RNA–Protein interactions for RNA: ENST00000480658.5

CCM2-213, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,136 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-213ENST00000480658 F3P13726 295 aa11.34□□□□□ -0.59
CCM2-213ENST00000480658 TNNT1P13805 278 aa11.34□□□□□ -0.59
CCM2-213ENST00000480658 PTPN3P26045 913 aa11.34□□□□□ -0.59
CCM2-213ENST00000480658 AK4P27144 223 aaPredicted RBP11.34□□□□□ -0.59
CCM2-213ENST00000480658 CSTF2P33240 577 aaKnown RBP eCLIP11.34□□□□□ -0.59
CCM2-213ENST00000480658 CTNNA1P35221 906 aaKnown RBP11.34□□□□□ -0.59
CCM2-213ENST00000480658 LIMK2P53671 638 aa11.34□□□□□ -0.59
CCM2-213ENST00000480658 NAP1L1P55209 391 aaKnown RBP11.34□□□□□ -0.59
CCM2-213ENST00000480658 B4GALNT1Q00973 533 aa11.34□□□□□ -0.59
CCM2-213ENST00000480658 HHEXQ03014 270 aa11.34□□□□□ -0.59
CCM2-213ENST00000480658 PRPSAP1Q14558 356 aa11.34□□□□□ -0.59
CCM2-213ENST00000480658 PCSK7Q16549 785 aa11.34□□□□□ -0.59
CCM2-213ENST00000480658 CHST15Q7LFX5 561 aaPredicted RBP11.34□□□□□ -0.59
CCM2-213ENST00000480658 TMC3Q7Z5M5 1100 aa11.34□□□□□ -0.59
CCM2-213ENST00000480658 LRRTM4Q86VH4 590 aa11.34□□□□□ -0.59
CCM2-213ENST00000480658 CDKL3Q8IVW4 592 aaPredicted RBP11.34□□□□□ -0.59
CCM2-213ENST00000480658 NAGSQ8N159 534 aa11.34□□□□□ -0.59
CCM2-213ENST00000480658 PELI3Q8N2H9 469 aa11.34□□□□□ -0.59
CCM2-213ENST00000480658 CCL4L1Q8NHW4 92 aa11.34□□□□□ -0.59
CCM2-213ENST00000480658 HTR3CQ8WXA8 447 aa11.34□□□□□ -0.59
CCM2-213ENST00000480658 GLYATL1Q969I3 302 aa11.34□□□□□ -0.59
CCM2-213ENST00000480658 PRR11Q96HE9 360 aaPredicted RBP11.34□□□□□ -0.59
CCM2-213ENST00000480658 ZNF514Q96K75 400 aaPredicted RBP11.34□□□□□ -0.59
CCM2-213ENST00000480658 TTC25Q96NG3 672 aa11.34□□□□□ -0.59
CCM2-213ENST00000480658 QKIQ96PU8 341 aaKnown RBP eCLIP11.34□□□□□ -0.59
CCM2-213ENST00000480658 FCRL5Q96RD9 977 aa11.34□□□□□ -0.59
CCM2-213ENST00000480658 CCNL2Q96S94 520 aaPredicted RBP11.34□□□□□ -0.59
CCM2-213ENST00000480658 ZPBPQ9BS86 351 aa11.34□□□□□ -0.59
CCM2-213ENST00000480658 DDA1Q9BW61 102 aa11.34□□□□□ -0.59
CCM2-213ENST00000480658 FOXP3Q9BZS1 431 aa11.34□□□□□ -0.59
CCM2-213ENST00000480658 SUDS3Q9H7L9 328 aaPredicted RBP11.34□□□□□ -0.59
CCM2-213ENST00000480658 UCK1Q9HA47 277 aa11.34□□□□□ -0.59
CCM2-213ENST00000480658 PISDQ9UG56 409 aa11.34□□□□□ -0.59
CCM2-213ENST00000480658 FEZ2Q9UHY8 353 aaPredicted RBP11.34□□□□□ -0.59
CCM2-213ENST00000480658 SSUH2Q9Y2M2 353 aa11.34□□□□□ -0.59
CCM2-213ENST00000480658 AAR2Q9Y312 384 aaKnown RBP11.34□□□□□ -0.59
CCM2-213ENST00000480658 PKP3Q9Y446 797 aa11.34□□□□□ -0.59
CCM2-213ENST00000480658 IGHV1OR21-1A0A087WYE8 117 aa11.33□□□□□ -0.6
CCM2-213ENST00000480658 NDUFA10O95299 355 aa11.33□□□□□ -0.6
CCM2-213ENST00000480658 SLC5A2P31639 672 aa11.33□□□□□ -0.6
CCM2-213ENST00000480658 POLD2P49005 469 aa11.33□□□□□ -0.6
CCM2-213ENST00000480658 PPM1FP49593 454 aaPredicted RBP11.33□□□□□ -0.6
CCM2-213ENST00000480658 ATP1A2P50993 1020 aa11.33□□□□□ -0.6
CCM2-213ENST00000480658 MAZP56270 477 aaKnown RBP11.33□□□□□ -0.6
CCM2-213ENST00000480658 RWDD2BP57060 319 aa11.33□□□□□ -0.6
CCM2-213ENST00000480658 C19orf57Q0VDD7 668 aa11.33□□□□□ -0.6
CCM2-213ENST00000480658 AMZ1Q400G9 498 aa11.33□□□□□ -0.6
CCM2-213ENST00000480658 SOWAHCQ53LP3 525 aaPredicted RBP11.33□□□□□ -0.6
CCM2-213ENST00000480658 LDLRAP1Q5SW96 308 aa11.33□□□□□ -0.6
CCM2-213ENST00000480658 KAZNQ674X7 775 aa11.33□□□□□ -0.6
CCM2-213ENST00000480658 KCTD16Q68DU8 428 aa11.33□□□□□ -0.6
CCM2-213ENST00000480658 TMEM71Q6P5X7 295 aa11.33□□□□□ -0.6
CCM2-213ENST00000480658 BBS12Q6ZW61 710 aa11.33□□□□□ -0.6
CCM2-213ENST00000480658 MARK2Q7KZI7 788 aaKnown RBP11.33□□□□□ -0.6
CCM2-213ENST00000480658 B3GNT8Q7Z7M8 397 aa11.33□□□□□ -0.6
CCM2-213ENST00000480658 PLXDC1Q8IUK5 500 aa11.33□□□□□ -0.6
CCM2-213ENST00000480658 UBL4BQ8N7F7 174 aa11.33□□□□□ -0.6
CCM2-213ENST00000480658 TTC13Q8NBP0 860 aa11.33□□□□□ -0.6
CCM2-213ENST00000480658 POT1Q9NUX5 634 aa11.33□□□□□ -0.6
CCM2-213ENST00000480658 TMEM98Q9Y2Y6 226 aa11.33□□□□□ -0.6
CCM2-213ENST00000480658 PCDHGA3Q9Y5H0 932 aa11.33□□□□□ -0.6
CCM2-213ENST00000480658 EPN1Q9Y6I3 576 aaPredicted RBP11.33□□□□□ -0.6
CCM2-213ENST00000480658 CELSR3Q9NYQ7 3312 aa11.32□□□□□ -0.6
CCM2-213ENST00000480658 GOLGA4Q13439 2230 aaKnown RBP11.32□□□□□ -0.6
CCM2-213ENST00000480658 LOC285095A0A1B0GVY8 99 aa11.32□□□□□ -0.6
CCM2-213ENST00000480658 LILRA5A6NI73 299 aa11.32□□□□□ -0.6
CCM2-213ENST00000480658 C2orf81A6NN90 581 aa11.32□□□□□ -0.6
CCM2-213ENST00000480658 FADS2P1A8MWK0 482 aa11.32□□□□□ -0.6
CCM2-213ENST00000480658 MIF4GDA9UHW6 222 aaKnown RBP11.32□□□□□ -0.6
CCM2-213ENST00000480658 K7ENP7 123 aa11.32□□□□□ -0.6
CCM2-213ENST00000480658 CHUKO15111 745 aa11.32□□□□□ -0.6
CCM2-213ENST00000480658 TOX3O15405 576 aaPredicted RBP11.32□□□□□ -0.6
CCM2-213ENST00000480658 ATP1A1P05023 1023 aaKnown RBP11.32□□□□□ -0.6
CCM2-213ENST00000480658 ITGB2P05107 769 aa11.32□□□□□ -0.6
CCM2-213ENST00000480658 THRAP10827 490 aa11.32□□□□□ -0.6
CCM2-213ENST00000480658 SFTPCP11686 197 aa11.32□□□□□ -0.6
CCM2-213ENST00000480658 FECHP22830 423 aa11.32□□□□□ -0.6
CCM2-213ENST00000480658 CD1CP29017 333 aa11.32□□□□□ -0.6
CCM2-213ENST00000480658 SPAM1P38567 509 aa11.32□□□□□ -0.6
CCM2-213ENST00000480658 HALP42357 657 aa11.32□□□□□ -0.6
CCM2-213ENST00000480658 GEMP55040 296 aa11.32□□□□□ -0.6
CCM2-213ENST00000480658 OR1D5P58170 312 aa11.32□□□□□ -0.6
CCM2-213ENST00000480658 INSCQ1MX18 579 aa11.32□□□□□ -0.6
CCM2-213ENST00000480658 TAF1BQ53T94 588 aaPredicted RBP11.32□□□□□ -0.6
CCM2-213ENST00000480658 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.32□□□□□ -0.6
CCM2-213ENST00000480658 KLHL35Q6PF15 583 aa11.32□□□□□ -0.6
CCM2-213ENST00000480658 IYDQ6PHW0 289 aa11.32□□□□□ -0.6
CCM2-213ENST00000480658 INO80CQ6PI98 192 aaPredicted RBP11.32□□□□□ -0.6
CCM2-213ENST00000480658 PID1Q7Z2X4 250 aa11.32□□□□□ -0.6
CCM2-213ENST00000480658 GLT6D1Q7Z4J2 308 aa11.32□□□□□ -0.6
CCM2-213ENST00000480658 CPNE8Q86YQ8 564 aa11.32□□□□□ -0.6
CCM2-213ENST00000480658 TRIM48Q8IWZ4 208 aa11.32□□□□□ -0.6
CCM2-213ENST00000480658 BEND7Q8N7W2 519 aaPredicted RBP11.32□□□□□ -0.6
CCM2-213ENST00000480658 SLC37A2Q8TED4 501 aa11.32□□□□□ -0.6
CCM2-213ENST00000480658 HEXDCQ8WVB3 486 aa11.32□□□□□ -0.6
CCM2-213ENST00000480658 SLC39A7Q92504 469 aa11.32□□□□□ -0.6
CCM2-213ENST00000480658 NAF1Q96HR8 494 aaKnown RBP11.32□□□□□ -0.6
CCM2-213ENST00000480658 TAAR9Q96RI9 348 aa11.32□□□□□ -0.6
CCM2-213ENST00000480658 EFHD1Q9BUP0 239 aa11.32□□□□□ -0.6
CCM2-213ENST00000480658 GBA3Q9H227 469 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms