RNA–Protein interactions for RNA: ENST00000479501.5

COL20A1-206, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 4,536 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-206ENST00000479501 RAD18Q9NS91 495 aa14.26□□□□□ -0.13
COL20A1-206ENST00000479501 THG1LQ9NWX6 298 aaKnown RBP14.26□□□□□ -0.13
COL20A1-206ENST00000479501 SH3GLB1Q9Y371 365 aa14.26□□□□□ -0.13
COL20A1-206ENST00000479501 MRPS23Q9Y3D9 190 aaKnown RBP14.26□□□□□ -0.13
COL20A1-206ENST00000479501 FAM72CH0Y354 149 aa14.26□□□□□ -0.13
COL20A1-206ENST00000479501 ALDH9A1P49189 494 aa14.26□□□□□ -0.13
COL20A1-206ENST00000479501 FAM72AQ5TYM5 149 aa14.26□□□□□ -0.13
COL20A1-206ENST00000479501 FAM72DQ6L9T8 149 aa14.26□□□□□ -0.13
COL20A1-206ENST00000479501 AGMOQ6ZNB7 445 aa14.26□□□□□ -0.13
COL20A1-206ENST00000479501 C11orf74Q86VG3 221 aa14.26□□□□□ -0.13
COL20A1-206ENST00000479501 FAM72BQ86X60 149 aa14.26□□□□□ -0.13
COL20A1-206ENST00000479501 CACUL1Q86Y37 369 aa14.26□□□□□ -0.13
COL20A1-206ENST00000479501 UBR7Q8N806 425 aa14.26□□□□□ -0.13
COL20A1-206ENST00000479501 DCBLD1Q8N8Z6 715 aa14.26□□□□□ -0.13
COL20A1-206ENST00000479501 REPS1Q96D71 796 aa14.26□□□□□ -0.13
COL20A1-206ENST00000479501 KRT84Q9NSB2 600 aa14.26□□□□□ -0.13
COL20A1-206ENST00000479501 FNIP2Q9P278 1114 aa14.26□□□□□ -0.13
COL20A1-206ENST00000479501 J3KR12 359 aa14.25□□□□□ -0.13
COL20A1-206ENST00000479501 UBXN8O00124 270 aa14.25□□□□□ -0.13
COL20A1-206ENST00000479501 OGNP20774 298 aaKnown RBP14.25□□□□□ -0.13
COL20A1-206ENST00000479501 RRM2P31350 389 aa14.25□□□□□ -0.13
COL20A1-206ENST00000479501 RALGDSQ12967 914 aa14.25□□□□□ -0.13
COL20A1-206ENST00000479501 PDZK1Q5T2W1 519 aa14.25□□□□□ -0.13
COL20A1-206ENST00000479501 UBAP2Q5T6F2 1119 aaKnown RBP14.25□□□□□ -0.13
COL20A1-206ENST00000479501 GCNT7Q6ZNI0 430 aa14.25□□□□□ -0.13
COL20A1-206ENST00000479501 TMEM40Q8WWA1 233 aa14.25□□□□□ -0.13
COL20A1-206ENST00000479501 STARD8Q92502 1023 aa14.25□□□□□ -0.13
COL20A1-206ENST00000479501 RIBC2Q9H4K1 309 aa14.25□□□□□ -0.13
COL20A1-206ENST00000479501 GLYATL1P3A0A0U1RQE8 302 aa14.25□□□□□ -0.13
COL20A1-206ENST00000479501 CCDC162PA2VCL2 907 aa14.25□□□□□ -0.13
COL20A1-206ENST00000479501 OR51F1A6NGY5 319 aa14.25□□□□□ -0.13
COL20A1-206ENST00000479501 EPN2O95208 641 aa14.25□□□□□ -0.13
COL20A1-206ENST00000479501 ANXA11P50995 505 aaKnown RBP14.25□□□□□ -0.13
COL20A1-206ENST00000479501 GSCP56915 257 aaPredicted RBP14.25□□□□□ -0.13
COL20A1-206ENST00000479501 LPIN1Q14693 890 aa14.25□□□□□ -0.13
COL20A1-206ENST00000479501 SLC9B1Q4ZJI4 515 aa14.25□□□□□ -0.13
COL20A1-206ENST00000479501 FAM47BQ8NA70 645 aa14.25□□□□□ -0.13
COL20A1-206ENST00000479501 KLHL23Q8NBE8 558 aa14.25□□□□□ -0.13
COL20A1-206ENST00000479501 SUSD6Q92537 303 aa14.25□□□□□ -0.13
COL20A1-206ENST00000479501 BORCS5Q969J3 196 aa14.25□□□□□ -0.13
COL20A1-206ENST00000479501 TIMMDC1Q9NPL8 285 aa14.25□□□□□ -0.13
COL20A1-206ENST00000479501 HECAQ9UBI9 543 aaPredicted RBP14.25□□□□□ -0.13
COL20A1-206ENST00000479501 SLC7A8Q9UHI5 535 aa14.25□□□□□ -0.13
COL20A1-206ENST00000479501 FKBPLQ9UIM3 349 aa14.25□□□□□ -0.13
COL20A1-206ENST00000479501 POMPQ9Y244 141 aa14.25□□□□□ -0.13
COL20A1-206ENST00000479501 TDRKHQ9Y2W6 561 aaKnown RBP14.25□□□□□ -0.13
COL20A1-206ENST00000479501 SEC24AO95486 1093 aa14.25□□□□□ -0.13
COL20A1-206ENST00000479501 TNK2Q07912 1038 aa14.25□□□□□ -0.13
COL20A1-206ENST00000479501 TSNQ15631 228 aaKnown RBP14.25□□□□□ -0.13
COL20A1-206ENST00000479501 SPATA19Q7Z5L4 167 aa14.25□□□□□ -0.13
COL20A1-206ENST00000479501 UBASH3BQ8TF42 649 aa14.25□□□□□ -0.13
COL20A1-206ENST00000479501 KBTBD7Q8WVZ9 684 aa14.25□□□□□ -0.13
COL20A1-206ENST00000479501 GPR22Q99680 433 aa14.25□□□□□ -0.13
COL20A1-206ENST00000479501 NUAK2Q9H093 628 aa14.25□□□□□ -0.13
COL20A1-206ENST00000479501 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.25□□□□□ -0.13
COL20A1-206ENST00000479501 SCML2Q9UQR0 700 aa14.25□□□□□ -0.13
COL20A1-206ENST00000479501 TBC1D3BA6NDS4 549 aa14.25□□□□□ -0.13
COL20A1-206ENST00000479501 SNTNA6NMZ2 147 aa14.25□□□□□ -0.13
COL20A1-206ENST00000479501 QSOX1O00391 747 aa14.25□□□□□ -0.13
COL20A1-206ENST00000479501 CAPN1P07384 714 aa14.25□□□□□ -0.13
COL20A1-206ENST00000479501 LSM3P62310 102 aaKnown RBP14.25□□□□□ -0.13
COL20A1-206ENST00000479501 CACNG1Q06432 222 aa14.25□□□□□ -0.13
COL20A1-206ENST00000479501 ADHFE1Q8IWW8 467 aa14.25□□□□□ -0.13
COL20A1-206ENST00000479501 REM2Q8IYK8 340 aaPredicted RBP14.25□□□□□ -0.13
COL20A1-206ENST00000479501 AADATQ8N5Z0 425 aa14.25□□□□□ -0.13
COL20A1-206ENST00000479501 CPSF7Q8N684 471 aaKnown RBP14.25□□□□□ -0.13
COL20A1-206ENST00000479501 ARL14EPQ8N8R7 260 aaPredicted RBP14.25□□□□□ -0.13
COL20A1-206ENST00000479501 POC5Q8NA72 575 aa14.25□□□□□ -0.13
COL20A1-206ENST00000479501 ADCY4Q8NFM4 1077 aa14.25□□□□□ -0.13
COL20A1-206ENST00000479501 OR13C4Q8NGS5 318 aa14.25□□□□□ -0.13
COL20A1-206ENST00000479501 NAT14Q8WUY8 206 aa14.25□□□□□ -0.13
COL20A1-206ENST00000479501 LPGAT1Q92604 370 aa14.25□□□□□ -0.13
COL20A1-206ENST00000479501 TADA1Q96BN2 335 aa14.25□□□□□ -0.13
COL20A1-206ENST00000479501 PLD4Q96BZ4 506 aa14.25□□□□□ -0.13
COL20A1-206ENST00000479501 ABHD8Q96I13 439 aa14.25□□□□□ -0.13
COL20A1-206ENST00000479501 C8orf48Q96LL4 319 aa14.25□□□□□ -0.13
COL20A1-206ENST00000479501 SLC2A13Q96QE2 648 aa14.25□□□□□ -0.13
COL20A1-206ENST00000479501 ABCB10Q9NRK6 738 aa14.25□□□□□ -0.13
COL20A1-206ENST00000479501 WASF2Q9Y6W5 498 aa14.25□□□□□ -0.13
COL20A1-206ENST00000479501 SLX4Q8IY92 1834 aa14.24□□□□□ -0.13
COL20A1-206ENST00000479501 SCN7AQ01118 1682 aa14.24□□□□□ -0.13
COL20A1-206ENST00000479501 SNAP91O60641 907 aa14.24□□□□□ -0.13
COL20A1-206ENST00000479501 FTH1P02794 183 aa14.24□□□□□ -0.13
COL20A1-206ENST00000479501 NTRK1P04629 796 aa14.24□□□□□ -0.13
COL20A1-206ENST00000479501 UGT2B4P06133 528 aa14.24□□□□□ -0.13
COL20A1-206ENST00000479501 CTNNB1P35222 781 aa14.24□□□□□ -0.13
COL20A1-206ENST00000479501 EPS8Q12929 822 aa14.24□□□□□ -0.13
COL20A1-206ENST00000479501 SKIV2LQ15477 1246 aaKnown RBP14.24□□□□□ -0.13
COL20A1-206ENST00000479501 DPY19L2P1Q6NXN4 242 aa14.24□□□□□ -0.13
COL20A1-206ENST00000479501 TRIM48Q8IWZ4 208 aa14.24□□□□□ -0.13
COL20A1-206ENST00000479501 BPIFB6Q8NFQ5 453 aa14.24□□□□□ -0.13
COL20A1-206ENST00000479501 TPD52L3Q96J77 140 aa14.24□□□□□ -0.13
COL20A1-206ENST00000479501 EURLQ9NYK6 297 aa14.24□□□□□ -0.13
COL20A1-206ENST00000479501 SELENONQ9NZV5 590 aa14.24□□□□□ -0.13
COL20A1-206ENST00000479501 SIRPGQ9P1W8 387 aa14.24□□□□□ -0.13
COL20A1-206ENST00000479501 SLC2A6Q9UGQ3 507 aa14.24□□□□□ -0.13
COL20A1-206ENST00000479501 SNX8Q9Y5X2 465 aa14.24□□□□□ -0.13
COL20A1-206ENST00000479501 CPQQ9Y646 472 aa14.24□□□□□ -0.13
COL20A1-206ENST00000479501 ARL5AQ9Y689 179 aa14.24□□□□□ -0.13
COL20A1-206ENST00000479501 PRAMEF1O95521 474 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms