RNA–Protein interactions for RNA: ENST00000478934.5

VPS52-217, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 2,602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-217ENST00000478934 ASLP04424 464 aa10.73□□□□□ -0.69
VPS52-217ENST00000478934 ITGB6P18564 788 aa10.73□□□□□ -0.69
VPS52-217ENST00000478934 SUOXP51687 545 aa10.73□□□□□ -0.69
VPS52-217ENST00000478934 OXCT1P55809 520 aa10.73□□□□□ -0.69
VPS52-217ENST00000478934 YBEYP58557 167 aaPredicted RBP10.73□□□□□ -0.69
VPS52-217ENST00000478934 UFM1P61960 85 aa10.73□□□□□ -0.69
VPS52-217ENST00000478934 NFKB2Q00653 900 aa10.73□□□□□ -0.69
VPS52-217ENST00000478934 SEMG2Q02383 582 aa10.73□□□□□ -0.69
VPS52-217ENST00000478934 MAPRE2Q15555 327 aa10.73□□□□□ -0.69
VPS52-217ENST00000478934 ZRANB3Q5FWF4 1079 aa10.73□□□□□ -0.69
VPS52-217ENST00000478934 PAGE3Q5JUK9 113 aa10.73□□□□□ -0.69
VPS52-217ENST00000478934 CTSL3PQ5NE16 218 aa10.73□□□□□ -0.69
VPS52-217ENST00000478934 KRT80Q6KB66 452 aa10.73□□□□□ -0.69
VPS52-217ENST00000478934 B3GNT6Q6ZMB0 384 aa10.73□□□□□ -0.69
VPS52-217ENST00000478934 ARHGAP22Q7Z5H3 698 aa10.73□□□□□ -0.69
VPS52-217ENST00000478934 GALNT7Q86SF2 657 aa10.73□□□□□ -0.69
VPS52-217ENST00000478934 RNF180Q86T96 592 aa10.73□□□□□ -0.69
VPS52-217ENST00000478934 CATSPER1Q8NEC5 780 aa10.73□□□□□ -0.69
VPS52-217ENST00000478934 B4GALNT2Q8NHY0 566 aa10.73□□□□□ -0.69
VPS52-217ENST00000478934 MGME1Q9BQP7 344 aa10.73□□□□□ -0.69
VPS52-217ENST00000478934 TRMOQ9BU70 441 aa10.73□□□□□ -0.69
VPS52-217ENST00000478934 ZNF696Q9H7X3 374 aa10.73□□□□□ -0.69
VPS52-217ENST00000478934 NLE1Q9NVX2 485 aaPredicted RBP10.73□□□□□ -0.69
VPS52-217ENST00000478934 UBA2Q9UBT2 640 aaPredicted RBP10.73□□□□□ -0.69
VPS52-217ENST00000478934 C2orf78A6NCI8 922 aa10.73□□□□□ -0.69
VPS52-217ENST00000478934 A8MX80 341 aa10.73□□□□□ -0.69
VPS52-217ENST00000478934 HTRA2O43464 458 aaPredicted RBP10.73□□□□□ -0.69
VPS52-217ENST00000478934 FOXD2O60548 495 aaPredicted RBP10.73□□□□□ -0.69
VPS52-217ENST00000478934 AOC2O75106 756 aa10.73□□□□□ -0.69
VPS52-217ENST00000478934 CRCPO75575 148 aa10.73□□□□□ -0.69
VPS52-217ENST00000478934 CAPNS1P04632 268 aa10.73□□□□□ -0.69
VPS52-217ENST00000478934 ZDHHC11BP0C7U3 371 aa10.73□□□□□ -0.69
VPS52-217ENST00000478934 CTPS1P17812 591 aa10.73□□□□□ -0.69
VPS52-217ENST00000478934 MC4RP32245 332 aa10.73□□□□□ -0.69
VPS52-217ENST00000478934 OR1D2P34982 312 aa10.73□□□□□ -0.69
VPS52-217ENST00000478934 ATP5C1P36542 298 aaKnown RBP10.73□□□□□ -0.69
VPS52-217ENST00000478934 PSMD8P48556 350 aa10.73□□□□□ -0.69
VPS52-217ENST00000478934 MAPKAPK2P49137 400 aa10.73□□□□□ -0.69
VPS52-217ENST00000478934 PRKCQQ04759 706 aa10.73□□□□□ -0.69
VPS52-217ENST00000478934 TNK2Q07912 1038 aa10.73□□□□□ -0.69
VPS52-217ENST00000478934 APOFQ13790 326 aa10.73□□□□□ -0.69
VPS52-217ENST00000478934 RPS6KA2Q15349 733 aa10.73□□□□□ -0.69
VPS52-217ENST00000478934 TYSND1Q2T9J0 566 aa10.73□□□□□ -0.69
VPS52-217ENST00000478934 ATXN7L2Q5T6C5 722 aaPredicted RBP10.73□□□□□ -0.69
VPS52-217ENST00000478934 RNF219Q5W0B1 726 aaPredicted RBP10.73□□□□□ -0.69
VPS52-217ENST00000478934 MIER2Q8N344 545 aa10.73□□□□□ -0.69
VPS52-217ENST00000478934 CBR4Q8N4T8 237 aa10.73□□□□□ -0.69
VPS52-217ENST00000478934 OR52B6Q8NGF0 335 aa10.73□□□□□ -0.69
VPS52-217ENST00000478934 GABPB2Q8TAK5 448 aaPredicted RBP10.73□□□□□ -0.69
VPS52-217ENST00000478934 KIAA1191Q96A73 305 aa10.73□□□□□ -0.69
VPS52-217ENST00000478934 EID2BQ96D98 161 aa10.73□□□□□ -0.69
VPS52-217ENST00000478934 ZNF597Q96LX8 424 aa10.73□□□□□ -0.69
VPS52-217ENST00000478934 PLEKHG4BQ96PX9 1271 aa10.73□□□□□ -0.69
VPS52-217ENST00000478934 PSKH2Q96QS6 385 aa10.73□□□□□ -0.69
VPS52-217ENST00000478934 GPATCH1Q9BRR8 931 aaKnown RBP10.73□□□□□ -0.69
VPS52-217ENST00000478934 SCUBE2Q9NQ36 999 aa10.73□□□□□ -0.69
VPS52-217ENST00000478934 OLA1Q9NTK5 396 aaKnown RBP10.73□□□□□ -0.69
VPS52-217ENST00000478934 DUS2Q9NX74 493 aaKnown RBP10.73□□□□□ -0.69
VPS52-217ENST00000478934 HSFX1Q9UBD0 423 aa10.73□□□□□ -0.69
VPS52-217ENST00000478934 EIF2B4Q9UI10 523 aaKnown RBP10.73□□□□□ -0.69
VPS52-217ENST00000478934 PCDHB7Q9Y5E2 793 aa10.73□□□□□ -0.69
VPS52-217ENST00000478934 RAI2Q9Y5P3 530 aa10.73□□□□□ -0.69
VPS52-217ENST00000478934 PLXNA3P51805 1871 aa10.73□□□□□ -0.69
VPS52-217ENST00000478934 K7ERQ8 282 aa10.72□□□□□ -0.69
VPS52-217ENST00000478934 SEC24AO95486 1093 aa10.72□□□□□ -0.69
VPS52-217ENST00000478934 TSPAN12O95859 305 aa10.72□□□□□ -0.69
VPS52-217ENST00000478934 CD160O95971 181 aa10.72□□□□□ -0.69
VPS52-217ENST00000478934 FGF4P08620 206 aa10.72□□□□□ -0.69
VPS52-217ENST00000478934 ALPIP09923 528 aa10.72□□□□□ -0.69
VPS52-217ENST00000478934 SLC6A2P23975 617 aa10.72□□□□□ -0.69
VPS52-217ENST00000478934 MZF1P28698 734 aaPredicted RBP10.72□□□□□ -0.69
VPS52-217ENST00000478934 CORO1AP31146 461 aaKnown RBP10.72□□□□□ -0.69
VPS52-217ENST00000478934 GKP32189 559 aa10.72□□□□□ -0.69
VPS52-217ENST00000478934 SLC26A3P40879 764 aa10.72□□□□□ -0.69
VPS52-217ENST00000478934 TRAF2Q12933 501 aa10.72□□□□□ -0.69
VPS52-217ENST00000478934 MAP7Q14244 749 aa10.72□□□□□ -0.69
VPS52-217ENST00000478934 SAMD4BQ5PRF9 694 aaKnown RBP10.72□□□□□ -0.69
VPS52-217ENST00000478934 TBCELQ5QJ74 424 aa10.72□□□□□ -0.69
VPS52-217ENST00000478934 RAB44Q7Z6P3 723 aaPredicted RBP10.72□□□□□ -0.69
VPS52-217ENST00000478934 ZBTB46Q86UZ6 589 aa10.72□□□□□ -0.69
VPS52-217ENST00000478934 EPHX4Q8IUS5 362 aa10.72□□□□□ -0.69
VPS52-217ENST00000478934 OFCC1Q8IZS5 231 aa10.72□□□□□ -0.69
VPS52-217ENST00000478934 CDYL2Q8N8U2 506 aa10.72□□□□□ -0.69
VPS52-217ENST00000478934 STAG3L4Q8TBR4 150 aa10.72□□□□□ -0.69
VPS52-217ENST00000478934 EZH1Q92800 747 aaPredicted RBP10.72□□□□□ -0.69
VPS52-217ENST00000478934 TDRD1Q9BXT4 1180 aaKnown RBP10.72□□□□□ -0.69
VPS52-217ENST00000478934 TFB2MQ9H5Q4 396 aaKnown RBP10.72□□□□□ -0.69
VPS52-217ENST00000478934 SLC52A3Q9NQ40 469 aa10.72□□□□□ -0.69
VPS52-217ENST00000478934 OLAHQ9NV23 265 aa10.72□□□□□ -0.69
VPS52-217ENST00000478934 TMEM161AQ9NX61 479 aa10.72□□□□□ -0.69
VPS52-217ENST00000478934 TAS2R13Q9NYV9 303 aa10.72□□□□□ -0.69
VPS52-217ENST00000478934 SEPT3Q9UH03 358 aa10.72□□□□□ -0.69
VPS52-217ENST00000478934 EVLQ9UI08 416 aaPredicted RBP10.72□□□□□ -0.69
VPS52-217ENST00000478934 AGO1Q9UL18 857 aaKnown RBP10.72□□□□□ -0.69
VPS52-217ENST00000478934 A0A1W2PQ45 241 aaPredicted RBP10.72□□□□□ -0.69
VPS52-217ENST00000478934 A0A1W2PQY0 241 aa10.72□□□□□ -0.69
VPS52-217ENST00000478934 OR6C75A6NL08 312 aa10.72□□□□□ -0.69
VPS52-217ENST00000478934 TBKBP1A7MCY6 615 aa10.72□□□□□ -0.69
VPS52-217ENST00000478934 ANGPT2O15123 496 aa10.72□□□□□ -0.69
VPS52-217ENST00000478934 TBC1D4O60343 1298 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms