RNA–Protein interactions for RNA: ENST00000486741.5

HMGN1-216, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 4,299 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-216ENST00000486741 MAGEE2Q8TD90 523 aaPredicted RBP13.15□□□□□ -0.3
HMGN1-216ENST00000486741 IMP4Q96G21 291 aaKnown RBP13.15□□□□□ -0.3
HMGN1-216ENST00000486741 IL12RB2Q99665 862 aa13.15□□□□□ -0.3
HMGN1-216ENST00000486741 OLFM1Q99784 485 aa13.15□□□□□ -0.3
HMGN1-216ENST00000486741 MYOCQ99972 504 aa13.15□□□□□ -0.3
HMGN1-216ENST00000486741 TCF25Q9BQ70 676 aa13.15□□□□□ -0.3
HMGN1-216ENST00000486741 DHRS4Q9BTZ2 278 aa13.15□□□□□ -0.3
HMGN1-216ENST00000486741 MFSD1Q9H3U5 465 aa13.15□□□□□ -0.3
HMGN1-216ENST00000486741 K7ERQ8 282 aa13.15□□□□□ -0.3
HMGN1-216ENST00000486741 ADAM12O43184 909 aa13.15□□□□□ -0.3
HMGN1-216ENST00000486741 PRAMEF11O60813 436 aa13.15□□□□□ -0.3
HMGN1-216ENST00000486741 DNAJA2O60884 412 aa13.15□□□□□ -0.3
HMGN1-216ENST00000486741 XYLBO75191 536 aa13.15□□□□□ -0.3
HMGN1-216ENST00000486741 CAPN1P07384 714 aa13.15□□□□□ -0.3
HMGN1-216ENST00000486741 PPM1AP35813 382 aa13.15□□□□□ -0.3
HMGN1-216ENST00000486741 WASP42768 502 aa13.15□□□□□ -0.3
HMGN1-216ENST00000486741 ZFP1Q6P2D0 407 aa13.15□□□□□ -0.3
HMGN1-216ENST00000486741 RD3Q7Z3Z2 195 aa13.15□□□□□ -0.3
HMGN1-216ENST00000486741 UMODL1-AS1Q8N2C9 162 aa13.15□□□□□ -0.3
HMGN1-216ENST00000486741 VPS37AQ8NEZ2 397 aa13.15□□□□□ -0.3
HMGN1-216ENST00000486741 MAPK15Q8TD08 544 aa13.15□□□□□ -0.3
HMGN1-216ENST00000486741 ARIH1Q9Y4X5 557 aaPredicted RBP13.15□□□□□ -0.3
HMGN1-216ENST00000486741 RGS14O43566 566 aa13.14□□□□□ -0.31
HMGN1-216ENST00000486741 WDR47O94967 919 aa13.14□□□□□ -0.31
HMGN1-216ENST00000486741 ERAP2Q6P179 960 aa13.14□□□□□ -0.31
HMGN1-216ENST00000486741 ARHGAP12Q8IWW6 846 aa13.14□□□□□ -0.31
HMGN1-216ENST00000486741 PYCR2Q96C36 320 aa13.14□□□□□ -0.31
HMGN1-216ENST00000486741 GRIP2Q9C0E4 1043 aa13.14□□□□□ -0.31
HMGN1-216ENST00000486741 EBF2Q9HAK2 575 aa13.14□□□□□ -0.31
HMGN1-216ENST00000486741 SLC13A4Q9UKG4 626 aa13.14□□□□□ -0.31
HMGN1-216ENST00000486741 PTGDR2Q9Y5Y4 395 aa13.14□□□□□ -0.31
HMGN1-216ENST00000486741 SCN1AP35498 2009 aa13.14□□□□□ -0.31
HMGN1-216ENST00000486741 BHMG1C9JSJ3 638 aaPredicted RBP13.14□□□□□ -0.31
HMGN1-216ENST00000486741 STK25O00506 426 aa13.14□□□□□ -0.31
HMGN1-216ENST00000486741 CLDN7O95471 211 aa13.14□□□□□ -0.31
HMGN1-216ENST00000486741 CYP11A1P05108 521 aa13.14□□□□□ -0.31
HMGN1-216ENST00000486741 CCL5P13501 91 aa13.14□□□□□ -0.31
HMGN1-216ENST00000486741 S100A3P33764 101 aa13.14□□□□□ -0.31
HMGN1-216ENST00000486741 GDF5P43026 501 aa13.14□□□□□ -0.31
HMGN1-216ENST00000486741 ACTR3P61158 418 aa13.14□□□□□ -0.31
HMGN1-216ENST00000486741 LCP2Q13094 533 aa13.14□□□□□ -0.31
HMGN1-216ENST00000486741 MAPKAPK3Q16644 382 aa13.14□□□□□ -0.31
HMGN1-216ENST00000486741 MPPE1Q53F39 396 aa13.14□□□□□ -0.31
HMGN1-216ENST00000486741 PAWRQ96IZ0 340 aaKnown RBP13.14□□□□□ -0.31
HMGN1-216ENST00000486741 TMEM247A6NEH6 219 aa13.14□□□□□ -0.31
HMGN1-216ENST00000486741 TBC1D4O60343 1298 aa13.14□□□□□ -0.31
HMGN1-216ENST00000486741 SLC22A3O75751 556 aa13.14□□□□□ -0.31
HMGN1-216ENST00000486741 FAM58BPP0C7Q3 252 aa13.14□□□□□ -0.31
HMGN1-216ENST00000486741 PRIM2P49643 509 aa13.14□□□□□ -0.31
HMGN1-216ENST00000486741 FOLH1Q04609 750 aa13.14□□□□□ -0.31
HMGN1-216ENST00000486741 PDK3Q15120 406 aa13.14□□□□□ -0.31
HMGN1-216ENST00000486741 SERPINA13PQ6UXR4 307 aa13.14□□□□□ -0.31
HMGN1-216ENST00000486741 C11orf74Q86VG3 221 aa13.14□□□□□ -0.31
HMGN1-216ENST00000486741 C2CD4AQ8NCU7 369 aaPredicted RBP13.14□□□□□ -0.31
HMGN1-216ENST00000486741 ZNF555Q8NEP9 628 aa13.14□□□□□ -0.31
HMGN1-216ENST00000486741 EEF1AKMT1Q8WVE0 214 aa13.14□□□□□ -0.31
HMGN1-216ENST00000486741 IGSF21Q96ID5 467 aa13.14□□□□□ -0.31
HMGN1-216ENST00000486741 NSUN5Q96P11 429 aaKnown RBP13.14□□□□□ -0.31
HMGN1-216ENST00000486741 RTP3Q9BQQ7 232 aa13.14□□□□□ -0.31
HMGN1-216ENST00000486741 TRIM8Q9BZR9 551 aa13.14□□□□□ -0.31
HMGN1-216ENST00000486741 TLE6Q9H808 572 aa13.14□□□□□ -0.31
HMGN1-216ENST00000486741 PRPF19Q9UMS4 504 aaKnown RBP13.14□□□□□ -0.31
HMGN1-216ENST00000486741 RPL26L1Q9UNX3 145 aaKnown RBP13.14□□□□□ -0.31
HMGN1-216ENST00000486741 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.13□□□□□ -0.31
HMGN1-216ENST00000486741 MATN2O00339 956 aa13.13□□□□□ -0.31
HMGN1-216ENST00000486741 INPPL1O15357 1258 aa13.13□□□□□ -0.31
HMGN1-216ENST00000486741 LDLRP01130 860 aa13.13□□□□□ -0.31
HMGN1-216ENST00000486741 ETS2P15036 469 aa13.13□□□□□ -0.31
HMGN1-216ENST00000486741 ALDH9A1P49189 494 aa13.13□□□□□ -0.31
HMGN1-216ENST00000486741 TAF1AQ15573 450 aaPredicted RBP13.13□□□□□ -0.31
HMGN1-216ENST00000486741 WLSQ5T9L3 541 aa13.13□□□□□ -0.31
HMGN1-216ENST00000486741 ARMC3Q5W041 872 aa13.13□□□□□ -0.31
HMGN1-216ENST00000486741 EPGNQ6UW88 154 aa13.13□□□□□ -0.31
HMGN1-216ENST00000486741 NUDT18Q6ZVK8 323 aa13.13□□□□□ -0.31
HMGN1-216ENST00000486741 TAGAPQ8N103 731 aa13.13□□□□□ -0.31
HMGN1-216ENST00000486741 KLHDC9Q8NEP7 349 aa13.13□□□□□ -0.31
HMGN1-216ENST00000486741 B4GALNT2Q8NHY0 566 aa13.13□□□□□ -0.31
HMGN1-216ENST00000486741 SH3RF2Q8TEC5 729 aa13.13□□□□□ -0.31
HMGN1-216ENST00000486741 PLD4Q96BZ4 506 aa13.13□□□□□ -0.31
HMGN1-216ENST00000486741 CCDC28BQ9BUN5 200 aa13.13□□□□□ -0.31
HMGN1-216ENST00000486741 WRAP53Q9BUR4 548 aaKnown RBP13.13□□□□□ -0.31
HMGN1-216ENST00000486741 INVSQ9Y283 1065 aa13.13□□□□□ -0.31
HMGN1-216ENST00000486741 ILVBLA1L0T0 632 aa13.13□□□□□ -0.31
HMGN1-216ENST00000486741 ECI2O75521 394 aa13.13□□□□□ -0.31
HMGN1-216ENST00000486741 ALDH1A2O94788 518 aa13.13□□□□□ -0.31
HMGN1-216ENST00000486741 CSF2RAP15509 400 aa13.13□□□□□ -0.31
HMGN1-216ENST00000486741 NCK1P16333 377 aa13.13□□□□□ -0.31
HMGN1-216ENST00000486741 EFNA1P20827 205 aaPredicted RBP13.13□□□□□ -0.31
HMGN1-216ENST00000486741 HNF4AP41235 474 aa13.13□□□□□ -0.31
HMGN1-216ENST00000486741 MAGEA11P43364 429 aa13.13□□□□□ -0.31
HMGN1-216ENST00000486741 CAMK2GQ13555 558 aaPredicted RBP13.13□□□□□ -0.31
HMGN1-216ENST00000486741 IL23RQ5VWK5 629 aa13.13□□□□□ -0.31
HMGN1-216ENST00000486741 UBE2R2Q712K3 238 aaPredicted RBP13.13□□□□□ -0.31
HMGN1-216ENST00000486741 HORMAD1Q86X24 394 aa13.13□□□□□ -0.31
HMGN1-216ENST00000486741 ITFG1Q8TB96 612 aa13.13□□□□□ -0.31
HMGN1-216ENST00000486741 TTC36A6NLP5 189 aa13.13□□□□□ -0.31
HMGN1-216ENST00000486741 CLOCKO15516 846 aa13.13□□□□□ -0.31
HMGN1-216ENST00000486741 OTCP00480 354 aa13.13□□□□□ -0.31
HMGN1-216ENST00000486741 DHRS4L1P0CG22 281 aa13.13□□□□□ -0.31
HMGN1-216ENST00000486741 AGTR2P50052 363 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms