RNA–Protein interactions for RNA: ENST00000488035.5

R3HDM1-219, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-219ENST00000488035 KCNT1Q5JUK3 1230 aa2.84□□□□□ -1.95
R3HDM1-219ENST00000488035 PLEKHS1Q5SXH7 462 aa2.84□□□□□ -1.95
R3HDM1-219ENST00000488035 KCTD18Q6PI47 426 aaPredicted RBP2.84□□□□□ -1.95
R3HDM1-219ENST00000488035 RAD9BQ6WBX8 426 aa2.84□□□□□ -1.95
R3HDM1-219ENST00000488035 BRINP3Q76B58 766 aa2.84□□□□□ -1.95
R3HDM1-219ENST00000488035 CACNA2D4Q7Z3S7 1137 aa2.84□□□□□ -1.95
R3HDM1-219ENST00000488035 KBTBD6Q86V97 674 aa2.84□□□□□ -1.95
R3HDM1-219ENST00000488035 TICAM1Q8IUC6 712 aa2.84□□□□□ -1.95
R3HDM1-219ENST00000488035 ODF3L1Q8IXM7 274 aa2.84□□□□□ -1.95
R3HDM1-219ENST00000488035 RPAP2Q8IXW5 612 aaPredicted RBP2.84□□□□□ -1.95
R3HDM1-219ENST00000488035 SCYL3Q8IZE3 742 aa2.84□□□□□ -1.95
R3HDM1-219ENST00000488035 NME8Q8N427 588 aa2.84□□□□□ -1.95
R3HDM1-219ENST00000488035 RASGEF1CQ8N431 466 aa2.84□□□□□ -1.95
R3HDM1-219ENST00000488035 CSNK2A3Q8NEV1 391 aa2.84□□□□□ -1.95
R3HDM1-219ENST00000488035 OR1J2Q8NGS2 313 aa2.84□□□□□ -1.95
R3HDM1-219ENST00000488035 OR5R1Q8NH85 324 aa2.84□□□□□ -1.95
R3HDM1-219ENST00000488035 HM13Q8TCT9 377 aa2.84□□□□□ -1.95
R3HDM1-219ENST00000488035 ELP5Q8TE02 316 aa2.84□□□□□ -1.95
R3HDM1-219ENST00000488035 TRPC4APQ8TEL6 797 aa2.84□□□□□ -1.95
R3HDM1-219ENST00000488035 WFIKKN2Q8TEU8 576 aa2.84□□□□□ -1.95
R3HDM1-219ENST00000488035 FAM216AQ8WUB2 273 aa2.84□□□□□ -1.95
R3HDM1-219ENST00000488035 SLC44A1Q8WWI5 657 aa2.84□□□□□ -1.95
R3HDM1-219ENST00000488035 CALML4Q96GE6 196 aa2.84□□□□□ -1.95
R3HDM1-219ENST00000488035 C3orf30Q96M34 536 aa2.84□□□□□ -1.95
R3HDM1-219ENST00000488035 HARBI1Q96MB7 349 aa2.84□□□□□ -1.95
R3HDM1-219ENST00000488035 PAFAH2Q99487 392 aa2.84□□□□□ -1.95
R3HDM1-219ENST00000488035 NTPCRQ9BSD7 190 aaKnown RBP2.84□□□□□ -1.95
R3HDM1-219ENST00000488035 MAK16Q9BXY0 300 aaKnown RBP2.84□□□□□ -1.95
R3HDM1-219ENST00000488035 CCDC68Q9H2F9 335 aa2.84□□□□□ -1.95
R3HDM1-219ENST00000488035 GAREM1Q9H706 876 aa2.84□□□□□ -1.95
R3HDM1-219ENST00000488035 PLSCR4Q9NRQ2 329 aa2.84□□□□□ -1.95
R3HDM1-219ENST00000488035 ANKEF1Q9NU02 776 aa2.84□□□□□ -1.95
R3HDM1-219ENST00000488035 RPS6KA6Q9UK32 745 aa2.84□□□□□ -1.95
R3HDM1-219ENST00000488035 FBXW11Q9UKB1 542 aa2.84□□□□□ -1.95
R3HDM1-219ENST00000488035 ACSL5Q9ULC5 683 aa2.84□□□□□ -1.95
R3HDM1-219ENST00000488035 B3GALT5Q9Y2C3 310 aa2.84□□□□□ -1.95
R3HDM1-219ENST00000488035 CMAHPQ9Y471 501 aa2.84□□□□□ -1.95
R3HDM1-219ENST00000488035 A8MV72 311 aaPredicted RBP2.83□□□□□ -1.96
R3HDM1-219ENST00000488035 B4DLN1 442 aa2.83□□□□□ -1.96
R3HDM1-219ENST00000488035 ZNF587BE7ETH6 402 aa2.83□□□□□ -1.96
R3HDM1-219ENST00000488035 ADAMDEC1O15204 470 aa2.83□□□□□ -1.96
R3HDM1-219ENST00000488035 ADAM20O43506 726 aa2.83□□□□□ -1.96
R3HDM1-219ENST00000488035 ERAL1O75616 437 aaKnown RBP2.83□□□□□ -1.96
R3HDM1-219ENST00000488035 ZBTB11O95625 1053 aaPredicted RBP2.83□□□□□ -1.96
R3HDM1-219ENST00000488035 PPP1R3DO95685 299 aa2.83□□□□□ -1.96
R3HDM1-219ENST00000488035 PRSS2P07478 247 aa2.83□□□□□ -1.96
R3HDM1-219ENST00000488035 LINC00271P0C7V0 271 aa2.83□□□□□ -1.96
R3HDM1-219ENST00000488035 MMP9P14780 707 aa2.83□□□□□ -1.96
R3HDM1-219ENST00000488035 DDX5P17844 614 aaKnown RBP2.83□□□□□ -1.96
R3HDM1-219ENST00000488035 S1PR1P21453 382 aa2.83□□□□□ -1.96
R3HDM1-219ENST00000488035 HOXA13P31271 388 aaPredicted RBP2.83□□□□□ -1.96
R3HDM1-219ENST00000488035 EIF2DP41214 584 aaKnown RBP2.83□□□□□ -1.96
R3HDM1-219ENST00000488035 PRCPP42785 496 aa2.83□□□□□ -1.96
R3HDM1-219ENST00000488035 MSH2P43246 934 aa2.83□□□□□ -1.96
R3HDM1-219ENST00000488035 NRIP1P48552 1158 aa2.83□□□□□ -1.96
R3HDM1-219ENST00000488035 MRPL12P52815 198 aaKnown RBP2.83□□□□□ -1.96
R3HDM1-219ENST00000488035 RAD23BP54727 409 aa2.83□□□□□ -1.96
R3HDM1-219ENST00000488035 GAS1P54826 345 aa2.83□□□□□ -1.96
R3HDM1-219ENST00000488035 TAS2R38P59533 333 aa2.83□□□□□ -1.96
R3HDM1-219ENST00000488035 IFI35P80217 286 aaPredicted RBP2.83□□□□□ -1.96
R3HDM1-219ENST00000488035 ZBED6P86452 979 aa2.83□□□□□ -1.96
R3HDM1-219ENST00000488035 LTBQ06643 244 aa2.83□□□□□ -1.96
R3HDM1-219ENST00000488035 DSC1Q08554 894 aa2.83□□□□□ -1.96
R3HDM1-219ENST00000488035 SREBF2Q12772 1141 aa2.83□□□□□ -1.96
R3HDM1-219ENST00000488035 EPS8Q12929 822 aa2.83□□□□□ -1.96
R3HDM1-219ENST00000488035 GRIK2Q13002 908 aa2.83□□□□□ -1.96
R3HDM1-219ENST00000488035 STK4Q13043 487 aa2.83□□□□□ -1.96
R3HDM1-219ENST00000488035 AIMP2Q13155 320 aaKnown RBP2.83□□□□□ -1.96
R3HDM1-219ENST00000488035 BECN1Q14457 450 aa2.83□□□□□ -1.96
R3HDM1-219ENST00000488035 PCLAFQ15004 111 aa2.83□□□□□ -1.96
R3HDM1-219ENST00000488035 DECR1Q16698 335 aa2.83□□□□□ -1.96
R3HDM1-219ENST00000488035 MYLK3Q32MK0 819 aa2.83□□□□□ -1.96
R3HDM1-219ENST00000488035 EFHC1Q5JVL4 640 aa2.83□□□□□ -1.96
R3HDM1-219ENST00000488035 RARS2Q5T160 578 aaKnown RBP2.83□□□□□ -1.96
R3HDM1-219ENST00000488035 OTUD3Q5T2D3 398 aaPredicted RBP2.83□□□□□ -1.96
R3HDM1-219ENST00000488035 FRG2Q64ET8 278 aa2.83□□□□□ -1.96
R3HDM1-219ENST00000488035 LCN10Q6JVE6 187 aa2.83□□□□□ -1.96
R3HDM1-219ENST00000488035 RGMBQ6NW40 437 aa2.83□□□□□ -1.96
R3HDM1-219ENST00000488035 LIN28BQ6ZN17 250 aaKnown RBP eCLIP2.83□□□□□ -1.967e-11■■■■■ 33.9
R3HDM1-219ENST00000488035 GALNT5Q7Z7M9 940 aa2.83□□□□□ -1.96
R3HDM1-219ENST00000488035 SATL1Q86VE3 508 aa2.83□□□□□ -1.96
R3HDM1-219ENST00000488035 TEX11Q8IYF3 940 aa2.83□□□□□ -1.96
R3HDM1-219ENST00000488035 IQCF1Q8N6M8 205 aa2.83□□□□□ -1.96
R3HDM1-219ENST00000488035 POC5Q8NA72 575 aa2.83□□□□□ -1.96
R3HDM1-219ENST00000488035 SLC20A1Q8WUM9 679 aa2.83□□□□□ -1.96
R3HDM1-219ENST00000488035 TANKQ92844 425 aa2.83□□□□□ -1.96
R3HDM1-219ENST00000488035 SLC22A18Q96BI1 424 aa2.83□□□□□ -1.96
R3HDM1-219ENST00000488035 SAT2Q96F10 170 aaPredicted RBP2.83□□□□□ -1.96
R3HDM1-219ENST00000488035 ABHD1Q96SE0 405 aa2.83□□□□□ -1.96
R3HDM1-219ENST00000488035 GFI1Q99684 422 aa2.83□□□□□ -1.96
R3HDM1-219ENST00000488035 SH3GL2Q99962 352 aa2.83□□□□□ -1.96
R3HDM1-219ENST00000488035 NUDT16L1Q9BRJ7 211 aaKnown RBP2.83□□□□□ -1.96
R3HDM1-219ENST00000488035 CSTL1Q9H114 145 aa2.83□□□□□ -1.96
R3HDM1-219ENST00000488035 HRH4Q9H3N8 390 aa2.83□□□□□ -1.96
R3HDM1-219ENST00000488035 LRRC4Q9HBW1 653 aa2.83□□□□□ -1.96
R3HDM1-219ENST00000488035 EPB41L5Q9HCM4 733 aa2.83□□□□□ -1.96
R3HDM1-219ENST00000488035 STK39Q9UEW8 545 aa2.83□□□□□ -1.96
R3HDM1-219ENST00000488035 SEC63Q9UGP8 760 aaKnown RBP2.83□□□□□ -1.96
R3HDM1-219ENST00000488035 PDS5AQ29RF7 1337 aaKnown RBP2.83□□□□□ -1.96
R3HDM1-219ENST00000488035 ATXN2Q99700 1313 aaKnown RBP2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms