RNA–Protein interactions for RNA: ENST00000488454.5

SKA1-204, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 3 BASIC

Gene SKA1, Length 669 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-204ENST00000488454 ANKRD20A4Q4UJ75 823 aa10.22□□□□□ -0.77
SKA1-204ENST00000488454 TRIM61Q5EBN2 209 aa10.22□□□□□ -0.77
SKA1-204ENST00000488454 ZRANB3Q5FWF4 1079 aa10.22□□□□□ -0.77
SKA1-204ENST00000488454 AFTPHQ6ULP2 937 aa10.22□□□□□ -0.77
SKA1-204ENST00000488454 CES3Q6UWW8 571 aa10.22□□□□□ -0.77
SKA1-204ENST00000488454 ZDHHC24Q6UX98 284 aa10.22□□□□□ -0.77
SKA1-204ENST00000488454 GCNT7Q6ZNI0 430 aa10.22□□□□□ -0.77
SKA1-204ENST00000488454 TAS2R42Q7RTR8 314 aa10.22□□□□□ -0.77
SKA1-204ENST00000488454 HEATR4Q86WZ0 1026 aa10.22□□□□□ -0.77
SKA1-204ENST00000488454 PHYKPLQ8IUZ5 450 aa10.22□□□□□ -0.77
SKA1-204ENST00000488454 ANKMY2Q8IV38 441 aa10.22□□□□□ -0.77
SKA1-204ENST00000488454 ZBED8Q8IZ13 594 aa10.22□□□□□ -0.77
SKA1-204ENST00000488454 OTUD6BQ8N6M0 293 aa10.22□□□□□ -0.77
SKA1-204ENST00000488454 PLA2G15Q8NCC3 412 aa10.22□□□□□ -0.77
SKA1-204ENST00000488454 C1orf216Q8TAB5 229 aa10.22□□□□□ -0.77
SKA1-204ENST00000488454 GDAP1Q8TB36 358 aa10.22□□□□□ -0.77
SKA1-204ENST00000488454 BTN2A2Q8WVV5 523 aa10.22□□□□□ -0.77
SKA1-204ENST00000488454 GLYATL1Q969I3 302 aa10.22□□□□□ -0.77
SKA1-204ENST00000488454 ZNF669Q96BR6 464 aaPredicted RBP10.22□□□□□ -0.77
SKA1-204ENST00000488454 ULK4Q96C45 1275 aa10.22□□□□□ -0.77
SKA1-204ENST00000488454 MFSD3Q96ES6 412 aa10.22□□□□□ -0.77
SKA1-204ENST00000488454 HIC2Q96JB3 615 aa10.22□□□□□ -0.77
SKA1-204ENST00000488454 ZNF778Q96MU6 729 aa10.22□□□□□ -0.77
SKA1-204ENST00000488454 TTC25Q96NG3 672 aa10.22□□□□□ -0.77
SKA1-204ENST00000488454 AGAP2Q99490 1192 aa10.22□□□□□ -0.77
SKA1-204ENST00000488454 FMO2Q99518 471 aa10.22□□□□□ -0.77
SKA1-204ENST00000488454 TEX101Q9BY14 249 aa10.22□□□□□ -0.77
SKA1-204ENST00000488454 SUDS3Q9H7L9 328 aaPredicted RBP10.22□□□□□ -0.77
SKA1-204ENST00000488454 UGT1A7Q9HAW7 530 aa10.22□□□□□ -0.77
SKA1-204ENST00000488454 UGT1A10Q9HAW8 530 aa10.22□□□□□ -0.77
SKA1-204ENST00000488454 UGT1A8Q9HAW9 530 aa10.22□□□□□ -0.77
SKA1-204ENST00000488454 SAYSD1Q9NPB0 183 aa10.22□□□□□ -0.77
SKA1-204ENST00000488454 SLC2A6Q9UGQ3 507 aa10.22□□□□□ -0.77
SKA1-204ENST00000488454 ZC3H7BQ9UGR2 993 aaKnown RBP10.22□□□□□ -0.77
SKA1-204ENST00000488454 CRLS1Q9UJA2 301 aa10.22□□□□□ -0.77
SKA1-204ENST00000488454 CDV3Q9UKY7 258 aaKnown RBP10.22□□□□□ -0.77
SKA1-204ENST00000488454 ANKRD6Q9Y2G4 727 aa10.22□□□□□ -0.77
SKA1-204ENST00000488454 NUMA1Q14980 2115 aa10.22□□□□□ -0.77
SKA1-204ENST00000488454 ANKRD36A6QL64 1941 aa10.21□□□□□ -0.77
SKA1-204ENST00000488454 ABCA7Q8IZY2 2146 aa10.21□□□□□ -0.77
SKA1-204ENST00000488454 A0A1B0GVT2 93 aa10.21□□□□□ -0.77
SKA1-204ENST00000488454 CCDC162PA2VCL2 907 aa10.21□□□□□ -0.77
SKA1-204ENST00000488454 K7ESM1 405 aa10.21□□□□□ -0.77
SKA1-204ENST00000488454 PFDN6O15212 129 aa10.21□□□□□ -0.77
SKA1-204ENST00000488454 TP73O15350 636 aa10.21□□□□□ -0.77
SKA1-204ENST00000488454 VAPBO95292 243 aa10.21□□□□□ -0.77
SKA1-204ENST00000488454 GOT2P00505 430 aaKnown RBP10.21□□□□□ -0.77
SKA1-204ENST00000488454 RALBP11234 206 aa10.21□□□□□ -0.77
SKA1-204ENST00000488454 MYCLP1P12525 358 aaPredicted RBP10.21□□□□□ -0.77
SKA1-204ENST00000488454 MCM3P25205 808 aa10.21□□□□□ -0.77
SKA1-204ENST00000488454 PSMA3P25788 255 aa10.21□□□□□ -0.77
SKA1-204ENST00000488454 PMLP29590 882 aa10.21□□□□□ -0.77
SKA1-204ENST00000488454 CARSP49589 748 aaKnown RBP10.21□□□□□ -0.77
SKA1-204ENST00000488454 ATXN3P54252 364 aaPredicted RBP10.21□□□□□ -0.77
SKA1-204ENST00000488454 CDK3Q00526 305 aa10.21□□□□□ -0.77
SKA1-204ENST00000488454 ACVR1Q04771 509 aa10.21□□□□□ -0.77
SKA1-204ENST00000488454 CACNG1Q06432 222 aa10.21□□□□□ -0.77
SKA1-204ENST00000488454 NFATC2Q13469 925 aa10.21□□□□□ -0.77
SKA1-204ENST00000488454 NFATC4Q14934 902 aa10.21□□□□□ -0.77
SKA1-204ENST00000488454 LONRF1Q17RB8 773 aa10.21□□□□□ -0.77
SKA1-204ENST00000488454 ATP13A5Q4VNC0 1218 aa10.21□□□□□ -0.77
SKA1-204ENST00000488454 FASTKD1Q53R41 847 aaKnown RBP10.21□□□□□ -0.77
SKA1-204ENST00000488454 AARS2Q5JTZ9 985 aaKnown RBP10.21□□□□□ -0.77
SKA1-204ENST00000488454 SPANXN3Q5MJ09 141 aa10.21□□□□□ -0.77
SKA1-204ENST00000488454 LDLRAP1Q5SW96 308 aa10.21□□□□□ -0.77
SKA1-204ENST00000488454 LYPLAL1Q5VWZ2 237 aa10.21□□□□□ -0.77
SKA1-204ENST00000488454 PEAR1Q5VY43 1037 aaPredicted RBP10.21□□□□□ -0.77
SKA1-204ENST00000488454 SLC23A3Q6PIS1 610 aa10.21□□□□□ -0.77
SKA1-204ENST00000488454 IL27RAQ6UWB1 636 aa10.21□□□□□ -0.77
SKA1-204ENST00000488454 ENPP7Q6UWV6 458 aa10.21□□□□□ -0.77
SKA1-204ENST00000488454 SNX20Q7Z614 316 aa10.21□□□□□ -0.77
SKA1-204ENST00000488454 SDCCAG8Q86SQ7 713 aaPredicted RBP10.21□□□□□ -0.77
SKA1-204ENST00000488454 TMEM135Q86UB9 458 aa10.21□□□□□ -0.77
SKA1-204ENST00000488454 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.21□□□□□ -0.77
SKA1-204ENST00000488454 FBXO36Q8NEA4 188 aa10.21□□□□□ -0.77
SKA1-204ENST00000488454 OR13H1Q8NG92 308 aa10.21□□□□□ -0.77
SKA1-204ENST00000488454 OR13J1Q8NGT2 312 aa10.21□□□□□ -0.77
SKA1-204ENST00000488454 OR4L1Q8NH43 312 aa10.21□□□□□ -0.77
SKA1-204ENST00000488454 HEXDCQ8WVB3 486 aa10.21□□□□□ -0.77
SKA1-204ENST00000488454 RUBCNQ92622 972 aa10.21□□□□□ -0.77
SKA1-204ENST00000488454 FUBP1Q96AE4 644 aaKnown RBP10.21□□□□□ -0.77
SKA1-204ENST00000488454 CFAP36Q96G28 342 aa10.21□□□□□ -0.77
SKA1-204ENST00000488454 DCUN1D1Q96GG9 259 aa10.21□□□□□ -0.77
SKA1-204ENST00000488454 VPS35Q96QK1 796 aa10.21□□□□□ -0.77
SKA1-204ENST00000488454 ZDHHC5Q9C0B5 715 aa10.21□□□□□ -0.77
SKA1-204ENST00000488454 PHACTR1Q9C0D0 580 aa10.21□□□□□ -0.77
SKA1-204ENST00000488454 FAM96AQ9H5X1 160 aa10.21□□□□□ -0.77
SKA1-204ENST00000488454 PPANQ9NQ55 473 aaKnown RBP10.21□□□□□ -0.77
SKA1-204ENST00000488454 TREX1Q9NSU2 369 aa10.21□□□□□ -0.77
SKA1-204ENST00000488454 C20orf96Q9NUD7 363 aaPredicted RBP10.21□□□□□ -0.77
SKA1-204ENST00000488454 ZDHHC18Q9NUE0 388 aa10.21□□□□□ -0.77
SKA1-204ENST00000488454 MOSPD1Q9UJG1 213 aa10.21□□□□□ -0.77
SKA1-204ENST00000488454 NFU1Q9UMS0 254 aa10.21□□□□□ -0.77
SKA1-204ENST00000488454 CHMP2BQ9UQN3 213 aa10.21□□□□□ -0.77
SKA1-204ENST00000488454 TEX264Q9Y6I9 313 aa10.21□□□□□ -0.77
SKA1-204ENST00000488454 SLCO1B1Q9Y6L6 691 aa10.21□□□□□ -0.77
SKA1-204ENST00000488454 FAM169AQ9Y6X4 670 aa10.21□□□□□ -0.77
SKA1-204ENST00000488454 FADS2P1A8MWK0 482 aa10.2□□□□□ -0.78
SKA1-204ENST00000488454 E7ESA3 106 aa10.2□□□□□ -0.78
SKA1-204ENST00000488454 PROB1E7EW31 1015 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms