RNA–Protein interactions for RNA: ENST00000476590.1

CD55-208, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 1 (best)

Gene CD55, Length 2,163 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-208ENST00000476590 FUBP1Q96AE4 644 aaKnown RBP4.13□□□□□ -1.75
CD55-208ENST00000476590 C18orf25Q96B23 403 aaPredicted RBP4.13□□□□□ -1.75
CD55-208ENST00000476590 CHFRQ96EP1 664 aa4.13□□□□□ -1.75
CD55-208ENST00000476590 PGAP3Q96FM1 320 aaPredicted RBP4.13□□□□□ -1.75
CD55-208ENST00000476590 TMEM74Q96NL1 305 aa4.13□□□□□ -1.75
CD55-208ENST00000476590 DACH2Q96NX9 599 aa4.13□□□□□ -1.75
CD55-208ENST00000476590 FAM213AQ9BRX8 229 aa4.13□□□□□ -1.75
CD55-208ENST00000476590 TUBGCP2Q9BSJ2 902 aa4.13□□□□□ -1.75
CD55-208ENST00000476590 BDH2Q9BUT1 245 aa4.13□□□□□ -1.75
CD55-208ENST00000476590 UCK2Q9BZX2 261 aa4.13□□□□□ -1.75
CD55-208ENST00000476590 NMUR2Q9GZQ4 415 aa4.13□□□□□ -1.75
CD55-208ENST00000476590 TSPAN10Q9H1Z9 355 aaPredicted RBP4.13□□□□□ -1.75
CD55-208ENST00000476590 OR51M1Q9H341 326 aa4.13□□□□□ -1.75
CD55-208ENST00000476590 RNPEPQ9H4A4 650 aa4.13□□□□□ -1.75
CD55-208ENST00000476590 CRTAC1Q9NQ79 661 aa4.13□□□□□ -1.75
CD55-208ENST00000476590 RGS18Q9NS28 235 aa4.13□□□□□ -1.75
CD55-208ENST00000476590 SEMA3GQ9NS98 782 aa4.13□□□□□ -1.75
CD55-208ENST00000476590 ZNF358Q9NW07 568 aa4.13□□□□□ -1.75
CD55-208ENST00000476590 NKIRAS2Q9NYR9 191 aa4.13□□□□□ -1.75
CD55-208ENST00000476590 WWOXQ9NZC7 414 aa4.13□□□□□ -1.75
CD55-208ENST00000476590 GPN3Q9UHW5 284 aaPredicted RBP4.13□□□□□ -1.75
CD55-208ENST00000476590 SORCS3Q9UPU3 1222 aa4.13□□□□□ -1.75
CD55-208ENST00000476590 PTPN22Q9Y2R2 807 aa4.13□□□□□ -1.75
CD55-208ENST00000476590 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.13□□□□□ -1.75
CD55-208ENST00000476590 PARP4Q9UKK3 1724 aaKnown RBP4.13□□□□□ -1.75
CD55-208ENST00000476590 STK36Q9NRP7 1315 aa4.13□□□□□ -1.75
CD55-208ENST00000476590 MYH14Q7Z406 1995 aaKnown RBP4.13□□□□□ -1.75
CD55-208ENST00000476590 ADGRB1O14514 1584 aa4.13□□□□□ -1.75
CD55-208ENST00000476590 SAMD9LQ8IVG5 1584 aa4.13□□□□□ -1.75
CD55-208ENST00000476590 A0A0D9SFI3 127 aa4.13□□□□□ -1.75
CD55-208ENST00000476590 TRABD2BA6NFA1 517 aa4.13□□□□□ -1.75
CD55-208ENST00000476590 C2orf71A6NGG8 1288 aa4.13□□□□□ -1.75
CD55-208ENST00000476590 FIGNL2A6NMB9 653 aa4.13□□□□□ -1.75
CD55-208ENST00000476590 PRR5-ARHGAP8B1AHC4 643 aa4.13□□□□□ -1.75
CD55-208ENST00000476590 FZD9O00144 591 aa4.13□□□□□ -1.75
CD55-208ENST00000476590 TFECO14948 347 aaPredicted RBP4.13□□□□□ -1.75
CD55-208ENST00000476590 PER2O15055 1255 aa4.13□□□□□ -1.75
CD55-208ENST00000476590 KIAA0355O15063 1070 aa4.13□□□□□ -1.75
CD55-208ENST00000476590 THAP12O43422 761 aa4.13□□□□□ -1.75
CD55-208ENST00000476590 FOXO3O43524 673 aa4.13□□□□□ -1.75
CD55-208ENST00000476590 CALUO43852 315 aaPredicted RBP4.13□□□□□ -1.75
CD55-208ENST00000476590 MED24O75448 989 aa4.13□□□□□ -1.75
CD55-208ENST00000476590 TAF5LO75529 589 aa4.13□□□□□ -1.75
CD55-208ENST00000476590 IPO13O94829 963 aaKnown RBP4.13□□□□□ -1.75
CD55-208ENST00000476590 ACSL3O95573 720 aa4.13□□□□□ -1.75
CD55-208ENST00000476590 CPNE6O95741 557 aa4.13□□□□□ -1.75
CD55-208ENST00000476590 TTC4O95801 387 aa4.13□□□□□ -1.75
CD55-208ENST00000476590 POMCP01189 267 aa4.13□□□□□ -1.75
CD55-208ENST00000476590 CYP11A1P05108 521 aa4.13□□□□□ -1.75
CD55-208ENST00000476590 FCER2P06734 321 aa4.13□□□□□ -1.75
CD55-208ENST00000476590 RBP1P09455 135 aa4.13□□□□□ -1.75
CD55-208ENST00000476590 ZNF865P0CJ78 1059 aaPredicted RBP4.13□□□□□ -1.75
CD55-208ENST00000476590 CYP2C8P10632 490 aa4.13□□□□□ -1.75
CD55-208ENST00000476590 BMP4P12644 408 aa4.13□□□□□ -1.75
CD55-208ENST00000476590 PRF1P14222 555 aa4.13□□□□□ -1.75
CD55-208ENST00000476590 JUPP14923 745 aa4.13□□□□□ -1.75
CD55-208ENST00000476590 ZNF30P17039 623 aa4.13□□□□□ -1.75
CD55-208ENST00000476590 JUNBP17275 347 aaPredicted RBP4.13□□□□□ -1.75
CD55-208ENST00000476590 ARF4P18085 180 aaPredicted RBP4.13□□□□□ -1.75
CD55-208ENST00000476590 KRT15P19012 456 aa4.13□□□□□ -1.75
CD55-208ENST00000476590 TNNI3P19429 210 aa4.13□□□□□ -1.75
CD55-208ENST00000476590 CA4P22748 312 aa4.13□□□□□ -1.75
CD55-208ENST00000476590 GCAP28676 217 aa4.13□□□□□ -1.75
CD55-208ENST00000476590 PDHA2P29803 388 aa4.13□□□□□ -1.75
CD55-208ENST00000476590 CRHR1P34998 444 aa4.13□□□□□ -1.75
CD55-208ENST00000476590 BUD31P41223 144 aaPredicted RBP4.13□□□□□ -1.75
CD55-208ENST00000476590 HNF4AP41235 474 aa4.13□□□□□ -1.75
CD55-208ENST00000476590 GRM5P41594 1212 aa4.13□□□□□ -1.75
CD55-208ENST00000476590 AFMP43652 599 aa4.13□□□□□ -1.75
CD55-208ENST00000476590 RPL21P46778 160 aaKnown RBP4.13□□□□□ -1.75
CD55-208ENST00000476590 OR1G1P47890 313 aa4.13□□□□□ -1.75
CD55-208ENST00000476590 GIPRP48546 466 aa4.13□□□□□ -1.75
CD55-208ENST00000476590 CPT1AP50416 773 aa4.13□□□□□ -1.75
CD55-208ENST00000476590 PPIL2Q13356 520 aa4.13□□□□□ -1.75
CD55-208ENST00000476590 SLC12A1Q13621 1099 aa4.13□□□□□ -1.75
CD55-208ENST00000476590 TARBP2Q15633 366 aaKnown RBP4.13□□□□□ -1.75
CD55-208ENST00000476590 SMAD2Q15796 467 aaKnown RBP4.13□□□□□ -1.75
CD55-208ENST00000476590 TMEM44Q2T9K0 475 aa4.13□□□□□ -1.75
CD55-208ENST00000476590 SEZ6Q53EL9 994 aa4.13□□□□□ -1.75
CD55-208ENST00000476590 SAPCD1Q5SSQ6 148 aa4.13□□□□□ -1.75
CD55-208ENST00000476590 YOD1Q5VVQ6 348 aaPredicted RBP4.13□□□□□ -1.75
CD55-208ENST00000476590 TFAP2DQ7Z6R9 452 aa4.13□□□□□ -1.75
CD55-208ENST00000476590 PRPF39Q86UA1 669 aaKnown RBP4.13□□□□□ -1.75
CD55-208ENST00000476590 ZDHHC13Q8IUH4 622 aa4.13□□□□□ -1.75
CD55-208ENST00000476590 MAP4K3Q8IVH8 894 aa4.13□□□□□ -1.75
CD55-208ENST00000476590 SCML4Q8N228 414 aa4.13□□□□□ -1.75
CD55-208ENST00000476590 TDRD5Q8NAT2 981 aaKnown RBP4.13□□□□□ -1.75
CD55-208ENST00000476590 CLRN3Q8NCR9 226 aa4.13□□□□□ -1.75
CD55-208ENST00000476590 BEST2Q8NFU1 509 aa4.13□□□□□ -1.75
CD55-208ENST00000476590 OR2T3Q8NH03 318 aa4.13□□□□□ -1.75
CD55-208ENST00000476590 ZNF461Q8TAF7 563 aa4.13□□□□□ -1.75
CD55-208ENST00000476590 NANPQ8TBE9 248 aa4.13□□□□□ -1.75
CD55-208ENST00000476590 POC1BQ8TC44 478 aa4.13□□□□□ -1.75
CD55-208ENST00000476590 BLOC1S5Q8TDH9 187 aa4.13□□□□□ -1.75
CD55-208ENST00000476590 TSPEARQ8WU66 669 aa4.13□□□□□ -1.75
CD55-208ENST00000476590 PDCD6IPQ8WUM4 868 aaKnown RBP4.13□□□□□ -1.75
CD55-208ENST00000476590 DEDD2Q8WXF8 326 aa4.13□□□□□ -1.75
CD55-208ENST00000476590 KCTD13Q8WZ19 329 aa4.13□□□□□ -1.75
CD55-208ENST00000476590 CD101Q93033 1021 aa4.13□□□□□ -1.75
CD55-208ENST00000476590 PHKBQ93100 1093 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms