RNA–Protein interactions for RNA: ENST00000478050.1

SF3B6-202, Transcript of splicing factor 3b subunit 6, humanhuman

TSL 2

Gene SF3B6, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-202ENST00000478050 CD300LGQ6UXG3 332 aa4.95□□□□□ -1.62
SF3B6-202ENST00000478050 IZUMO2Q6UXV1 221 aa4.95□□□□□ -1.62
SF3B6-202ENST00000478050 ARHGAP36Q6ZRI8 547 aa4.95□□□□□ -1.62
SF3B6-202ENST00000478050 PIWIL4Q7Z3Z4 852 aaKnown RBP4.95□□□□□ -1.62
SF3B6-202ENST00000478050 GALNT7Q86SF2 657 aa4.95□□□□□ -1.62
SF3B6-202ENST00000478050 DHDDSQ86SQ9 333 aa4.95□□□□□ -1.62
SF3B6-202ENST00000478050 LSRQ86X29 649 aaPredicted RBP4.95□□□□□ -1.62
SF3B6-202ENST00000478050 DCP1BQ8IZD4 617 aaKnown RBP4.95□□□□□ -1.62
SF3B6-202ENST00000478050 DEFB107AQ8IZN7 70 aa4.95□□□□□ -1.62
SF3B6-202ENST00000478050 CENPLQ8N0S6 344 aaPredicted RBP4.95□□□□□ -1.62
SF3B6-202ENST00000478050 ARHGAP18Q8N392 663 aa4.95□□□□□ -1.62
SF3B6-202ENST00000478050 FBXW8Q8N3Y1 598 aa4.95□□□□□ -1.62
SF3B6-202ENST00000478050 MFSD4AQ8N468 514 aa4.95□□□□□ -1.62
SF3B6-202ENST00000478050 TRPV1Q8NER1 839 aa4.95□□□□□ -1.62
SF3B6-202ENST00000478050 OR10T2Q8NGX3 314 aa4.95□□□□□ -1.62
SF3B6-202ENST00000478050 OR6P1Q8NGX9 317 aa4.95□□□□□ -1.62
SF3B6-202ENST00000478050 SPATA22Q8NHS9 363 aa4.95□□□□□ -1.62
SF3B6-202ENST00000478050 PIP4K2CQ8TBX8 421 aa4.95□□□□□ -1.62
SF3B6-202ENST00000478050 MAPK15Q8TD08 544 aa4.95□□□□□ -1.62
SF3B6-202ENST00000478050 GPBAR1Q8TDU6 330 aa4.95□□□□□ -1.62
SF3B6-202ENST00000478050 KCTD4Q8WVF5 259 aa4.95□□□□□ -1.62
SF3B6-202ENST00000478050 CASP10Q92851 521 aa4.95□□□□□ -1.62
SF3B6-202ENST00000478050 TIFAQ96CG3 184 aa4.95□□□□□ -1.62
SF3B6-202ENST00000478050 FUBP3Q96I24 572 aaKnown RBP eCLIP4.95□□□□□ -1.62
SF3B6-202ENST00000478050 ELMO2Q96JJ3 720 aa4.95□□□□□ -1.62
SF3B6-202ENST00000478050 FCRL2Q96LA5 508 aaPredicted RBP4.95□□□□□ -1.62
SF3B6-202ENST00000478050 C1orf74Q96LT6 269 aa4.95□□□□□ -1.62
SF3B6-202ENST00000478050 OR52B2Q96RD2 323 aa4.95□□□□□ -1.62
SF3B6-202ENST00000478050 TTC1Q99614 292 aa4.95□□□□□ -1.62
SF3B6-202ENST00000478050 MRPL57Q9BQC6 102 aaKnown RBP4.95□□□□□ -1.62
SF3B6-202ENST00000478050 PAAF1Q9BRP4 392 aa4.95□□□□□ -1.62
SF3B6-202ENST00000478050 FSD1LQ9BXM9 530 aa4.95□□□□□ -1.62
SF3B6-202ENST00000478050 RHOBTB2Q9BYZ6 727 aa4.95□□□□□ -1.62
SF3B6-202ENST00000478050 KLHL4Q9C0H6 718 aa4.95□□□□□ -1.62
SF3B6-202ENST00000478050 SLC39A8Q9C0K1 460 aa4.95□□□□□ -1.62
SF3B6-202ENST00000478050 SIK2Q9H0K1 926 aa4.95□□□□□ -1.62
SF3B6-202ENST00000478050 SLC25A51Q9H1U9 297 aa4.95□□□□□ -1.62
SF3B6-202ENST00000478050 MRPL46Q9H2W6 279 aaKnown RBP4.95□□□□□ -1.62
SF3B6-202ENST00000478050 ZNF385DQ9H6B1 395 aa4.95□□□□□ -1.62
SF3B6-202ENST00000478050 AGO3Q9H9G7 860 aaKnown RBP4.95□□□□□ -1.62
SF3B6-202ENST00000478050 CYP4F11Q9HBI6 524 aa4.95□□□□□ -1.62
SF3B6-202ENST00000478050 ARNT2Q9HBZ2 717 aa4.95□□□□□ -1.62
SF3B6-202ENST00000478050 VPS45Q9NRW7 570 aa4.95□□□□□ -1.62
SF3B6-202ENST00000478050 TREX1Q9NSU2 369 aa4.95□□□□□ -1.62
SF3B6-202ENST00000478050 SPATS2LQ9NUQ6 558 aaKnown RBP4.95□□□□□ -1.62
SF3B6-202ENST00000478050 TMLHEQ9NVH6 421 aa4.95□□□□□ -1.62
SF3B6-202ENST00000478050 RBM22Q9NW64 420 aaKnown RBP eCLIP4.95□□□□□ -1.62
SF3B6-202ENST00000478050 HACD3Q9P035 362 aa4.95□□□□□ -1.62
SF3B6-202ENST00000478050 PDP2Q9P2J9 529 aa4.95□□□□□ -1.62
SF3B6-202ENST00000478050 XPR1Q9UBH6 696 aa4.95□□□□□ -1.62
SF3B6-202ENST00000478050 IPO11Q9UI26 975 aaKnown RBP4.95□□□□□ -1.62
SF3B6-202ENST00000478050 VPS28Q9UK41 221 aa4.95□□□□□ -1.62
SF3B6-202ENST00000478050 FBXO5Q9UKT4 447 aa4.95□□□□□ -1.62
SF3B6-202ENST00000478050 PADI3Q9ULW8 664 aa4.95□□□□□ -1.62
SF3B6-202ENST00000478050 MAGED2Q9UNF1 606 aaPredicted RBP4.95□□□□□ -1.62
SF3B6-202ENST00000478050 POMPQ9Y244 141 aa4.95□□□□□ -1.62
SF3B6-202ENST00000478050 PCDHB14Q9Y5E9 798 aa4.95□□□□□ -1.62
SF3B6-202ENST00000478050 SQORQ9Y6N5 450 aa4.95□□□□□ -1.62
SF3B6-202ENST00000478050 CACNA1HO95180 2353 aa4.94□□□□□ -1.62
SF3B6-202ENST00000478050 NCOR2Q9Y618 2525 aa4.94□□□□□ -1.62
SF3B6-202ENST00000478050 ZFHX2Q9C0A1 2572 aaPredicted RBP4.94□□□□□ -1.62
SF3B6-202ENST00000478050 CDH23Q9H251 3354 aa4.94□□□□□ -1.62
SF3B6-202ENST00000478050 HSFX4A0A1B0GTS1 333 aaPredicted RBP4.94□□□□□ -1.62
SF3B6-202ENST00000478050 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP4.94□□□□□ -1.62
SF3B6-202ENST00000478050 HSFX3A0A1B0GWH4 333 aaPredicted RBP4.94□□□□□ -1.62
SF3B6-202ENST00000478050 MED19A0JLT2 244 aaPredicted RBP4.94□□□□□ -1.62
SF3B6-202ENST00000478050 DPPA5A6NC42 116 aa4.94□□□□□ -1.62
SF3B6-202ENST00000478050 GOLGA8TH3BQL2 631 aa4.94□□□□□ -1.62
SF3B6-202ENST00000478050 TMEM189-UBE2V1I3L0A0 370 aa4.94□□□□□ -1.62
SF3B6-202ENST00000478050 NEMP1O14524 444 aa4.94□□□□□ -1.62
SF3B6-202ENST00000478050 SLC7A4O43246 635 aa4.94□□□□□ -1.62
SF3B6-202ENST00000478050 PEX1O43933 1283 aa4.94□□□□□ -1.62
SF3B6-202ENST00000478050 DLX3O60479 287 aa4.94□□□□□ -1.62
SF3B6-202ENST00000478050 MGEA5O60502 916 aa4.94□□□□□ -1.62
SF3B6-202ENST00000478050 PMPCBO75439 489 aa4.94□□□□□ -1.62
SF3B6-202ENST00000478050 TADA2AO75478 443 aa4.94□□□□□ -1.62
SF3B6-202ENST00000478050 PDE5AO76074 875 aa4.94□□□□□ -1.62
SF3B6-202ENST00000478050 VAPBO95292 243 aa4.94□□□□□ -1.62
SF3B6-202ENST00000478050 MT-CYBP00156 380 aaPredicted RBP4.94□□□□□ -1.62
SF3B6-202ENST00000478050 PGK1P00558 417 aa4.94□□□□□ -1.62
SF3B6-202ENST00000478050 POMCP01189 267 aa4.94□□□□□ -1.62
SF3B6-202ENST00000478050 CHRNGP07510 517 aa4.94□□□□□ -1.62
SF3B6-202ENST00000478050 RBP1P09455 135 aa4.94□□□□□ -1.62
SF3B6-202ENST00000478050 SBK3P0C264 359 aa4.94□□□□□ -1.62
SF3B6-202ENST00000478050 SRFP11831 508 aa4.94□□□□□ -1.62
SF3B6-202ENST00000478050 CYBAP13498 195 aa4.94□□□□□ -1.62
SF3B6-202ENST00000478050 HOXB8P17481 243 aaPredicted RBP4.94□□□□□ -1.62
SF3B6-202ENST00000478050 TFEBP19484 476 aa4.94□□□□□ -1.62
SF3B6-202ENST00000478050 SAT1P21673 171 aa4.94□□□□□ -1.62
SF3B6-202ENST00000478050 PAX7P23759 505 aa4.94□□□□□ -1.62
SF3B6-202ENST00000478050 GABRB3P28472 473 aa4.94□□□□□ -1.62
SF3B6-202ENST00000478050 CD52P31358 61 aa4.94□□□□□ -1.62
SF3B6-202ENST00000478050 AVPR1AP37288 418 aa4.94□□□□□ -1.62
SF3B6-202ENST00000478050 THPOP40225 353 aa4.94□□□□□ -1.62
SF3B6-202ENST00000478050 SLC1A2P43004 574 aa4.94□□□□□ -1.62
SF3B6-202ENST00000478050 LEPRP48357 1165 aaKnown RBP4.94□□□□□ -1.62
SF3B6-202ENST00000478050 SERPINH1P50454 418 aaKnown RBP4.94□□□□□ -1.62
SF3B6-202ENST00000478050 PAPOLAP51003 745 aaKnown RBP4.94□□□□□ -1.62
SF3B6-202ENST00000478050 RENBPP51606 427 aa4.94□□□□□ -1.62
SF3B6-202ENST00000478050 CLCN2P51788 898 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms