RNA–Protein interactions for RNA: ENST00000477554.5

PTPN7-209, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 2

Gene PTPN7, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-209ENST00000477554 IVLP07476 585 aa17.5■□□□□ 0.39
PTPN7-209ENST00000477554 CTAGE8P0CG41 777 aa17.5■□□□□ 0.39
PTPN7-209ENST00000477554 KELP23276 732 aa17.5■□□□□ 0.39
PTPN7-209ENST00000477554 ADRA1AP35348 466 aa17.5■□□□□ 0.39
PTPN7-209ENST00000477554 MSLNQ13421 630 aaPredicted RBP17.5■□□□□ 0.39
PTPN7-209ENST00000477554 PYCR3Q53H96 274 aa17.5■□□□□ 0.39
PTPN7-209ENST00000477554 CTAGE6Q86UF2 777 aa17.5■□□□□ 0.39
PTPN7-209ENST00000477554 NLRP8Q86W28 1048 aa17.5■□□□□ 0.39
PTPN7-209ENST00000477554 CDKL3Q8IVW4 592 aaPredicted RBP17.5■□□□□ 0.39
PTPN7-209ENST00000477554 CTAGE4Q8IX94 777 aa17.5■□□□□ 0.39
PTPN7-209ENST00000477554 ATL2Q8NHH9 583 aa17.5■□□□□ 0.39
PTPN7-209ENST00000477554 BLOC1S5Q8TDH9 187 aa17.5■□□□□ 0.39
PTPN7-209ENST00000477554 TMEM121Q9BTD3 319 aa17.5■□□□□ 0.39
PTPN7-209ENST00000477554 SPATA16Q9BXB7 569 aa17.5■□□□□ 0.39
PTPN7-209ENST00000477554 DPEP2Q9H4A9 486 aa17.5■□□□□ 0.39
PTPN7-209ENST00000477554 TAAR2Q9P1P5 351 aa17.5■□□□□ 0.39
PTPN7-209ENST00000477554 RALYQ9UKM9 306 aaKnown RBP17.5■□□□□ 0.39
PTPN7-209ENST00000477554 RNF215Q9Y6U7 377 aa17.5■□□□□ 0.39
PTPN7-209ENST00000477554 APC2O95996 2303 aa17.5■□□□□ 0.39
PTPN7-209ENST00000477554 SRRM3A6NNA2 597 aaPredicted RBP17.49■□□□□ 0.39
PTPN7-209ENST00000477554 AGRPO00253 132 aa17.49■□□□□ 0.39
PTPN7-209ENST00000477554 GAPDHSO14556 408 aaPredicted RBP17.49■□□□□ 0.39
PTPN7-209ENST00000477554 MTSS1O43312 755 aa17.49■□□□□ 0.39
PTPN7-209ENST00000477554 ASMTLO95671 621 aa17.49■□□□□ 0.39
PTPN7-209ENST00000477554 GP1BAP07359 652 aa17.49■□□□□ 0.39
PTPN7-209ENST00000477554 CCL7P80098 99 aa17.49■□□□□ 0.39
PTPN7-209ENST00000477554 CACNA1BQ00975 2339 aa17.49■□□□□ 0.39
PTPN7-209ENST00000477554 CYP1B1Q16678 543 aa17.49■□□□□ 0.39
PTPN7-209ENST00000477554 DRICH1Q6PGQ1 229 aaPredicted RBP17.49■□□□□ 0.39
PTPN7-209ENST00000477554 OGFOD3Q6PK18 319 aa17.49■□□□□ 0.39
PTPN7-209ENST00000477554 TMPRSS9Q7Z410 1059 aa17.49■□□□□ 0.39
PTPN7-209ENST00000477554 B3GNT8Q7Z7M8 397 aa17.49■□□□□ 0.39
PTPN7-209ENST00000477554 SDR16C5Q8N3Y7 309 aa17.49■□□□□ 0.39
PTPN7-209ENST00000477554 PRELID2Q8N945 189 aa17.49■□□□□ 0.39
PTPN7-209ENST00000477554 Q8N9G6 341 aaPredicted RBP17.49■□□□□ 0.39
PTPN7-209ENST00000477554 NBEAQ8NFP9 2946 aa17.49■□□□□ 0.39
PTPN7-209ENST00000477554 SLC35B2Q8TB61 432 aa17.49■□□□□ 0.39
PTPN7-209ENST00000477554 CCHCR1Q8TD31 782 aa17.49■□□□□ 0.39
PTPN7-209ENST00000477554 MAGOHBQ96A72 148 aaKnown RBP17.49■□□□□ 0.39
PTPN7-209ENST00000477554 CCDC97Q96F63 343 aaPredicted RBP17.49■□□□□ 0.39
PTPN7-209ENST00000477554 SPATA13Q96N96 652 aa17.49■□□□□ 0.39
PTPN7-209ENST00000477554 RUNDC3BQ96NL0 473 aa17.49■□□□□ 0.39
PTPN7-209ENST00000477554 VAT1Q99536 393 aa17.49■□□□□ 0.39
PTPN7-209ENST00000477554 CARD6Q9BX69 1037 aa17.49■□□□□ 0.39
PTPN7-209ENST00000477554 SYNDIG1Q9H7V2 258 aa17.49■□□□□ 0.39
PTPN7-209ENST00000477554 PIH1D1Q9NWS0 290 aaKnown RBP17.49■□□□□ 0.39
PTPN7-209ENST00000477554 ATXN10Q9UBB4 475 aa17.49■□□□□ 0.39
PTPN7-209ENST00000477554 TRHDEQ9UKU6 1024 aa17.49■□□□□ 0.39
PTPN7-209ENST00000477554 ARL5AQ9Y689 179 aa17.49■□□□□ 0.39
PTPN7-209ENST00000477554 TRBV23OR9-2A0A075B6M9 112 aa17.48■□□□□ 0.39
PTPN7-209ENST00000477554 PHF2O75151 1096 aa17.48■□□□□ 0.39
PTPN7-209ENST00000477554 CSO75390 466 aaKnown RBP17.48■□□□□ 0.39
PTPN7-209ENST00000477554 ZNF189O75820 626 aaPredicted RBP17.48■□□□□ 0.39
PTPN7-209ENST00000477554 ETS1P14921 441 aa17.48■□□□□ 0.39
PTPN7-209ENST00000477554 ZNF8P17098 575 aaPredicted RBP17.48■□□□□ 0.39
PTPN7-209ENST00000477554 MPP3Q13368 585 aa17.48■□□□□ 0.39
PTPN7-209ENST00000477554 HLTFQ14527 1009 aaKnown RBP eCLIP17.48■□□□□ 0.39
PTPN7-209ENST00000477554 DENND5AQ6IQ26 1287 aa17.48■□□□□ 0.39
PTPN7-209ENST00000477554 LVRNQ6Q4G3 990 aa17.48■□□□□ 0.39
PTPN7-209ENST00000477554 PROSER1Q86XN7 944 aa17.48■□□□□ 0.39
PTPN7-209ENST00000477554 NAGSQ8N159 534 aa17.48■□□□□ 0.39
PTPN7-209ENST00000477554 GLIS1Q8NBF1 620 aa17.48■□□□□ 0.39
PTPN7-209ENST00000477554 C1orf54Q8WWF1 131 aa17.48■□□□□ 0.39
PTPN7-209ENST00000477554 OR2M4Q96R27 311 aa17.48■□□□□ 0.39
PTPN7-209ENST00000477554 OR2AG1Q9H205 316 aa17.48■□□□□ 0.39
PTPN7-209ENST00000477554 KCTD5Q9NXV2 234 aa17.48■□□□□ 0.39
PTPN7-209ENST00000477554 FEZ2Q9UHY8 353 aaPredicted RBP17.48■□□□□ 0.39
PTPN7-209ENST00000477554 ATXN7L1Q9ULK2 861 aaPredicted RBP17.48■□□□□ 0.39
PTPN7-209ENST00000477554 RAXQ9Y2V3 346 aa17.48■□□□□ 0.39
PTPN7-209ENST00000477554 CCL22O00626 93 aa17.47■□□□□ 0.39
PTPN7-209ENST00000477554 LIASO43766 372 aa17.47■□□□□ 0.39
PTPN7-209ENST00000477554 UGT1A9O60656 530 aa17.47■□□□□ 0.39
PTPN7-209ENST00000477554 ECEL1O95672 775 aa17.47■□□□□ 0.39
PTPN7-209ENST00000477554 UGT1A6P19224 532 aa17.47■□□□□ 0.39
PTPN7-209ENST00000477554 UGT1A1P22309 533 aa17.47■□□□□ 0.39
PTPN7-209ENST00000477554 UGT1A4P22310 534 aa17.47■□□□□ 0.39
PTPN7-209ENST00000477554 UGT1A3P35503 534 aa17.47■□□□□ 0.39
PTPN7-209ENST00000477554 UGT1A5P35504 534 aa17.47■□□□□ 0.39
PTPN7-209ENST00000477554 ACTR1BP42025 376 aa17.47■□□□□ 0.39
PTPN7-209ENST00000477554 FNTAP49354 379 aa17.47■□□□□ 0.39
PTPN7-209ENST00000477554 DUSP3P51452 185 aaPredicted RBP17.47■□□□□ 0.39
PTPN7-209ENST00000477554 ACTR1AP61163 376 aa17.47■□□□□ 0.39
PTPN7-209ENST00000477554 E2F1Q01094 437 aa17.47■□□□□ 0.39
PTPN7-209ENST00000477554 PLA2G4EQ3MJ16 856 aa17.47■□□□□ 0.39
PTPN7-209ENST00000477554 ATP13A5Q4VNC0 1218 aa17.47■□□□□ 0.39
PTPN7-209ENST00000477554 RANBP10Q6VN20 620 aa17.47■□□□□ 0.39
PTPN7-209ENST00000477554 ADGRG6Q86SQ4 1221 aa17.47■□□□□ 0.39
PTPN7-209ENST00000477554 ZNF761Q86XN6 746 aaPredicted RBP17.47■□□□□ 0.39
PTPN7-209ENST00000477554 ZDHHC1Q8WTX9 485 aa17.47■□□□□ 0.39
PTPN7-209ENST00000477554 ATXN7L3BQ96GX2 97 aa17.47■□□□□ 0.39
PTPN7-209ENST00000477554 FERMT1Q9BQL6 677 aa17.47■□□□□ 0.39
PTPN7-209ENST00000477554 FOXP3Q9BZS1 431 aa17.47■□□□□ 0.39
PTPN7-209ENST00000477554 ABCG4Q9H172 646 aa17.47■□□□□ 0.39
PTPN7-209ENST00000477554 CCDC86Q9H6F5 360 aaKnown RBP17.47■□□□□ 0.39
PTPN7-209ENST00000477554 UGT1A7Q9HAW7 530 aa17.47■□□□□ 0.39
PTPN7-209ENST00000477554 UGT1A10Q9HAW8 530 aa17.47■□□□□ 0.39
PTPN7-209ENST00000477554 UGT1A8Q9HAW9 530 aa17.47■□□□□ 0.39
PTPN7-209ENST00000477554 IL26Q9NPH9 171 aa17.47■□□□□ 0.39
PTPN7-209ENST00000477554 TRNAU1APQ9NX07 287 aaKnown RBP17.47■□□□□ 0.39
PTPN7-209ENST00000477554 IL17CQ9P0M4 197 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms