RNA–Protein interactions for RNA: ENST00000489563.1

AC055855.1-201, humanhuman

BASIC

Gene AC055855.1, Length 579 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055855.1-201ENST00000489563 TSPAN33Q86UF1 283 aa3.49□□□□□ -1.85
AC055855.1-201ENST00000489563 CCDC190Q86UF4 302 aa3.49□□□□□ -1.85
AC055855.1-201ENST00000489563 GPR180Q86V85 440 aa3.49□□□□□ -1.85
AC055855.1-201ENST00000489563 EPHX4Q8IUS5 362 aa3.49□□□□□ -1.85
AC055855.1-201ENST00000489563 ARID3BQ8IVW6 561 aaPredicted RBP3.49□□□□□ -1.85
AC055855.1-201ENST00000489563 CHERPQ8IWX8 916 aaKnown RBP3.49□□□□□ -1.85
AC055855.1-201ENST00000489563 OR2AK2Q8NG84 335 aa3.49□□□□□ -1.85
AC055855.1-201ENST00000489563 HMGCLL1Q8TB92 370 aa3.49□□□□□ -1.85
AC055855.1-201ENST00000489563 TANKQ92844 425 aa3.49□□□□□ -1.85
AC055855.1-201ENST00000489563 MED30Q96HR3 178 aa3.49□□□□□ -1.85
AC055855.1-201ENST00000489563 LYZL4Q96KX0 146 aa3.49□□□□□ -1.85
AC055855.1-201ENST00000489563 SEMA3CQ99985 751 aa3.49□□□□□ -1.85
AC055855.1-201ENST00000489563 TEX12Q9BXU0 123 aa3.49□□□□□ -1.85
AC055855.1-201ENST00000489563 TM6SF1Q9BZW5 370 aa3.49□□□□□ -1.85
AC055855.1-201ENST00000489563 TMEM39BQ9GZU3 492 aa3.49□□□□□ -1.85
AC055855.1-201ENST00000489563 HIPK2Q9H2X6 1198 aa3.49□□□□□ -1.85
AC055855.1-201ENST00000489563 HRH4Q9H3N8 390 aa3.49□□□□□ -1.85
AC055855.1-201ENST00000489563 MAGIXQ9H6Y5 334 aa3.49□□□□□ -1.85
AC055855.1-201ENST00000489563 PCDH9Q9HC56 1237 aa3.49□□□□□ -1.85
AC055855.1-201ENST00000489563 ARHGEF38Q9NXL2 777 aa3.49□□□□□ -1.85
AC055855.1-201ENST00000489563 MCM9Q9NXL9 1143 aa3.49□□□□□ -1.85
AC055855.1-201ENST00000489563 FBXL2Q9UKC9 423 aa3.49□□□□□ -1.85
AC055855.1-201ENST00000489563 KLHL20Q9Y2M5 609 aa3.49□□□□□ -1.85
AC055855.1-201ENST00000489563 SNX8Q9Y5X2 465 aa3.49□□□□□ -1.85
AC055855.1-201ENST00000489563 KAT6BQ8WYB5 2073 aa3.48□□□□□ -1.85
AC055855.1-201ENST00000489563 CLEC18AA5D8T8 446 aa3.48□□□□□ -1.85
AC055855.1-201ENST00000489563 A8MV72 311 aaPredicted RBP3.48□□□□□ -1.85
AC055855.1-201ENST00000489563 SMAD9O15198 467 aaKnown RBP3.48□□□□□ -1.85
AC055855.1-201ENST00000489563 KCNN4O15554 427 aa3.48□□□□□ -1.85
AC055855.1-201ENST00000489563 SMAD6O43541 496 aaKnown RBP3.48□□□□□ -1.85
AC055855.1-201ENST00000489563 MITFO75030 526 aaPredicted RBP3.48□□□□□ -1.85
AC055855.1-201ENST00000489563 RFPL2O75678 378 aa3.48□□□□□ -1.85
AC055855.1-201ENST00000489563 KDM4BO94953 1096 aa3.48□□□□□ -1.85
AC055855.1-201ENST00000489563 PAPSS2O95340 614 aaPredicted RBP3.48□□□□□ -1.85
AC055855.1-201ENST00000489563 HSP90AA1P07900 732 aaKnown RBP3.48□□□□□ -1.85
AC055855.1-201ENST00000489563 FASLGP48023 281 aa3.48□□□□□ -1.85
AC055855.1-201ENST00000489563 NRIP1P48552 1158 aa3.48□□□□□ -1.85
AC055855.1-201ENST00000489563 RRP1P56182 461 aaKnown RBP3.48□□□□□ -1.85
AC055855.1-201ENST00000489563 DSCR9P59020 149 aa3.48□□□□□ -1.85
AC055855.1-201ENST00000489563 TAS2R38P59533 333 aa3.48□□□□□ -1.85
AC055855.1-201ENST00000489563 SEC61A1P61619 476 aaKnown RBP3.48□□□□□ -1.85
AC055855.1-201ENST00000489563 ZNF155Q12901 538 aaPredicted RBP3.48□□□□□ -1.85
AC055855.1-201ENST00000489563 TNFAIP1Q13829 316 aa3.48□□□□□ -1.85
AC055855.1-201ENST00000489563 NFATC4Q14934 902 aa3.48□□□□□ -1.85
AC055855.1-201ENST00000489563 SLC39A14Q15043 492 aa3.48□□□□□ -1.85
AC055855.1-201ENST00000489563 SF3B4Q15427 424 aaKnown RBP eCLIP3.48□□□□□ -1.85
AC055855.1-201ENST00000489563 DECR1Q16698 335 aa3.48□□□□□ -1.85
AC055855.1-201ENST00000489563 MYLK3Q32MK0 819 aa3.48□□□□□ -1.85
AC055855.1-201ENST00000489563 RARS2Q5T160 578 aaKnown RBP3.48□□□□□ -1.85
AC055855.1-201ENST00000489563 NSUN5P2Q63ZY6 315 aa3.48□□□□□ -1.85
AC055855.1-201ENST00000489563 C18orf63Q68DL7 685 aa3.48□□□□□ -1.85
AC055855.1-201ENST00000489563 ZNF280DQ6N043 979 aa3.48□□□□□ -1.85
AC055855.1-201ENST00000489563 GLCCI1Q86VQ1 547 aa3.48□□□□□ -1.85
AC055855.1-201ENST00000489563 SPATA2LQ8IUW3 424 aaPredicted RBP3.48□□□□□ -1.85
AC055855.1-201ENST00000489563 ZNF34Q8IZ26 560 aa3.48□□□□□ -1.85
AC055855.1-201ENST00000489563 SAMD14Q8IZD0 417 aaPredicted RBP3.48□□□□□ -1.85
AC055855.1-201ENST00000489563 SCYL3Q8IZE3 742 aa3.48□□□□□ -1.85
AC055855.1-201ENST00000489563 ZNF114Q8NC26 417 aa3.48□□□□□ -1.85
AC055855.1-201ENST00000489563 CLEC18CQ8NCF0 446 aa3.48□□□□□ -1.85
AC055855.1-201ENST00000489563 GSDMBQ8TAX9 411 aa3.48□□□□□ -1.85
AC055855.1-201ENST00000489563 TRPC4APQ8TEL6 797 aa3.48□□□□□ -1.85
AC055855.1-201ENST00000489563 DNAAF4Q8WXU2 420 aa3.48□□□□□ -1.85
AC055855.1-201ENST00000489563 TAAR8Q969N4 342 aa3.48□□□□□ -1.85
AC055855.1-201ENST00000489563 RHBDF1Q96CC6 855 aa3.48□□□□□ -1.85
AC055855.1-201ENST00000489563 RTP4Q96DX8 246 aa3.48□□□□□ -1.85
AC055855.1-201ENST00000489563 FAM122AQ96E09 287 aa3.48□□□□□ -1.85
AC055855.1-201ENST00000489563 SMC6Q96SB8 1091 aa3.48□□□□□ -1.85
AC055855.1-201ENST00000489563 WACQ9BTA9 647 aa3.48□□□□□ -1.85
AC055855.1-201ENST00000489563 SMARCAL1Q9NZC9 954 aa3.48□□□□□ -1.85
AC055855.1-201ENST00000489563 MALT1Q9UDY8 824 aa3.48□□□□□ -1.85
AC055855.1-201ENST00000489563 SEC63Q9UGP8 760 aaKnown RBP3.48□□□□□ -1.85
AC055855.1-201ENST00000489563 SIX4Q9UIU6 781 aa3.48□□□□□ -1.85
AC055855.1-201ENST00000489563 DBNLQ9UJU6 430 aaKnown RBP3.48□□□□□ -1.85
AC055855.1-201ENST00000489563 TNFRSF18Q9Y5U5 241 aa3.48□□□□□ -1.85
AC055855.1-201ENST00000489563 TAF1P21675 1872 aa3.47□□□□□ -1.85
AC055855.1-201ENST00000489563 SETXQ7Z333 2677 aaKnown RBP3.47□□□□□ -1.85
AC055855.1-201ENST00000489563 TRIP12Q14669 1992 aaPredicted RBP3.47□□□□□ -1.85
AC055855.1-201ENST00000489563 MAST4O15021 2626 aa3.47□□□□□ -1.85
AC055855.1-201ENST00000489563 OR2A25A4D2G3 310 aa3.47□□□□□ -1.85
AC055855.1-201ENST00000489563 MAP2K7O14733 419 aa3.47□□□□□ -1.85
AC055855.1-201ENST00000489563 MID1O15344 667 aa3.47□□□□□ -1.85
AC055855.1-201ENST00000489563 TMCC2O75069 709 aa3.47□□□□□ -1.85
AC055855.1-201ENST00000489563 TUBBP07437 444 aa3.47□□□□□ -1.85
AC055855.1-201ENST00000489563 SELLP14151 372 aa3.47□□□□□ -1.85
AC055855.1-201ENST00000489563 MMP9P14780 707 aa3.47□□□□□ -1.85
AC055855.1-201ENST00000489563 DAOP14920 347 aa3.47□□□□□ -1.85
AC055855.1-201ENST00000489563 APOBEC1P41238 236 aaKnown RBP3.47□□□□□ -1.85
AC055855.1-201ENST00000489563 TMPOP42166 694 aaKnown RBP3.47□□□□□ -1.85
AC055855.1-201ENST00000489563 RAD52P43351 418 aa3.47□□□□□ -1.85
AC055855.1-201ENST00000489563 THBS3P49746 956 aa3.47□□□□□ -1.85
AC055855.1-201ENST00000489563 PDLIM4P50479 330 aa3.47□□□□□ -1.85
AC055855.1-201ENST00000489563 FOXG1P55316 489 aaPredicted RBP3.47□□□□□ -1.85
AC055855.1-201ENST00000489563 NANOS2P60321 138 aaKnown RBP3.47□□□□□ -1.85
AC055855.1-201ENST00000489563 NUCB1Q02818 461 aa3.47□□□□□ -1.85
AC055855.1-201ENST00000489563 DLG1Q12959 904 aa3.47□□□□□ -1.85
AC055855.1-201ENST00000489563 NTRK2Q16620 822 aa3.47□□□□□ -1.85
AC055855.1-201ENST00000489563 BRAT1Q6PJG6 821 aa3.47□□□□□ -1.85
AC055855.1-201ENST00000489563 C16orf54Q6UWD8 224 aa3.47□□□□□ -1.85
AC055855.1-201ENST00000489563 ZDHHC17Q8IUH5 632 aa3.47□□□□□ -1.85
AC055855.1-201ENST00000489563 EMC1Q8N766 993 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms