RNA–Protein interactions for RNA: ENST00000479525.6

ECHDC1-216, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,368 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-216ENST00000479525 DNAJC16Q9Y2G8 782 aa17.21■□□□□ 0.35
ECHDC1-216ENST00000479525 PPP1R12AO14974 1030 aaPredicted RBP17.2■□□□□ 0.34
ECHDC1-216ENST00000479525 BUD23O43709 281 aaKnown RBP17.2■□□□□ 0.34
ECHDC1-216ENST00000479525 CST8O60676 142 aa17.2■□□□□ 0.34
ECHDC1-216ENST00000479525 LIPCP11150 499 aa17.2■□□□□ 0.34
ECHDC1-216ENST00000479525 NFKB1P19838 968 aa17.2■□□□□ 0.34
ECHDC1-216ENST00000479525 CD68P34810 354 aaPredicted RBP17.2■□□□□ 0.34
ECHDC1-216ENST00000479525 ARHGAP25P42331 645 aa17.2■□□□□ 0.34
ECHDC1-216ENST00000479525 MLLT3P42568 568 aaPredicted RBP17.2■□□□□ 0.34
ECHDC1-216ENST00000479525 CDKN2BP42772 138 aa17.2■□□□□ 0.34
ECHDC1-216ENST00000479525 CHRNA4P43681 627 aa17.2■□□□□ 0.34
ECHDC1-216ENST00000479525 LIMK2P53671 638 aa17.2■□□□□ 0.34
ECHDC1-216ENST00000479525 RPL26P61254 145 aaKnown RBP17.2■□□□□ 0.34
ECHDC1-216ENST00000479525 RHDQ02161 417 aa17.2■□□□□ 0.34
ECHDC1-216ENST00000479525 HHEXQ03014 270 aa17.2■□□□□ 0.34
ECHDC1-216ENST00000479525 CDK18Q07002 472 aa17.2■□□□□ 0.34
ECHDC1-216ENST00000479525 TBX2Q13207 712 aaPredicted RBP17.2■□□□□ 0.34
ECHDC1-216ENST00000479525 PDK1Q15118 436 aa17.2■□□□□ 0.34
ECHDC1-216ENST00000479525 SKOR2Q2VWA4 1001 aaPredicted RBP17.2■□□□□ 0.34
ECHDC1-216ENST00000479525 SPOCD1Q6ZMY3 1216 aa17.2■□□□□ 0.34
ECHDC1-216ENST00000479525 EXTL1Q92935 676 aa17.2■□□□□ 0.34
ECHDC1-216ENST00000479525 ART4Q93070 314 aa17.2■□□□□ 0.34
ECHDC1-216ENST00000479525 AHCYL2Q96HN2 611 aaKnown RBP17.2■□□□□ 0.34
ECHDC1-216ENST00000479525 CTRCQ99895 268 aa17.2■□□□□ 0.34
ECHDC1-216ENST00000479525 ADGRE3Q9BY15 652 aa17.2■□□□□ 0.34
ECHDC1-216ENST00000479525 SLC25A51Q9H1U9 297 aa17.2■□□□□ 0.34
ECHDC1-216ENST00000479525 HAUS2Q9NVX0 235 aa17.2■□□□□ 0.34
ECHDC1-216ENST00000479525 SCHIP1Q9P0W5 487 aaPredicted RBP17.2■□□□□ 0.34
ECHDC1-216ENST00000479525 TRIM10Q9UDY6 481 aa17.2■□□□□ 0.34
ECHDC1-216ENST00000479525 SLC23A2Q9UGH3 650 aa17.2■□□□□ 0.34
ECHDC1-216ENST00000479525 DNPEPQ9ULA0 475 aa17.2■□□□□ 0.34
ECHDC1-216ENST00000479525 RPL26L1Q9UNX3 145 aaKnown RBP17.2■□□□□ 0.34
ECHDC1-216ENST00000479525 PIEZO2Q9H5I5 2752 aa17.2■□□□□ 0.34
ECHDC1-216ENST00000479525 CFAP46Q8IYW2 2715 aa17.19■□□□□ 0.34
ECHDC1-216ENST00000479525 NVLO15381 856 aaKnown RBP17.19■□□□□ 0.34
ECHDC1-216ENST00000479525 GRID2O43424 1007 aa17.19■□□□□ 0.34
ECHDC1-216ENST00000479525 SLC25A14O95258 325 aaPredicted RBP17.19■□□□□ 0.34
ECHDC1-216ENST00000479525 BPIP17213 487 aa17.19■□□□□ 0.34
ECHDC1-216ENST00000479525 CA5AP35218 305 aa17.19■□□□□ 0.34
ECHDC1-216ENST00000479525 MAGEA1P43355 309 aa17.19■□□□□ 0.34
ECHDC1-216ENST00000479525 ZNF569Q5MCW4 686 aa17.19■□□□□ 0.34
ECHDC1-216ENST00000479525 MANEAQ5SRI9 462 aa17.19■□□□□ 0.34
ECHDC1-216ENST00000479525 MICALCLQ6ZW33 695 aa17.19■□□□□ 0.34
ECHDC1-216ENST00000479525 ADGRG6Q86SQ4 1221 aa17.19■□□□□ 0.34
ECHDC1-216ENST00000479525 NLRP8Q86W28 1048 aa17.19■□□□□ 0.34
ECHDC1-216ENST00000479525 SFRP1Q8N474 314 aa17.19■□□□□ 0.34
ECHDC1-216ENST00000479525 TC2NQ8N9U0 490 aa17.19■□□□□ 0.34
ECHDC1-216ENST00000479525 NAT14Q8WUY8 206 aa17.19■□□□□ 0.34
ECHDC1-216ENST00000479525 NCSTNQ92542 709 aa17.19■□□□□ 0.34
ECHDC1-216ENST00000479525 KRT35Q92764 455 aa17.19■□□□□ 0.34
ECHDC1-216ENST00000479525 KLC4Q9NSK0 619 aa17.19■□□□□ 0.34
ECHDC1-216ENST00000479525 TMPRSS11EQ9UL52 423 aa17.19■□□□□ 0.34
ECHDC1-216ENST00000479525 B3GALT1Q9Y5Z6 326 aa17.19■□□□□ 0.34
ECHDC1-216ENST00000479525 ALG6Q9Y672 507 aa17.19■□□□□ 0.34
ECHDC1-216ENST00000479525 A0A0A6YYK5 440 aaPredicted RBP17.18■□□□□ 0.34
ECHDC1-216ENST00000479525 EFCAB7A8K855 629 aa17.18■□□□□ 0.34
ECHDC1-216ENST00000479525 TK2O00142 265 aa17.18■□□□□ 0.34
ECHDC1-216ENST00000479525 NUAK1O60285 661 aa17.18■□□□□ 0.34
ECHDC1-216ENST00000479525 PYGLP06737 847 aa17.18■□□□□ 0.34
ECHDC1-216ENST00000479525 THRAP10827 490 aa17.18■□□□□ 0.34
ECHDC1-216ENST00000479525 PLA2G2AP14555 144 aa17.18■□□□□ 0.34
ECHDC1-216ENST00000479525 GPR3P46089 330 aa17.18■□□□□ 0.34
ECHDC1-216ENST00000479525 WASHC5Q12768 1159 aa17.18■□□□□ 0.34
ECHDC1-216ENST00000479525 PRKD1Q15139 912 aaPredicted RBP17.18■□□□□ 0.34
ECHDC1-216ENST00000479525 TEX44Q53QW1 395 aa17.18■□□□□ 0.34
ECHDC1-216ENST00000479525 CHCHD2P9Q5T1J5 151 aaPredicted RBP17.18■□□□□ 0.34
ECHDC1-216ENST00000479525 CNGA4Q8IV77 575 aa17.18■□□□□ 0.34
ECHDC1-216ENST00000479525 CCDC50Q8IVM0 306 aa17.18■□□□□ 0.34
ECHDC1-216ENST00000479525 FAM118BQ9BPY3 351 aa17.18■□□□□ 0.34
ECHDC1-216ENST00000479525 HERPUD2Q9BSE4 406 aa17.18■□□□□ 0.34
ECHDC1-216ENST00000479525 HEMGNQ9BXL5 484 aa17.18■□□□□ 0.34
ECHDC1-216ENST00000479525 TRIM5Q9C035 493 aa17.18■□□□□ 0.34
ECHDC1-216ENST00000479525 APMAPQ9HDC9 416 aa17.18■□□□□ 0.34
ECHDC1-216ENST00000479525 DDX56Q9NY93 547 aaKnown RBP17.18■□□□□ 0.34
ECHDC1-216ENST00000479525 VPS18Q9P253 973 aa17.18■□□□□ 0.34
ECHDC1-216ENST00000479525 LCMT1Q9UIC8 334 aa17.18■□□□□ 0.34
ECHDC1-216ENST00000479525 ZNF487B1APH4 448 aa17.17■□□□□ 0.34
ECHDC1-216ENST00000479525 FASLGP48023 281 aa17.17■□□□□ 0.34
ECHDC1-216ENST00000479525 NFKB2Q00653 900 aa17.17■□□□□ 0.34
ECHDC1-216ENST00000479525 OLIG2Q13516 323 aa17.17■□□□□ 0.34
ECHDC1-216ENST00000479525 PTPRCAPQ14761 206 aa17.17■□□□□ 0.34
ECHDC1-216ENST00000479525 INSCQ1MX18 579 aa17.17■□□□□ 0.34
ECHDC1-216ENST00000479525 IYDQ6PHW0 289 aa17.17■□□□□ 0.34
ECHDC1-216ENST00000479525 TMC3Q7Z5M5 1100 aa17.17■□□□□ 0.34
ECHDC1-216ENST00000479525 ZNF605Q86T29 641 aa17.17■□□□□ 0.34
ECHDC1-216ENST00000479525 EXD3Q8N9H8 876 aa17.17■□□□□ 0.34
ECHDC1-216ENST00000479525 OR4D9Q8NGE8 314 aa17.17■□□□□ 0.34
ECHDC1-216ENST00000479525 SNRNP27Q8WVK2 155 aaKnown RBP17.17■□□□□ 0.34
ECHDC1-216ENST00000479525 TFB1MQ8WVM0 346 aaKnown RBP17.17■□□□□ 0.34
ECHDC1-216ENST00000479525 HTR3CQ8WXA8 447 aa17.17■□□□□ 0.34
ECHDC1-216ENST00000479525 TADA1Q96BN2 335 aa17.17■□□□□ 0.34
ECHDC1-216ENST00000479525 AKAP7Q9P0M2 348 aaPredicted RBP17.17■□□□□ 0.34
ECHDC1-216ENST00000479525 BOD1L1Q8NFC6 3051 aa17.17■□□□□ 0.34
ECHDC1-216ENST00000479525 hCG_1818297A0A087WSY0 165 aa17.16■□□□□ 0.34
ECHDC1-216ENST00000479525 A6NCN8 305 aa17.16■□□□□ 0.34
ECHDC1-216ENST00000479525 NDST3O95803 873 aa17.16■□□□□ 0.34
ECHDC1-216ENST00000479525 ZFXP17010 805 aaPredicted RBP17.16■□□□□ 0.34
ECHDC1-216ENST00000479525 RPL10P27635 214 aaKnown RBP17.16■□□□□ 0.34
ECHDC1-216ENST00000479525 CSTF2P33240 577 aaKnown RBP eCLIP17.16■□□□□ 0.34
ECHDC1-216ENST00000479525 GFERP55789 205 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms