RNA–Protein interactions for RNA: ENST00000477421.2

COL27A1-204, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 3,991 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-204ENST00000477421 IDO1P14902 403 aa10.96□□□□□ -0.65
COL27A1-204ENST00000477421 CYP4F8P98187 520 aa10.96□□□□□ -0.65
COL27A1-204ENST00000477421 ACSM2AQ08AH3 577 aa10.96□□□□□ -0.65
COL27A1-204ENST00000477421 DGCR6Q14129 220 aa10.96□□□□□ -0.65
COL27A1-204ENST00000477421 GSTA3Q16772 222 aa10.96□□□□□ -0.65
COL27A1-204ENST00000477421 ARHGAP15Q53QZ3 475 aa10.96□□□□□ -0.65
COL27A1-204ENST00000477421 SFT2D3Q587I9 215 aa10.96□□□□□ -0.65
COL27A1-204ENST00000477421 ACSM2BQ68CK6 577 aa10.96□□□□□ -0.65
COL27A1-204ENST00000477421 CPSF7Q8N684 471 aaKnown RBP10.96□□□□□ -0.65
COL27A1-204ENST00000477421 PNPT1Q8TCS8 783 aaKnown RBP10.96□□□□□ -0.65
COL27A1-204ENST00000477421 CANT1Q8WVQ1 401 aa10.96□□□□□ -0.65
COL27A1-204ENST00000477421 MYO19Q96H55 970 aa10.96□□□□□ -0.65
COL27A1-204ENST00000477421 CAPNS2Q96L46 248 aa10.96□□□□□ -0.65
COL27A1-204ENST00000477421 NR1H4Q96RI1 486 aaPredicted RBP10.96□□□□□ -0.65
COL27A1-204ENST00000477421 DHRS4Q9BTZ2 278 aa10.96□□□□□ -0.65
COL27A1-204ENST00000477421 CCDC106Q9BWC9 280 aa10.96□□□□□ -0.65
COL27A1-204ENST00000477421 MAGEH1Q9H213 219 aa10.96□□□□□ -0.65
COL27A1-204ENST00000477421 NME7Q9Y5B8 376 aa10.96□□□□□ -0.65
COL27A1-204ENST00000477421 C5orf58C9J3I9 102 aa10.96□□□□□ -0.65
COL27A1-204ENST00000477421 NEDD8-MDP1E9PL57 170 aa10.96□□□□□ -0.65
COL27A1-204ENST00000477421 M0R3G1 203 aa10.96□□□□□ -0.65
COL27A1-204ENST00000477421 SYN3O14994 580 aa10.96□□□□□ -0.65
COL27A1-204ENST00000477421 GLDCP23378 1020 aa10.96□□□□□ -0.65
COL27A1-204ENST00000477421 RBM23Q86U06 439 aaKnown RBP10.96□□□□□ -0.65
COL27A1-204ENST00000477421 CILP2Q8IUL8 1156 aa10.96□□□□□ -0.65
COL27A1-204ENST00000477421 MAGED4Q96JG8 741 aa10.96□□□□□ -0.65
COL27A1-204ENST00000477421 DACH2Q96NX9 599 aa10.96□□□□□ -0.65
COL27A1-204ENST00000477421 UNC93B1Q9H1C4 597 aa10.96□□□□□ -0.65
COL27A1-204ENST00000477421 EXOSC4Q9NPD3 245 aaKnown RBP10.96□□□□□ -0.65
COL27A1-204ENST00000477421 PCDH12Q9NPG4 1184 aa10.96□□□□□ -0.65
COL27A1-204ENST00000477421 NDUFA13Q9P0J0 144 aa10.96□□□□□ -0.65
COL27A1-204ENST00000477421 HECAQ9UBI9 543 aaPredicted RBP10.96□□□□□ -0.65
COL27A1-204ENST00000477421 TNPO3Q9Y5L0 923 aaKnown RBP10.96□□□□□ -0.65
COL27A1-204ENST00000477421 SNX8Q9Y5X2 465 aa10.96□□□□□ -0.65
COL27A1-204ENST00000477421 OR2AG2A6NM03 316 aa10.96□□□□□ -0.66
COL27A1-204ENST00000477421 GABRDO14764 452 aa10.96□□□□□ -0.66
COL27A1-204ENST00000477421 TCF3P15923 654 aa10.96□□□□□ -0.66
COL27A1-204ENST00000477421 AQP1P29972 269 aa10.96□□□□□ -0.66
COL27A1-204ENST00000477421 HNF4AP41235 474 aa10.96□□□□□ -0.66
COL27A1-204ENST00000477421 RPL5P46777 297 aaKnown RBP10.96□□□□□ -0.66
COL27A1-204ENST00000477421 GSCP56915 257 aaPredicted RBP10.96□□□□□ -0.66
COL27A1-204ENST00000477421 HMGCS1Q01581 520 aa10.96□□□□□ -0.66
COL27A1-204ENST00000477421 USP45Q70EL2 814 aa10.96□□□□□ -0.66
COL27A1-204ENST00000477421 TMCO2Q7Z6W1 182 aaPredicted RBP10.96□□□□□ -0.66
COL27A1-204ENST00000477421 SATL1Q86VE3 508 aa10.96□□□□□ -0.66
COL27A1-204ENST00000477421 SYT12Q8IV01 421 aa10.96□□□□□ -0.66
COL27A1-204ENST00000477421 C2orf73Q8N5S3 287 aaPredicted RBP10.96□□□□□ -0.66
COL27A1-204ENST00000477421 HJURPQ8NCD3 748 aaPredicted RBP10.96□□□□□ -0.66
COL27A1-204ENST00000477421 SMIM14Q96QK8 99 aa10.96□□□□□ -0.66
COL27A1-204ENST00000477421 OLFM1Q99784 485 aa10.96□□□□□ -0.66
COL27A1-204ENST00000477421 C9orf16Q9BUW7 83 aa10.96□□□□□ -0.66
COL27A1-204ENST00000477421 RMND5AQ9H871 391 aa10.96□□□□□ -0.66
COL27A1-204ENST00000477421 COQ10BQ9H8M1 238 aa10.96□□□□□ -0.66
COL27A1-204ENST00000477421 TDRKHQ9Y2W6 561 aaKnown RBP10.96□□□□□ -0.66
COL27A1-204ENST00000477421 A0A088AWK7 358 aa10.95□□□□□ -0.66
COL27A1-204ENST00000477421 MTMR11A4FU01 709 aa10.95□□□□□ -0.66
COL27A1-204ENST00000477421 CLK1P49759 484 aaKnown RBP10.95□□□□□ -0.66
COL27A1-204ENST00000477421 SNRPD1P62314 119 aaKnown RBP10.95□□□□□ -0.66
COL27A1-204ENST00000477421 C16orf72Q14CZ0 275 aa10.95□□□□□ -0.66
COL27A1-204ENST00000477421 TAZQ16635 292 aa10.95□□□□□ -0.66
COL27A1-204ENST00000477421 LIN52Q52LA3 116 aa10.95□□□□□ -0.66
COL27A1-204ENST00000477421 PRMT9Q6P2P2 845 aa10.95□□□□□ -0.66
COL27A1-204ENST00000477421 GET4Q7L5D6 327 aaPredicted RBP10.95□□□□□ -0.66
COL27A1-204ENST00000477421 SERPINA9Q86WD7 417 aa10.95□□□□□ -0.66
COL27A1-204ENST00000477421 APOLD1Q96LR9 279 aa10.95□□□□□ -0.66
COL27A1-204ENST00000477421 OR52E6Q96RD3 313 aa10.95□□□□□ -0.66
COL27A1-204ENST00000477421 EMILIN2Q9BXX0 1053 aa10.95□□□□□ -0.66
COL27A1-204ENST00000477421 TMEM88BA6NKF7 163 aa10.95□□□□□ -0.66
COL27A1-204ENST00000477421 OR1I1O60431 355 aa10.95□□□□□ -0.66
COL27A1-204ENST00000477421 WDR47O94967 919 aa10.95□□□□□ -0.66
COL27A1-204ENST00000477421 OTCP00480 354 aa10.95□□□□□ -0.66
COL27A1-204ENST00000477421 FYNP06241 537 aa10.95□□□□□ -0.66
COL27A1-204ENST00000477421 AGTR2P50052 363 aa10.95□□□□□ -0.66
COL27A1-204ENST00000477421 MTPNP58546 118 aa10.95□□□□□ -0.66
COL27A1-204ENST00000477421 NPAS4Q8IUM7 802 aa10.95□□□□□ -0.66
COL27A1-204ENST00000477421 FIBCD1Q8N539 461 aa10.95□□□□□ -0.66
COL27A1-204ENST00000477421 ZNF366Q8N895 744 aa10.95□□□□□ -0.66
COL27A1-204ENST00000477421 OSCP1Q8WVF1 389 aa10.95□□□□□ -0.66
COL27A1-204ENST00000477421 RIBC2Q9H4K1 309 aa10.95□□□□□ -0.66
COL27A1-204ENST00000477421 POLR1BQ9H9Y6 1135 aa10.95□□□□□ -0.66
COL27A1-204ENST00000477421 EMCNQ9ULC0 261 aa10.95□□□□□ -0.66
COL27A1-204ENST00000477421 LRRC42Q9Y546 428 aa10.95□□□□□ -0.66
COL27A1-204ENST00000477421 ZNF487B1APH4 448 aa10.95□□□□□ -0.66
COL27A1-204ENST00000477421 MAP3K13O43283 966 aa10.95□□□□□ -0.66
COL27A1-204ENST00000477421 NPHS1O60500 1241 aa10.95□□□□□ -0.66
COL27A1-204ENST00000477421 FCGR1AP12314 374 aa10.95□□□□□ -0.66
COL27A1-204ENST00000477421 RAP1GDS1P52306 607 aa10.95□□□□□ -0.66
COL27A1-204ENST00000477421 DIO3P55073 304 aa10.95□□□□□ -0.66
COL27A1-204ENST00000477421 CDH4P55283 916 aa10.95□□□□□ -0.66
COL27A1-204ENST00000477421 LIPEQ05469 1076 aa10.95□□□□□ -0.66
COL27A1-204ENST00000477421 LYSMD3Q7Z3D4 306 aa10.95□□□□□ -0.66
COL27A1-204ENST00000477421 SCD5Q86SK9 330 aa10.95□□□□□ -0.66
COL27A1-204ENST00000477421 SAPCD2Q86UD0 394 aa10.95□□□□□ -0.66
COL27A1-204ENST00000477421 RBFAQ8N0V3 343 aa10.95□□□□□ -0.66
COL27A1-204ENST00000477421 PAIP1Q9H074 479 aaKnown RBP10.95□□□□□ -0.66
COL27A1-204ENST00000477421 ARMC7Q9H6L4 198 aa10.95□□□□□ -0.66
COL27A1-204ENST00000477421 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.95□□□□□ -0.66
COL27A1-204ENST00000477421 GNPTGQ9UJJ9 305 aa10.95□□□□□ -0.66
COL27A1-204ENST00000477421 SCML2Q9UQR0 700 aa10.95□□□□□ -0.66
COL27A1-204ENST00000477421 BHMG1C9JSJ3 638 aaPredicted RBP10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms