RNA–Protein interactions for RNA: ENST00000481135.1

CUL3-209, Transcript of cullin 3, humanhuman

TSL 3

Gene CUL3, Length 754 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-209ENST00000481135 TMEM204Q9BSN7 226 aa8.66□□□□□ -1.02
CUL3-209ENST00000481135 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.66□□□□□ -1.02
CUL3-209ENST00000481135 PAG1Q9NWQ8 432 aa8.66□□□□□ -1.02
CUL3-209ENST00000481135 FBXL2Q9UKC9 423 aa8.66□□□□□ -1.02
CUL3-209ENST00000481135 SH2B2O14492 632 aaPredicted RBP8.65□□□□□ -1.02
CUL3-209ENST00000481135 KCNN4O15554 427 aa8.65□□□□□ -1.02
CUL3-209ENST00000481135 PAPSS1O43252 624 aaPredicted RBP8.65□□□□□ -1.02
CUL3-209ENST00000481135 TUBBP07437 444 aa8.65□□□□□ -1.02
CUL3-209ENST00000481135 MMP9P14780 707 aa8.65□□□□□ -1.02
CUL3-209ENST00000481135 PSMC6P62333 389 aa8.65□□□□□ -1.02
CUL3-209ENST00000481135 BMP2KLQ5H9B9 411 aa8.65□□□□□ -1.02
CUL3-209ENST00000481135 GARNL3Q5VVW2 1013 aa8.65□□□□□ -1.02
CUL3-209ENST00000481135 PGBD5Q8N414 524 aa8.65□□□□□ -1.02
CUL3-209ENST00000481135 SYT2Q8N9I0 419 aaPredicted RBP8.65□□□□□ -1.02
CUL3-209ENST00000481135 AVL9Q8NBF6 648 aa8.65□□□□□ -1.02
CUL3-209ENST00000481135 CEP295NLQ96MC4 621 aa8.65□□□□□ -1.02
CUL3-209ENST00000481135 DACH2Q96NX9 599 aa8.65□□□□□ -1.02
CUL3-209ENST00000481135 MTERF1Q99551 399 aaKnown RBP8.65□□□□□ -1.02
CUL3-209ENST00000481135 CENPOQ9BU64 300 aa8.65□□□□□ -1.02
CUL3-209ENST00000481135 DNAJC18Q9H819 358 aa8.65□□□□□ -1.02
CUL3-209ENST00000481135 MARCH4Q9P2E8 410 aaPredicted RBP8.65□□□□□ -1.02
CUL3-209ENST00000481135 DNAJB4Q9UDY4 337 aa8.65□□□□□ -1.02
CUL3-209ENST00000481135 PPIEQ9UNP9 301 aaKnown RBP8.65□□□□□ -1.02
CUL3-209ENST00000481135 SEC23IPQ9Y6Y8 1000 aaKnown RBP8.65□□□□□ -1.02
CUL3-209ENST00000481135 TCERG1O14776 1098 aaKnown RBP8.64□□□□□ -1.03
CUL3-209ENST00000481135 CSPG5O95196 566 aa8.64□□□□□ -1.03
CUL3-209ENST00000481135 GH2P01242 217 aa8.64□□□□□ -1.03
CUL3-209ENST00000481135 MMP14P50281 582 aa8.64□□□□□ -1.03
CUL3-209ENST00000481135 ARSEP51690 589 aa8.64□□□□□ -1.03
CUL3-209ENST00000481135 BNC1Q01954 994 aa8.64□□□□□ -1.03
CUL3-209ENST00000481135 PRPF4BQ13523 1007 aaKnown RBP8.64□□□□□ -1.03
CUL3-209ENST00000481135 NSUN5P2Q63ZY6 315 aa8.64□□□□□ -1.03
CUL3-209ENST00000481135 PAPD4Q6PIY7 484 aaKnown RBP8.64□□□□□ -1.03
CUL3-209ENST00000481135 GLCCI1Q86VQ1 547 aa8.64□□□□□ -1.03
CUL3-209ENST00000481135 GSDMBQ8TAX9 411 aa8.64□□□□□ -1.03
CUL3-209ENST00000481135 THAP6Q8TBB0 222 aa8.64□□□□□ -1.03
CUL3-209ENST00000481135 TMED6Q8WW62 240 aa8.64□□□□□ -1.03
CUL3-209ENST00000481135 C3orf30Q96M34 536 aa8.64□□□□□ -1.03
CUL3-209ENST00000481135 FIZ1Q96SL8 496 aa8.64□□□□□ -1.03
CUL3-209ENST00000481135 PAFAH2Q99487 392 aa8.64□□□□□ -1.03
CUL3-209ENST00000481135 CMKLR1Q99788 373 aa8.64□□□□□ -1.03
CUL3-209ENST00000481135 SEMA3CQ99985 751 aa8.64□□□□□ -1.03
CUL3-209ENST00000481135 APOL6Q9BWW8 343 aa8.64□□□□□ -1.03
CUL3-209ENST00000481135 WSB2Q9NYS7 404 aaPredicted RBP8.64□□□□□ -1.03
CUL3-209ENST00000481135 IGLV5-37A0A075B6J1 123 aa8.63□□□□□ -1.03
CUL3-209ENST00000481135 UGT1A1P22309 533 aa8.63□□□□□ -1.03
CUL3-209ENST00000481135 APOBEC1P41238 236 aaKnown RBP8.63□□□□□ -1.03
CUL3-209ENST00000481135 CDKN2AP42771 156 aaKnown RBP8.63□□□□□ -1.03
CUL3-209ENST00000481135 PDE1BQ01064 536 aa8.63□□□□□ -1.03
CUL3-209ENST00000481135 TRAF3Q13114 568 aa8.63□□□□□ -1.03
CUL3-209ENST00000481135 BAATQ14032 418 aaPredicted RBP8.63□□□□□ -1.03
CUL3-209ENST00000481135 ZNF280DQ6N043 979 aa8.63□□□□□ -1.03
CUL3-209ENST00000481135 BRAT1Q6PJG6 821 aa8.63□□□□□ -1.03
CUL3-209ENST00000481135 TPRG1Q6ZUI0 275 aa8.63□□□□□ -1.03
CUL3-209ENST00000481135 LINC00346Q8IVM7 164 aa8.63□□□□□ -1.03
CUL3-209ENST00000481135 ADHFE1Q8IWW8 467 aa8.63□□□□□ -1.03
CUL3-209ENST00000481135 EMC1Q8N766 993 aa8.63□□□□□ -1.03
CUL3-209ENST00000481135 POMGNT2Q8NAT1 580 aa8.63□□□□□ -1.03
CUL3-209ENST00000481135 OR2AK2Q8NG84 335 aa8.63□□□□□ -1.03
CUL3-209ENST00000481135 B4GALNT2Q8NHY0 566 aa8.63□□□□□ -1.03
CUL3-209ENST00000481135 CAMK1GQ96NX5 476 aa8.63□□□□□ -1.03
CUL3-209ENST00000481135 QRFPRQ96P65 431 aa8.63□□□□□ -1.03
CUL3-209ENST00000481135 CSF3RQ99062 836 aa8.63□□□□□ -1.03
CUL3-209ENST00000481135 KRTAP4-2Q9BYR5 136 aa8.63□□□□□ -1.03
CUL3-209ENST00000481135 RTN4RQ9BZR6 473 aa8.63□□□□□ -1.03
CUL3-209ENST00000481135 SMARCAL1Q9NZC9 954 aa8.63□□□□□ -1.03
CUL3-209ENST00000481135 PLAGL1Q9UM63 463 aa8.63□□□□□ -1.03
CUL3-209ENST00000481135 MAGED1Q9Y5V3 778 aaPredicted RBP8.63□□□□□ -1.03
CUL3-209ENST00000481135 A0A1W2PR77 199 aa8.62□□□□□ -1.03
CUL3-209ENST00000481135 TPOP07202 933 aa8.62□□□□□ -1.03
CUL3-209ENST00000481135 ACAA1P09110 424 aaPredicted RBP8.62□□□□□ -1.03
CUL3-209ENST00000481135 FCGR1AP12314 374 aa8.62□□□□□ -1.03
CUL3-209ENST00000481135 IL11P20809 199 aa8.62□□□□□ -1.03
CUL3-209ENST00000481135 SEC61A1P61619 476 aaKnown RBP8.62□□□□□ -1.03
CUL3-209ENST00000481135 MYBPHQ13203 477 aa8.62□□□□□ -1.03
CUL3-209ENST00000481135 TNFAIP1Q13829 316 aa8.62□□□□□ -1.03
CUL3-209ENST00000481135 KRT33BQ14525 404 aa8.62□□□□□ -1.03
CUL3-209ENST00000481135 C18orf63Q68DL7 685 aa8.62□□□□□ -1.03
CUL3-209ENST00000481135 LCN10Q6JVE6 187 aa8.62□□□□□ -1.03
CUL3-209ENST00000481135 SLC30A6Q6NXT4 461 aa8.62□□□□□ -1.03
CUL3-209ENST00000481135 NRROSQ86YC3 692 aa8.62□□□□□ -1.03
CUL3-209ENST00000481135 TANKQ92844 425 aa8.62□□□□□ -1.03
CUL3-209ENST00000481135 KLHL20Q9Y2M5 609 aa8.62□□□□□ -1.03
CUL3-209ENST00000481135 AMDHD2Q9Y303 409 aa8.62□□□□□ -1.03
CUL3-209ENST00000481135 LNP1A1A4G5 178 aa8.61□□□□□ -1.03
CUL3-209ENST00000481135 A6NL46 340 aa8.61□□□□□ -1.03
CUL3-209ENST00000481135 ANKRD28O15084 1053 aa8.61□□□□□ -1.03
CUL3-209ENST00000481135 CLDN14O95500 239 aa8.61□□□□□ -1.03
CUL3-209ENST00000481135 ITGB8P26012 769 aa8.61□□□□□ -1.03
CUL3-209ENST00000481135 LIG4P49917 911 aa8.61□□□□□ -1.03
CUL3-209ENST00000481135 LINC00205P59089 165 aa8.61□□□□□ -1.03
CUL3-209ENST00000481135 TMF1P82094 1093 aa8.61□□□□□ -1.03
CUL3-209ENST00000481135 CXCL9Q07325 125 aa8.61□□□□□ -1.03
CUL3-209ENST00000481135 IGSF11Q5DX21 431 aa8.61□□□□□ -1.03
CUL3-209ENST00000481135 RHBDF2Q6PJF5 856 aa8.61□□□□□ -1.03
CUL3-209ENST00000481135 MINDY1Q8N5J2 469 aa8.61□□□□□ -1.03
CUL3-209ENST00000481135 RHBDF1Q96CC6 855 aa8.61□□□□□ -1.03
CUL3-209ENST00000481135 SCMH1Q96GD3 660 aa8.61□□□□□ -1.03
CUL3-209ENST00000481135 GCNAQ96QF7 691 aa8.61□□□□□ -1.03
CUL3-209ENST00000481135 TXLNGYQ9BZA5 131 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms