RNA–Protein interactions for RNA: ENST00000489028.1

RFC4-213, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-213ENST00000489028 FAM149B1Q96BN6 582 aa3.52□□□□□ -1.85
RFC4-213ENST00000489028 EGLN2Q96KS0 407 aa3.52□□□□□ -1.85
RFC4-213ENST00000489028 NEUROD6Q96NK8 337 aa3.52□□□□□ -1.85
RFC4-213ENST00000489028 LRRC1Q9BTT6 524 aa3.52□□□□□ -1.85
RFC4-213ENST00000489028 SLC26A6Q9BXS9 759 aa3.52□□□□□ -1.85
RFC4-213ENST00000489028 PDZD7Q9H5P4 517 aa3.52□□□□□ -1.85
RFC4-213ENST00000489028 HCFC1R1Q9NWW0 138 aa3.52□□□□□ -1.85
RFC4-213ENST00000489028 KLHL9Q9P2J3 617 aa3.52□□□□□ -1.85
RFC4-213ENST00000489028 OR14J1Q9UGF5 321 aa3.52□□□□□ -1.85
RFC4-213ENST00000489028 KCNE2Q9Y6J6 123 aa3.52□□□□□ -1.85
RFC4-213ENST00000489028 PIAS3Q9Y6X2 628 aa3.52□□□□□ -1.85
RFC4-213ENST00000489028 ZCWPW2A0A1B0GU75 182 aa3.51□□□□□ -1.85
RFC4-213ENST00000489028 FAM237BA0A1B0GVD1 139 aa3.51□□□□□ -1.85
RFC4-213ENST00000489028 CYSRT1A8MQ03 144 aa3.51□□□□□ -1.85
RFC4-213ENST00000489028 PRSS47A8MTI9 375 aa3.51□□□□□ -1.85
RFC4-213ENST00000489028 HS3ST1O14792 307 aa3.51□□□□□ -1.85
RFC4-213ENST00000489028 EIF3DO15371 548 aaKnown RBP eCLIP3.51□□□□□ -1.85
RFC4-213ENST00000489028 KCNN4O15554 427 aa3.51□□□□□ -1.85
RFC4-213ENST00000489028 CREB3O43889 395 aa3.51□□□□□ -1.85
RFC4-213ENST00000489028 JRKO75564 520 aa3.51□□□□□ -1.85
RFC4-213ENST00000489028 WISP2O76076 250 aa3.51□□□□□ -1.85
RFC4-213ENST00000489028 AMBPP02760 352 aa3.51□□□□□ -1.85
RFC4-213ENST00000489028 ICAM1P05362 532 aa3.51□□□□□ -1.85
RFC4-213ENST00000489028 ANOS1P23352 680 aa3.51□□□□□ -1.85
RFC4-213ENST00000489028 ELF1P32519 619 aa3.51□□□□□ -1.85
RFC4-213ENST00000489028 MAD2L1Q13257 205 aaPredicted RBP3.51□□□□□ -1.85
RFC4-213ENST00000489028 MRGPRG-AS1Q2M3A8 158 aa3.51□□□□□ -1.85
RFC4-213ENST00000489028 TMEM35AQ53FP2 167 aa3.51□□□□□ -1.85
RFC4-213ENST00000489028 SOWAHCQ53LP3 525 aaPredicted RBP3.51□□□□□ -1.85
RFC4-213ENST00000489028 ZNF805Q5CZA5 627 aa3.51□□□□□ -1.85
RFC4-213ENST00000489028 JAKMIP3Q5VZ66 844 aa3.51□□□□□ -1.85
RFC4-213ENST00000489028 NSUN5P2Q63ZY6 315 aa3.51□□□□□ -1.85
RFC4-213ENST00000489028 PLA2G4FQ68DD2 849 aa3.51□□□□□ -1.85
RFC4-213ENST00000489028 TTI2Q6NXR4 508 aa3.51□□□□□ -1.85
RFC4-213ENST00000489028 Q75L30 129 aa3.51□□□□□ -1.85
RFC4-213ENST00000489028 SDCCAG8Q86SQ7 713 aaPredicted RBP3.51□□□□□ -1.85
RFC4-213ENST00000489028 RBM15BQ8NDT2 890 aaKnown RBP3.51□□□□□ -1.85
RFC4-213ENST00000489028 THAP6Q8TBB0 222 aa3.51□□□□□ -1.85
RFC4-213ENST00000489028 ETNPPLQ8TBG4 499 aa3.51□□□□□ -1.85
RFC4-213ENST00000489028 ZNF501Q96CX3 271 aaPredicted RBP3.51□□□□□ -1.85
RFC4-213ENST00000489028 LINGO1Q96FE5 620 aa3.51□□□□□ -1.85
RFC4-213ENST00000489028 HARBI1Q96MB7 349 aa3.51□□□□□ -1.85
RFC4-213ENST00000489028 SMC6Q96SB8 1091 aa3.51□□□□□ -1.85
RFC4-213ENST00000489028 STK39Q9UEW8 545 aa3.51□□□□□ -1.85
RFC4-213ENST00000489028 LIMA1Q9UHB6 759 aaKnown RBP3.51□□□□□ -1.85
RFC4-213ENST00000489028 GAB2Q9UQC2 676 aa3.51□□□□□ -1.85
RFC4-213ENST00000489028 B4E171 279 aa3.5□□□□□ -1.85
RFC4-213ENST00000489028 TMEM178BH3BS89 294 aa3.5□□□□□ -1.85
RFC4-213ENST00000489028 J3KRW8 73 aa3.5□□□□□ -1.85
RFC4-213ENST00000489028 TMEM63AO94886 807 aa3.5□□□□□ -1.85
RFC4-213ENST00000489028 IPO7O95373 1038 aaKnown RBP3.5□□□□□ -1.85
RFC4-213ENST00000489028 CD4P01730 458 aa3.5□□□□□ -1.85
RFC4-213ENST00000489028 IGHV4-39P01824 125 aa3.5□□□□□ -1.85
RFC4-213ENST00000489028 TSPAN7P41732 249 aa3.5□□□□□ -1.85
RFC4-213ENST00000489028 CRIP2P52943 208 aaPredicted RBP3.5□□□□□ -1.85
RFC4-213ENST00000489028 MED22Q15528 200 aa3.5□□□□□ -1.85
RFC4-213ENST00000489028 PNLIPRP3Q17RR3 467 aa3.5□□□□□ -1.85
RFC4-213ENST00000489028 CPLX4Q7Z7G2 160 aa3.5□□□□□ -1.85
RFC4-213ENST00000489028 ADSSL1Q8N142 457 aa3.5□□□□□ -1.85
RFC4-213ENST00000489028 RASGEF1CQ8N431 466 aa3.5□□□□□ -1.85
RFC4-213ENST00000489028 METTL27Q8N6F8 245 aaPredicted RBP3.5□□□□□ -1.85
RFC4-213ENST00000489028 FRMD1Q8N878 549 aa3.5□□□□□ -1.85
RFC4-213ENST00000489028 KLHDC9Q8NEP7 349 aa3.5□□□□□ -1.85
RFC4-213ENST00000489028 OR1J2Q8NGS2 313 aa3.5□□□□□ -1.85
RFC4-213ENST00000489028 TDRD7Q8NHU6 1098 aaKnown RBP3.5□□□□□ -1.85
RFC4-213ENST00000489028 NEURL2Q9BR09 285 aa3.5□□□□□ -1.85
RFC4-213ENST00000489028 MTMR10Q9NXD2 777 aa3.5□□□□□ -1.85
RFC4-213ENST00000489028 FAF1Q9UNN5 650 aaPredicted RBP3.5□□□□□ -1.85
RFC4-213ENST00000489028 ARHGEF40Q8TER5 1519 aa3.49□□□□□ -1.85
RFC4-213ENST00000489028 OR5K3A6NET4 321 aa3.49□□□□□ -1.85
RFC4-213ENST00000489028 EIF4E1BA6NMX2 242 aaKnown RBP3.49□□□□□ -1.85
RFC4-213ENST00000489028 H3BQ06 376 aaPredicted RBP3.49□□□□□ -1.85
RFC4-213ENST00000489028 DVL1O14640 695 aa3.49□□□□□ -1.85
RFC4-213ENST00000489028 HCRTR2O43614 444 aa3.49□□□□□ -1.85
RFC4-213ENST00000489028 SLC25A12O75746 678 aa3.49□□□□□ -1.85
RFC4-213ENST00000489028 KRT9P35527 623 aa3.49□□□□□ -1.85
RFC4-213ENST00000489028 ARCN1P48444 511 aaKnown RBP3.49□□□□□ -1.85
RFC4-213ENST00000489028 AMPHP49418 695 aa3.49□□□□□ -1.85
RFC4-213ENST00000489028 DVL1P1P54792 670 aaPredicted RBP3.49□□□□□ -1.85
RFC4-213ENST00000489028 TAS2R40P59535 323 aa3.49□□□□□ -1.85
RFC4-213ENST00000489028 EEF1A1P68104 462 aaKnown RBP3.49□□□□□ -1.85
RFC4-213ENST00000489028 PLIN5Q00G26 463 aa3.49□□□□□ -1.85
RFC4-213ENST00000489028 MYLK3Q32MK0 819 aa3.49□□□□□ -1.85
RFC4-213ENST00000489028 RAB6CQ53S08 254 aa3.49□□□□□ -1.85
RFC4-213ENST00000489028 PDSS1Q5T2R2 415 aa3.49□□□□□ -1.85
RFC4-213ENST00000489028 EEF1A1P5Q5VTE0 462 aa3.49□□□□□ -1.85
RFC4-213ENST00000489028 PMS2CLQ68D20 193 aa3.49□□□□□ -1.85
RFC4-213ENST00000489028 ZNF704Q6ZNC4 412 aaPredicted RBP3.49□□□□□ -1.85
RFC4-213ENST00000489028 CLEC17AQ6ZS10 378 aa3.49□□□□□ -1.85
RFC4-213ENST00000489028 TMTC3Q6ZXV5 915 aa3.49□□□□□ -1.85
RFC4-213ENST00000489028 PXKQ7Z7A4 578 aa3.49□□□□□ -1.85
RFC4-213ENST00000489028 ARHGAP12Q8IWW6 846 aa3.49□□□□□ -1.85
RFC4-213ENST00000489028 HM13Q8TCT9 377 aa3.49□□□□□ -1.85
RFC4-213ENST00000489028 TMEM255BQ8WV15 326 aa3.49□□□□□ -1.85
RFC4-213ENST00000489028 ZKSCAN4Q969J2 545 aaPredicted RBP3.49□□□□□ -1.85
RFC4-213ENST00000489028 C7orf26Q96N11 449 aa3.49□□□□□ -1.85
RFC4-213ENST00000489028 RAB6CQ9H0N0 254 aa3.49□□□□□ -1.85
RFC4-213ENST00000489028 PDCL3Q9H2J4 239 aa3.49□□□□□ -1.85
RFC4-213ENST00000489028 FKRPQ9H9S5 495 aa3.49□□□□□ -1.85
RFC4-213ENST00000489028 SCRT2Q9NQ03 307 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms