RNA–Protein interactions for RNA: ENST00000488727.5

CCM2-216, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,719 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-216ENST00000488727 USH1CQ9Y6N9 552 aa19.28■□□□□ 0.68
CCM2-216ENST00000488727 GOLGA8CPA6NN73 597 aa19.27■□□□□ 0.68
CCM2-216ENST00000488727 CXorf49A8MYA2 514 aaPredicted RBP19.27■□□□□ 0.68
CCM2-216ENST00000488727 RHOBTB1O94844 696 aa19.27■□□□□ 0.68
CCM2-216ENST00000488727 ITPKAP23677 461 aa19.27■□□□□ 0.68
CCM2-216ENST00000488727 NBL1P41271 181 aa19.27■□□□□ 0.68
CCM2-216ENST00000488727 SERPINB9P50453 376 aa19.27■□□□□ 0.68
CCM2-216ENST00000488727 ARHGEF7Q14155 803 aa19.27■□□□□ 0.68
CCM2-216ENST00000488727 LYSMD4Q5XG99 296 aa19.27■□□□□ 0.68
CCM2-216ENST00000488727 HSD11B1LQ7Z5J1 315 aa19.27■□□□□ 0.68
CCM2-216ENST00000488727 LINC00523Q86TU6 105 aa19.27■□□□□ 0.68
CCM2-216ENST00000488727 CTAGE3PQ8IX95 158 aa19.27■□□□□ 0.68
CCM2-216ENST00000488727 CCDC63Q8NA47 563 aa19.27■□□□□ 0.68
CCM2-216ENST00000488727 ZNF398Q8TD17 642 aa19.27■□□□□ 0.68
CCM2-216ENST00000488727 BLOC1S5Q8TDH9 187 aa19.27■□□□□ 0.68
CCM2-216ENST00000488727 SLC17A9Q9BYT1 436 aa19.27■□□□□ 0.68
CCM2-216ENST00000488727 SLC17A7Q9P2U7 560 aa19.27■□□□□ 0.68
CCM2-216ENST00000488727 EIF2B4Q9UI10 523 aaKnown RBP19.27■□□□□ 0.68
CCM2-216ENST00000488727 A0A1W2PPC4 97 aa19.26■□□□□ 0.67
CCM2-216ENST00000488727 TRIM49D1C9J1S8 452 aa19.26■□□□□ 0.67
CCM2-216ENST00000488727 GOLGA8RI6L899 631 aa19.26■□□□□ 0.67
CCM2-216ENST00000488727 TM7SF2O76062 418 aa19.26■□□□□ 0.67
CCM2-216ENST00000488727 PAK4O96013 591 aaPredicted RBP19.26■□□□□ 0.67
CCM2-216ENST00000488727 C1SP09871 688 aa19.26■□□□□ 0.67
CCM2-216ENST00000488727 ZNF30P17039 623 aa19.26■□□□□ 0.67
CCM2-216ENST00000488727 TPH1P17752 444 aa19.26■□□□□ 0.67
CCM2-216ENST00000488727 HNRNPH1P31943 449 aaKnown RBP19.26■□□□□ 0.67
CCM2-216ENST00000488727 SKIV2L2P42285 1042 aaKnown RBP19.26■□□□□ 0.67
CCM2-216ENST00000488727 NAB1Q13506 487 aa19.26■□□□□ 0.67
CCM2-216ENST00000488727 MPP5Q8N3R9 675 aa19.26■□□□□ 0.67
CCM2-216ENST00000488727 FITM2Q8N6M3 262 aa19.26■□□□□ 0.67
CCM2-216ENST00000488727 SUMF1Q8NBK3 374 aa19.26■□□□□ 0.67
CCM2-216ENST00000488727 DNASE2BQ8WZ79 361 aa19.26■□□□□ 0.67
CCM2-216ENST00000488727 STAMBPL1Q96FJ0 436 aa19.26■□□□□ 0.67
CCM2-216ENST00000488727 COQ10AQ96MF6 247 aa19.26■□□□□ 0.67
CCM2-216ENST00000488727 KLF6Q99612 283 aaPredicted RBP19.26■□□□□ 0.67
CCM2-216ENST00000488727 NAT9Q9BTE0 207 aa19.26■□□□□ 0.67
CCM2-216ENST00000488727 SLCO1B3Q9NPD5 702 aa19.26■□□□□ 0.67
CCM2-216ENST00000488727 CASS4Q9NQ75 786 aa19.26■□□□□ 0.67
CCM2-216ENST00000488727 MOCS1Q9NZB8 636 aa19.26■□□□□ 0.67
CCM2-216ENST00000488727 RAD51BO15315 384 aa19.25■□□□□ 0.67
CCM2-216ENST00000488727 SLC31A1O15431 190 aa19.25■□□□□ 0.67
CCM2-216ENST00000488727 KRT38O76015 456 aa19.25■□□□□ 0.67
CCM2-216ENST00000488727 RECQL5O94762 991 aaPredicted RBP19.25■□□□□ 0.67
CCM2-216ENST00000488727 PYGBP11216 843 aa19.25■□□□□ 0.67
CCM2-216ENST00000488727 CNTFP26441 200 aa19.25■□□□□ 0.67
CCM2-216ENST00000488727 STC1P52823 247 aa19.25■□□□□ 0.67
CCM2-216ENST00000488727 NCALDP61601 193 aa19.25■□□□□ 0.67
CCM2-216ENST00000488727 CDH17Q12864 832 aa19.25■□□□□ 0.67
CCM2-216ENST00000488727 RFLNAQ6ZTI6 216 aa19.25■□□□□ 0.67
CCM2-216ENST00000488727 OTOAQ7RTW8 1153 aa19.25■□□□□ 0.67
CCM2-216ENST00000488727 TTC30BQ8N4P2 665 aa19.25■□□□□ 0.67
CCM2-216ENST00000488727 C1orf216Q8TAB5 229 aa19.25■□□□□ 0.67
CCM2-216ENST00000488727 C10orf82Q8WW14 230 aa19.25■□□□□ 0.67
CCM2-216ENST00000488727 ZFYVE1Q9HBF4 777 aa19.25■□□□□ 0.67
CCM2-216ENST00000488727 FZD3Q9NPG1 666 aa19.25■□□□□ 0.67
CCM2-216ENST00000488727 MAD1L1Q9Y6D9 718 aa19.25■□□□□ 0.67
CCM2-216ENST00000488727 FRYLO94915 3013 aa19.25■□□□□ 0.67
CCM2-216ENST00000488727 SDR42E2A6NKP2 422 aa19.25■□□□□ 0.67
CCM2-216ENST00000488727 PSMD11O00231 422 aa19.25■□□□□ 0.67
CCM2-216ENST00000488727 WNT9AO14904 365 aa19.25■□□□□ 0.67
CCM2-216ENST00000488727 LZTS3O60299 673 aaPredicted RBP19.25■□□□□ 0.67
CCM2-216ENST00000488727 SLC4A1P02730 911 aa19.25■□□□□ 0.67
CCM2-216ENST00000488727 CD27P26842 260 aa19.25■□□□□ 0.67
CCM2-216ENST00000488727 ETV3P41162 512 aa19.25■□□□□ 0.67
CCM2-216ENST00000488727 SGCGQ13326 291 aa19.25■□□□□ 0.67
CCM2-216ENST00000488727 ACOX1Q15067 660 aa19.25■□□□□ 0.67
CCM2-216ENST00000488727 SETMARQ53H47 684 aaPredicted RBP19.25■□□□□ 0.67
CCM2-216ENST00000488727 TIFABQ6ZNK6 161 aa19.25■□□□□ 0.67
CCM2-216ENST00000488727 Q6ZVL8 140 aa19.25■□□□□ 0.67
CCM2-216ENST00000488727 MARK2Q7KZI7 788 aaKnown RBP19.25■□□□□ 0.67
CCM2-216ENST00000488727 DNAAF3Q8N9W5 541 aa19.25■□□□□ 0.67
CCM2-216ENST00000488727 MYOCQ99972 504 aa19.25■□□□□ 0.67
CCM2-216ENST00000488727 TMEM74BQ9NUR3 256 aa19.25■□□□□ 0.67
CCM2-216ENST00000488727 GPR179Q6PRD1 2367 aa19.24■□□□□ 0.67
CCM2-216ENST00000488727 COPEO14579 308 aa19.24■□□□□ 0.67
CCM2-216ENST00000488727 CREB5Q02930 508 aa19.24■□□□□ 0.67
CCM2-216ENST00000488727 AGERQ15109 404 aa19.24■□□□□ 0.67
CCM2-216ENST00000488727 SPDYAQ5MJ70 313 aa19.24■□□□□ 0.67
CCM2-216ENST00000488727 WDR45BQ5MNZ6 344 aa19.24■□□□□ 0.67
CCM2-216ENST00000488727 CERCAMQ5T4B2 595 aa19.24■□□□□ 0.67
CCM2-216ENST00000488727 ZNF449Q6P9G9 518 aa19.24■□□□□ 0.67
CCM2-216ENST00000488727 TRMT10BQ6PF06 316 aaKnown RBP19.24■□□□□ 0.67
CCM2-216ENST00000488727 GLT6D1Q7Z4J2 308 aa19.24■□□□□ 0.67
CCM2-216ENST00000488727 TECPR1Q7Z6L1 1165 aa19.24■□□□□ 0.67
CCM2-216ENST00000488727 RGL4Q8IZJ4 473 aa19.24■□□□□ 0.67
CCM2-216ENST00000488727 ASB12Q8WXK4 309 aa19.24■□□□□ 0.67
CCM2-216ENST00000488727 SRPK1Q96SB4 655 aaKnown RBP19.24■□□□□ 0.67
CCM2-216ENST00000488727 GPR63Q9BZJ6 419 aa19.24■□□□□ 0.67
CCM2-216ENST00000488727 MIR1-1HGQ9H1L0 117 aa19.24■□□□□ 0.67
CCM2-216ENST00000488727 MANSC1Q9H8J5 431 aa19.24■□□□□ 0.67
CCM2-216ENST00000488727 KLC4Q9NSK0 619 aa19.24■□□□□ 0.67
CCM2-216ENST00000488727 HACD3Q9P035 362 aa19.24■□□□□ 0.67
CCM2-216ENST00000488727 CA5BQ9Y2D0 317 aa19.24■□□□□ 0.67
CCM2-216ENST00000488727 ARL5AQ9Y689 179 aa19.24■□□□□ 0.67
CCM2-216ENST00000488727 KLF11O14901 512 aa19.23■□□□□ 0.67
CCM2-216ENST00000488727 BUD23O43709 281 aaKnown RBP19.23■□□□□ 0.67
CCM2-216ENST00000488727 RFPL1O75677 317 aa19.23■□□□□ 0.67
CCM2-216ENST00000488727 DCTN3O75935 186 aa19.23■□□□□ 0.67
CCM2-216ENST00000488727 PGAM1P18669 254 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms