RNA–Protein interactions for RNA: ENST00000479532.1

SF3B1-209, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 587 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-209ENST00000479532 PI15O43692 258 aa6.22□□□□□ -1.41
SF3B1-209ENST00000479532 ZNF217O75362 1048 aa6.22□□□□□ -1.41
SF3B1-209ENST00000479532 PAPSS2O95340 614 aaPredicted RBP6.22□□□□□ -1.41
SF3B1-209ENST00000479532 POP4O95707 220 aaKnown RBP6.22□□□□□ -1.41
SF3B1-209ENST00000479532 MT-CO1P00395 513 aa6.22□□□□□ -1.41
SF3B1-209ENST00000479532 IL1BP01584 269 aa6.22□□□□□ -1.41
SF3B1-209ENST00000479532 THBDP07204 575 aa6.22□□□□□ -1.41
SF3B1-209ENST00000479532 C1QTNF9P0C862 333 aa6.22□□□□□ -1.41
SF3B1-209ENST00000479532 GOLGA6DP0CG33 693 aa6.22□□□□□ -1.41
SF3B1-209ENST00000479532 RBP3P10745 1247 aa6.22□□□□□ -1.41
SF3B1-209ENST00000479532 HLA-EP13747 358 aa6.22□□□□□ -1.41
SF3B1-209ENST00000479532 CCNB1P14635 433 aa6.22□□□□□ -1.41
SF3B1-209ENST00000479532 NFKBIAP25963 317 aa6.22□□□□□ -1.41
SF3B1-209ENST00000479532 TPP2P29144 1249 aaPredicted RBP6.22□□□□□ -1.41
SF3B1-209ENST00000479532 SERPINA4P29622 427 aa6.22□□□□□ -1.41
SF3B1-209ENST00000479532 GCKP35557 465 aa6.22□□□□□ -1.41
SF3B1-209ENST00000479532 ZBTB16Q05516 673 aa6.22□□□□□ -1.41
SF3B1-209ENST00000479532 NSUN2Q08J23 767 aaKnown RBP eCLIP6.22□□□□□ -1.41
SF3B1-209ENST00000479532 SLC10A2Q12908 348 aaPredicted RBP6.22□□□□□ -1.41
SF3B1-209ENST00000479532 KLF1Q13351 362 aaPredicted RBP6.22□□□□□ -1.41
SF3B1-209ENST00000479532 RIPK1Q13546 671 aa6.22□□□□□ -1.41
SF3B1-209ENST00000479532 PRPSAP1Q14558 356 aa6.22□□□□□ -1.41
SF3B1-209ENST00000479532 SNCBQ16143 134 aa6.22□□□□□ -1.41
SF3B1-209ENST00000479532 RALGPS1Q5JS13 557 aa6.22□□□□□ -1.41
SF3B1-209ENST00000479532 CEP85LQ5SZL2 805 aa6.22□□□□□ -1.41
SF3B1-209ENST00000479532 PAPD7Q5XG87 772 aaKnown RBP6.22□□□□□ -1.41
SF3B1-209ENST00000479532 ITPRIPL1Q6GPH6 555 aa6.22□□□□□ -1.41
SF3B1-209ENST00000479532 DENND5AQ6IQ26 1287 aa6.22□□□□□ -1.41
SF3B1-209ENST00000479532 AADACL2Q6P093 401 aa6.22□□□□□ -1.41
SF3B1-209ENST00000479532 KIAA1324Q6UXG2 1013 aaKnown RBP6.22□□□□□ -1.41
SF3B1-209ENST00000479532 ARHGAP36Q6ZRI8 547 aa6.22□□□□□ -1.41
SF3B1-209ENST00000479532 GSTA5Q7RTV2 222 aa6.22□□□□□ -1.41
SF3B1-209ENST00000479532 TRIM74Q86UV6 250 aa6.22□□□□□ -1.41
SF3B1-209ENST00000479532 TRIM73Q86UV7 250 aa6.22□□□□□ -1.41
SF3B1-209ENST00000479532 C11orf74Q86VG3 221 aa6.22□□□□□ -1.41
SF3B1-209ENST00000479532 THNSL2Q86YJ6 484 aa6.22□□□□□ -1.41
SF3B1-209ENST00000479532 PLD6Q8N2A8 252 aaKnown RBP6.22□□□□□ -1.41
SF3B1-209ENST00000479532 RASGEF1CQ8N431 466 aa6.22□□□□□ -1.41
SF3B1-209ENST00000479532 ZNF366Q8N895 744 aa6.22□□□□□ -1.41
SF3B1-209ENST00000479532 TMEM105Q8N8V8 129 aa6.22□□□□□ -1.41
SF3B1-209ENST00000479532 NETO2Q8NC67 525 aa6.22□□□□□ -1.41
SF3B1-209ENST00000479532 ACTL9Q8TC94 416 aa6.22□□□□□ -1.41
SF3B1-209ENST00000479532 ACTRT1Q8TDG2 376 aa6.22□□□□□ -1.41
SF3B1-209ENST00000479532 GANCQ8TET4 914 aa6.22□□□□□ -1.41
SF3B1-209ENST00000479532 GRK7Q8WTQ7 553 aa6.22□□□□□ -1.41
SF3B1-209ENST00000479532 FRS2Q8WU20 508 aa6.22□□□□□ -1.41
SF3B1-209ENST00000479532 HMGB4Q8WW32 186 aa6.22□□□□□ -1.41
SF3B1-209ENST00000479532 HTR3CQ8WXA8 447 aa6.22□□□□□ -1.41
SF3B1-209ENST00000479532 MAML1Q92585 1016 aa6.22□□□□□ -1.41
SF3B1-209ENST00000479532 PTPRN2Q92932 1015 aa6.22□□□□□ -1.41
SF3B1-209ENST00000479532 SIPA1Q96FS4 1042 aa6.22□□□□□ -1.41
SF3B1-209ENST00000479532 LRIG1Q96JA1 1093 aa6.22□□□□□ -1.41
SF3B1-209ENST00000479532 RUNDC3BQ96NL0 473 aa6.22□□□□□ -1.41
SF3B1-209ENST00000479532 FCRL3Q96P31 734 aaPredicted RBP6.22□□□□□ -1.41
SF3B1-209ENST00000479532 OLFM3Q96PB7 478 aa6.22□□□□□ -1.41
SF3B1-209ENST00000479532 QKIQ96PU8 341 aaKnown RBP eCLIP6.22□□□□□ -1.41
SF3B1-209ENST00000479532 PSKH2Q96QS6 385 aa6.22□□□□□ -1.41
SF3B1-209ENST00000479532 WDR24Q96S15 920 aa6.22□□□□□ -1.41
SF3B1-209ENST00000479532 ACOX2Q99424 681 aa6.22□□□□□ -1.41
SF3B1-209ENST00000479532 LGMNQ99538 433 aa6.22□□□□□ -1.41
SF3B1-209ENST00000479532 HEPHQ9BQS7 1158 aa6.22□□□□□ -1.41
SF3B1-209ENST00000479532 SLC12A9Q9BXP2 914 aa6.22□□□□□ -1.41
SF3B1-209ENST00000479532 FAM126AQ9BYI3 521 aaPredicted RBP6.22□□□□□ -1.41
SF3B1-209ENST00000479532 TM6SF2Q9BZW4 377 aa6.22□□□□□ -1.41
SF3B1-209ENST00000479532 IRF2BPLQ9H1B7 796 aa6.22□□□□□ -1.41
SF3B1-209ENST00000479532 ZDHHC6Q9H6R6 413 aa6.22□□□□□ -1.41
SF3B1-209ENST00000479532 ATP13A3Q9H7F0 1226 aa6.22□□□□□ -1.41
SF3B1-209ENST00000479532 TRIM39Q9HCM9 518 aa6.22□□□□□ -1.41
SF3B1-209ENST00000479532 NT5MQ9NPB1 228 aa6.22□□□□□ -1.41
SF3B1-209ENST00000479532 ZDHHC4Q9NPG8 344 aa6.22□□□□□ -1.41
SF3B1-209ENST00000479532 RBM22Q9NW64 420 aaKnown RBP eCLIP6.22□□□□□ -1.41
SF3B1-209ENST00000479532 GOLGA6AQ9NYA3 693 aa6.22□□□□□ -1.41
SF3B1-209ENST00000479532 DLGAP2Q9P1A6 1054 aa6.22□□□□□ -1.41
SF3B1-209ENST00000479532 KLHL8Q9P2G9 620 aaPredicted RBP6.22□□□□□ -1.41
SF3B1-209ENST00000479532 HECAQ9UBI9 543 aaPredicted RBP6.22□□□□□ -1.41
SF3B1-209ENST00000479532 SLCO3A1Q9UIG8 710 aa6.22□□□□□ -1.41
SF3B1-209ENST00000479532 FBXO4Q9UKT5 387 aa6.22□□□□□ -1.41
SF3B1-209ENST00000479532 TRHDEQ9UKU6 1024 aa6.22□□□□□ -1.41
SF3B1-209ENST00000479532 GMEB1Q9Y692 573 aa6.22□□□□□ -1.41
SF3B1-209ENST00000479532 MYO18AQ92614 2054 aaKnown RBP6.21□□□□□ -1.41
SF3B1-209ENST00000479532 F5P12259 2224 aa6.21□□□□□ -1.42
SF3B1-209ENST00000479532 A0A1W2PQF6 199 aa6.21□□□□□ -1.42
SF3B1-209ENST00000479532 BCLAF3A2AJT9 711 aaKnown RBP6.21□□□□□ -1.42
SF3B1-209ENST00000479532 WASH3PC4AMC7 463 aa6.21□□□□□ -1.42
SF3B1-209ENST00000479532 GOLGA8KD6RF30 607 aa6.21□□□□□ -1.42
SF3B1-209ENST00000479532 KRIT1O00522 736 aa6.21□□□□□ -1.42
SF3B1-209ENST00000479532 KCNN4O15554 427 aa6.21□□□□□ -1.42
SF3B1-209ENST00000479532 SMAD6O43541 496 aaKnown RBP6.21□□□□□ -1.42
SF3B1-209ENST00000479532 LIASO43766 372 aa6.21□□□□□ -1.42
SF3B1-209ENST00000479532 DNAJC8O75937 253 aaPredicted RBP6.21□□□□□ -1.42
SF3B1-209ENST00000479532 JCHAINP01591 159 aa6.21□□□□□ -1.42
SF3B1-209ENST00000479532 SYPP08247 313 aa6.21□□□□□ -1.42
SF3B1-209ENST00000479532 SERPINF2P08697 491 aa6.21□□□□□ -1.42
SF3B1-209ENST00000479532 VAV1P15498 845 aa6.21□□□□□ -1.42
SF3B1-209ENST00000479532 C5AR1P21730 350 aa6.21□□□□□ -1.42
SF3B1-209ENST00000479532 XPAP23025 273 aaPredicted RBP6.21□□□□□ -1.42
SF3B1-209ENST00000479532 OXTRP30559 389 aa6.21□□□□□ -1.42
SF3B1-209ENST00000479532 HOXA6P31267 233 aa6.21□□□□□ -1.42
SF3B1-209ENST00000479532 STIP1P31948 543 aaKnown RBP6.21□□□□□ -1.42
SF3B1-209ENST00000479532 CHRNA3P32297 505 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms