RNA–Protein interactions for RNA: ENST00000477264.1

CLSTN1-205, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 2,169 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-205ENST00000477264 TAS2R39P59534 338 aa15.18■□□□□ 0.02
CLSTN1-205ENST00000477264 PURAQ00577 322 aaKnown RBP15.18■□□□□ 0.02
CLSTN1-205ENST00000477264 CDC42EP1Q00587 391 aa15.18■□□□□ 0.02
CLSTN1-205ENST00000477264 NFKB2Q00653 900 aa15.18■□□□□ 0.02
CLSTN1-205ENST00000477264 DNASE1L3Q13609 305 aa15.18■□□□□ 0.02
CLSTN1-205ENST00000477264 PIWIL3Q7Z3Z3 882 aaKnown RBP15.18■□□□□ 0.02
CLSTN1-205ENST00000477264 DSG4Q86SJ6 1040 aa15.18■□□□□ 0.02
CLSTN1-205ENST00000477264 PIGZQ86VD9 579 aa15.18■□□□□ 0.02
CLSTN1-205ENST00000477264 UNC93AQ86WB7 457 aa15.18■□□□□ 0.02
CLSTN1-205ENST00000477264 TMEM192Q8IY95 271 aa15.18■□□□□ 0.02
CLSTN1-205ENST00000477264 CLYBLQ8N0X4 340 aa15.18■□□□□ 0.02
CLSTN1-205ENST00000477264 C7orf31Q8N865 590 aa15.18■□□□□ 0.02
CLSTN1-205ENST00000477264 C2CD4AQ8NCU7 369 aaPredicted RBP15.18■□□□□ 0.02
CLSTN1-205ENST00000477264 PPHLN1Q8NEY8 458 aaKnown RBP15.18■□□□□ 0.02
CLSTN1-205ENST00000477264 OR13J1Q8NGT2 312 aa15.18■□□□□ 0.02
CLSTN1-205ENST00000477264 ZNF566Q969W8 418 aa15.18■□□□□ 0.02
CLSTN1-205ENST00000477264 IL1RL2Q9HB29 575 aa15.18■□□□□ 0.02
CLSTN1-205ENST00000477264 TNFRSF12AQ9NP84 129 aa15.18■□□□□ 0.02
CLSTN1-205ENST00000477264 SDR39U1Q9NRG7 319 aaPredicted RBP15.18■□□□□ 0.02
CLSTN1-205ENST00000477264 UGT2A1Q9Y4X1 527 aa15.18■□□□□ 0.02
CLSTN1-205ENST00000477264 TBKBP1A7MCY6 615 aa15.17■□□□□ 0.02
CLSTN1-205ENST00000477264 HAS3O00219 553 aa15.17■□□□□ 0.02
CLSTN1-205ENST00000477264 TNFRSF10AO00220 468 aa15.17■□□□□ 0.02
CLSTN1-205ENST00000477264 B4GAT1O43505 415 aa15.17■□□□□ 0.02
CLSTN1-205ENST00000477264 DYRK3O43781 588 aa15.17■□□□□ 0.02
CLSTN1-205ENST00000477264 CHRNA1P02708 482 aa15.17■□□□□ 0.02
CLSTN1-205ENST00000477264 CPB1P15086 417 aa15.17■□□□□ 0.02
CLSTN1-205ENST00000477264 NFKB1P19838 968 aa15.17■□□□□ 0.02
CLSTN1-205ENST00000477264 RCVRNP35243 200 aa15.17■□□□□ 0.02
CLSTN1-205ENST00000477264 ADAM17P78536 824 aa15.17■□□□□ 0.02
CLSTN1-205ENST00000477264 IFITM2Q01629 132 aa15.17■□□□□ 0.02
CLSTN1-205ENST00000477264 MBTD1Q05BQ5 628 aa15.17■□□□□ 0.02
CLSTN1-205ENST00000477264 GRIK2Q13002 908 aa15.17■□□□□ 0.02
CLSTN1-205ENST00000477264 KRR1Q13601 381 aaKnown RBP15.17■□□□□ 0.02
CLSTN1-205ENST00000477264 SELPLGQ14242 412 aa15.17■□□□□ 0.02
CLSTN1-205ENST00000477264 ZNF460Q14592 562 aa15.17■□□□□ 0.02
CLSTN1-205ENST00000477264 ACAP2Q15057 778 aa15.17■□□□□ 0.02
CLSTN1-205ENST00000477264 ZNF181Q2M3W8 571 aa15.17■□□□□ 0.02
CLSTN1-205ENST00000477264 CYHR1Q6ZMK1 362 aa15.17■□□□□ 0.02
CLSTN1-205ENST00000477264 PRR23BQ6ZRT6 265 aa15.17■□□□□ 0.02
CLSTN1-205ENST00000477264 LRRC49Q8IUZ0 686 aa15.17■□□□□ 0.02
CLSTN1-205ENST00000477264 RIMKLAQ8IXN7 391 aa15.17■□□□□ 0.02
CLSTN1-205ENST00000477264 CLEC4FQ8N1N0 589 aa15.17■□□□□ 0.02
CLSTN1-205ENST00000477264 ELMOD1Q8N336 334 aa15.17■□□□□ 0.02
CLSTN1-205ENST00000477264 HSFY1Q96LI6 401 aa15.17■□□□□ 0.02
CLSTN1-205ENST00000477264 NODALQ96S42 347 aa15.17■□□□□ 0.02
CLSTN1-205ENST00000477264 CHID1Q9BWS9 393 aa15.17■□□□□ 0.02
CLSTN1-205ENST00000477264 CDHR5Q9HBB8 845 aa15.17■□□□□ 0.02
CLSTN1-205ENST00000477264 PAK1IP1Q9NWT1 392 aaPredicted RBP15.17■□□□□ 0.02
CLSTN1-205ENST00000477264 USE1Q9NZ43 259 aa15.17■□□□□ 0.02
CLSTN1-205ENST00000477264 GRXCR2A6NFK2 248 aa15.17■□□□□ 0.02
CLSTN1-205ENST00000477264 NEMP2A6NFY4 417 aa15.17■□□□□ 0.02
CLSTN1-205ENST00000477264 AURKAO14965 403 aa15.17■□□□□ 0.02
CLSTN1-205ENST00000477264 NADKO95544 446 aaPredicted RBP15.17■□□□□ 0.02
CLSTN1-205ENST00000477264 CHEK2O96017 543 aa15.17■□□□□ 0.02
CLSTN1-205ENST00000477264 NPPAP01160 153 aa15.17■□□□□ 0.02
CLSTN1-205ENST00000477264 S100BP04271 92 aaPredicted RBP15.17■□□□□ 0.02
CLSTN1-205ENST00000477264 HTR1AP08908 422 aa15.17■□□□□ 0.02
CLSTN1-205ENST00000477264 CCDC159P0C7I6 412 aa15.17■□□□□ 0.02
CLSTN1-205ENST00000477264 MTHFD1P11586 935 aaKnown RBP15.17■□□□□ 0.02
CLSTN1-205ENST00000477264 IL12AP29459 219 aa15.17■□□□□ 0.02
CLSTN1-205ENST00000477264 CD68P34810 354 aaPredicted RBP15.17■□□□□ 0.02
CLSTN1-205ENST00000477264 CLCN5P51795 746 aa15.17■□□□□ 0.02
CLSTN1-205ENST00000477264 GP2P55259 537 aaKnown RBP15.17■□□□□ 0.02
CLSTN1-205ENST00000477264 LIPEQ05469 1076 aa15.17■□□□□ 0.02
CLSTN1-205ENST00000477264 IL18R1Q13478 541 aa15.17■□□□□ 0.02
CLSTN1-205ENST00000477264 NFYCQ13952 458 aa15.17■□□□□ 0.02
CLSTN1-205ENST00000477264 CAPRIN1Q14444 709 aaKnown RBP15.17■□□□□ 0.02
CLSTN1-205ENST00000477264 FAM187BQ17R55 369 aa15.17■□□□□ 0.02
CLSTN1-205ENST00000477264 VPS26BQ4G0F5 336 aa15.17■□□□□ 0.02
CLSTN1-205ENST00000477264 BTBD8Q5XKL5 378 aa15.17■□□□□ 0.02
CLSTN1-205ENST00000477264 BLOC1S3Q6QNY0 202 aa15.17■□□□□ 0.02
CLSTN1-205ENST00000477264 MFSD6LQ8IWD5 586 aa15.17■□□□□ 0.02
CLSTN1-205ENST00000477264 LGI2Q8N0V4 545 aa15.17■□□□□ 0.02
CLSTN1-205ENST00000477264 PJA1Q8NG27 643 aa15.17■□□□□ 0.02
CLSTN1-205ENST00000477264 LRCH3Q96II8 777 aa15.17■□□□□ 0.02
CLSTN1-205ENST00000477264 DACH2Q96NX9 599 aa15.17■□□□□ 0.02
CLSTN1-205ENST00000477264 PPP1R2P1Q96PQ5 205 aa15.17■□□□□ 0.02
CLSTN1-205ENST00000477264 DGCR6LQ9BY27 220 aa15.17■□□□□ 0.02
CLSTN1-205ENST00000477264 OR2B2Q9GZK3 357 aa15.17■□□□□ 0.02
CLSTN1-205ENST00000477264 FAM49AQ9H0Q0 323 aaPredicted RBP15.17■□□□□ 0.02
CLSTN1-205ENST00000477264 AKTIPQ9H8T0 292 aa15.17■□□□□ 0.02
CLSTN1-205ENST00000477264 CYP4F12Q9HCS2 524 aa15.17■□□□□ 0.02
CLSTN1-205ENST00000477264 TMEM45AQ9NWC5 275 aa15.17■□□□□ 0.02
CLSTN1-205ENST00000477264 DPP3Q9NY33 737 aa15.17■□□□□ 0.02
CLSTN1-205ENST00000477264 SMIM35A0A1B0GVV1 85 aa15.16■□□□□ 0.02
CLSTN1-205ENST00000477264 B4GALT5O43286 388 aa15.16■□□□□ 0.02
CLSTN1-205ENST00000477264 FKTNO75072 461 aa15.16■□□□□ 0.02
CLSTN1-205ENST00000477264 PTTG1O95997 202 aa15.16■□□□□ 0.02
CLSTN1-205ENST00000477264 FGF4P08620 206 aa15.16■□□□□ 0.02
CLSTN1-205ENST00000477264 ARSAP15289 507 aa15.16■□□□□ 0.02
CLSTN1-205ENST00000477264 LBPP18428 481 aa15.16■□□□□ 0.02
CLSTN1-205ENST00000477264 PCMT1P22061 227 aa15.16■□□□□ 0.02
CLSTN1-205ENST00000477264 CCND3P30281 292 aaPredicted RBP15.16■□□□□ 0.02
CLSTN1-205ENST00000477264 EIF2DP41214 584 aaKnown RBP15.16■□□□□ 0.02
CLSTN1-205ENST00000477264 HCAR3P49019 387 aa15.16■□□□□ 0.02
CLSTN1-205ENST00000477264 ZNF135P52742 658 aaPredicted RBP15.16■□□□□ 0.02
CLSTN1-205ENST00000477264 CSHL1Q14406 222 aa15.16■□□□□ 0.02
CLSTN1-205ENST00000477264 SLC14A2Q15849 920 aa15.16■□□□□ 0.02
CLSTN1-205ENST00000477264 LRIT3Q3SXY7 679 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms