD1Q5T7N2 865 aaKnown RBP6.69□□□□□ -1.34
VIM-207ENST00000495528 ZNF658Q5TYW1 1059 aaPredicted RBP6.69□□□□□ -1.34
VIM-207ENST00000495528 KLHL10Q6JEL2 608 aa6.69□□□□□ -1.34
VIM-207ENST00000495528 VSTM1Q6UX27 236 aa6.69□□□□□ -1.34
VIM-207ENST00000495528 C4orf50Q6ZRC1 276 aa6.69□□□□□ -1.34
VIM-207ENST00000495528 DENND5BQ6ZUT9 1274 aa6.69□□□□□ -1.34
VIM-207ENST00000495528 LPCAT2Q7L5N7 544 aa6.69□□□□□ -1.34
VIM-207ENST00000495528 DEFB119Q8N690 84 aa6.69□□□□□ -1.34
VIM-207ENST00000495528 SPATA18Q8TC71 538 aa6.69□□□□□ -1.34
VIM-207ENST00000495528 ATG4AQ8WYN0 398 aa6.69□□□□□ -1.34
VIM-207ENST00000495528 MYLPFQ96A32 169 aa6.69□□□□□ -1.34
VIM-207ENST00000495528 HVCN1Q96D96 273 aa6.69□□□□□ -1.34
VIM-207ENST00000495528 SPATA17Q96L03 361 aa6.69□□□□□ -1.34
VIM-207ENST00000495528 SNX22Q96L94 193 aa6.69□□□□□ -1.34
VIM-207ENST00000495528 SORCS2Q96PQ0 1159 aa6.69□□□□□ -1.34
VIM-207ENST00000495528 ACCSQ96QU6 501 aa6.69□□□□□ -1.34
VIM-207ENST00000495528 SYT15Q9BQS2 421 aa6.69□□□□□ -1.34
VIM-207ENST00000495528 CBWD1Q9BRT8 395 aa6.69□□□□□ -1.34
VIM-207ENST00000495528 NUSAP1Q9BXS6 441 aaKnown RBP6.69□□□□□ -1.34
VIM-207ENST00000495528 FGFBP2Q9BYJ0 223 aa6.69□□□□□ -1.34
VIM-207ENST00000495528 UNKQ9C0B0 810 aaKnown RBP6.69□□□□□ -1.34
VIM-207ENST00000495528 MTMR12Q9C0I1 747 aa6.69□□□□□ -1.34
VIM-207ENST00000495528 SLC32A1Q9H598 525 aa6.69□□□□□ -1.34
VIM-207ENST00000495528 KLC4Q9NSK0 619 aa6.69□□□□□ -1.34
VIM-207ENST00000495528 ANO10Q9NW15 660 aa6.69□□□□□ -1.34
VIM-207ENST00000495528 KLK13Q9UKR3 277 aa6.69□□□□□ -1.34
VIM-207ENST00000495528 ITGA11Q9UKX5 1188 aa6.69□□□□□ -1.34
VIM-207ENST00000495528 CDH9Q9ULB4 789 aa6.69□□□□□ -1.34
VIM-207ENST00000495528 NEUROG3Q9Y4Z2 214 aa6.69□□□□□ -1.34
VIM-207ENST00000495528 CPQQ9Y646 472 aa6.69□□□□□ -1.34
VIM-207ENST00000495528 FAM208BQ5VWN6 2430 aa6.69□□□□□ -1.34
VIM-207ENST00000495528 ATXN2Q99700 1313 aaKnown RBP6.69□□□□□ -1.34
VIM-207ENST00000495528 CEP295Q9C0D2 2601 aa6.68□□□□□ -1.34
VIM-207ENST00000495528 GON4LQ3T8J9 2241 aa6.68□□□□□ -1.34
VIM-207ENST00000495528 ATRXP46100 2492 aa6.68□□□□□ -1.34
VIM-207ENST00000495528 LOC102723971A0A1B0GUV8 181 aa6.68□□□□□ -1.34
VIM-207ENST00000495528 FRMD3A2A2Y4 597 aa6.68□□□□□ -1.34
VIM-207ENST00000495528 MPPED1O15442 326 aa6.68□□□□□ -1.34
VIM-207ENST00000495528 RGS10O43665 173 aa6.68□□□□□ -1.34
VIM-207ENST00000495528 GCNT3O95395 438 aa6.68□□□□□ -1.34
VIM-207ENST00000495528 OLFM2O95897 454 aa6.68□□□□□ -1.34
VIM-207ENST00000495528 MT-ND5P03915 603 aa6.68□□□□□ -1.34
VIM-207ENST00000495528 APODP05090 189 aa6.68□□□□□ -1.34
VIM-207ENST00000495528 TMEM191BP0C7N4 346 aa6.68□□□□□ -1.34
VIM-207ENST00000495528 NR2F6P10588 404 aa6.68□□□□□ -1.34
VIM-207ENST00000495528 CXCR5P32302 372 aa6.68□□□□□ -1.34
VIM-207ENST00000495528 EIF2DP41214 584 aaKnown RBP6.68□□□□□ -1.34
VIM-207ENST00000495528 PDE6CP51160 858 aa6.68□□□□□ -1.34
VIM-207ENST00000495528 CLCN2P51788 898 aa6.68□□□□□ -1.34
VIM-207ENST00000495528 MAPK10P53779 464 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms