RNA–Protein interactions for RNA: ENST00000475218.2

UPF3A-204, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 1 (best)

Gene UPF3A, Length 1,791 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-204ENST00000475218 SQSTM1Q13501 440 aa13.96□□□□□ -0.17
UPF3A-204ENST00000475218 LRP8Q14114 963 aa13.96□□□□□ -0.17
UPF3A-204ENST00000475218 TFDP2Q14188 446 aa13.96□□□□□ -0.17
UPF3A-204ENST00000475218 TGIF1Q15583 401 aa13.96□□□□□ -0.17
UPF3A-204ENST00000475218 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.96□□□□□ -0.17
UPF3A-204ENST00000475218 RAD9BQ6WBX8 426 aa13.96□□□□□ -0.17
UPF3A-204ENST00000475218 ZC3H18Q86VM9 953 aaKnown RBP13.96□□□□□ -0.17
UPF3A-204ENST00000475218 ZNF761Q86XN6 746 aaPredicted RBP13.96□□□□□ -0.17
UPF3A-204ENST00000475218 ZNF567Q8N184 647 aa13.96□□□□□ -0.17
UPF3A-204ENST00000475218 TFB1MQ8WVM0 346 aaKnown RBP13.96□□□□□ -0.17
UPF3A-204ENST00000475218 C10orf88Q9H8K7 445 aa13.96□□□□□ -0.17
UPF3A-204ENST00000475218 PISDQ9UG56 409 aa13.96□□□□□ -0.17
UPF3A-204ENST00000475218 ZNHIT2Q9UHR6 403 aa13.96□□□□□ -0.17
UPF3A-204ENST00000475218 KCNK6Q9Y257 313 aa13.96□□□□□ -0.17
UPF3A-204ENST00000475218 PRR19A6NJB7 356 aa13.96□□□□□ -0.18
UPF3A-204ENST00000475218 F5H423 210 aaPredicted RBP13.96□□□□□ -0.18
UPF3A-204ENST00000475218 NUAK1O60285 661 aa13.96□□□□□ -0.18
UPF3A-204ENST00000475218 SLC4A1P02730 911 aa13.96□□□□□ -0.18
UPF3A-204ENST00000475218 CCL4P13236 92 aa13.96□□□□□ -0.18
UPF3A-204ENST00000475218 CA5AP35218 305 aa13.96□□□□□ -0.18
UPF3A-204ENST00000475218 WNT3AP56704 352 aa13.96□□□□□ -0.18
UPF3A-204ENST00000475218 TMPRSS3P57727 454 aa13.96□□□□□ -0.18
UPF3A-204ENST00000475218 MAP9Q49MG5 647 aa13.96□□□□□ -0.18
UPF3A-204ENST00000475218 ARHGAP40Q5TG30 622 aa13.96□□□□□ -0.18
UPF3A-204ENST00000475218 CHST15Q7LFX5 561 aaPredicted RBP13.96□□□□□ -0.18
UPF3A-204ENST00000475218 ADGRG6Q86SQ4 1221 aa13.96□□□□□ -0.18
UPF3A-204ENST00000475218 PIM3Q86V86 326 aa13.96□□□□□ -0.18
UPF3A-204ENST00000475218 TTC30BQ8N4P2 665 aa13.96□□□□□ -0.18
UPF3A-204ENST00000475218 RCBTB1Q8NDN9 531 aa13.96□□□□□ -0.18
UPF3A-204ENST00000475218 CCHCR1Q8TD31 782 aa13.96□□□□□ -0.18
UPF3A-204ENST00000475218 PMEPA1Q969W9 287 aa13.96□□□□□ -0.18
UPF3A-204ENST00000475218 MRFAP1L1Q96HT8 127 aa13.96□□□□□ -0.18
UPF3A-204ENST00000475218 MRGPRX2Q96LB1 330 aa13.96□□□□□ -0.18
UPF3A-204ENST00000475218 QKIQ96PU8 341 aaKnown RBP eCLIP13.96□□□□□ -0.18
UPF3A-204ENST00000475218 PANX2Q96RD6 677 aa13.96□□□□□ -0.18
UPF3A-204ENST00000475218 LACRTQ9GZZ8 138 aa13.96□□□□□ -0.18
UPF3A-204ENST00000475218 FOXJ2Q9P0K8 574 aa13.96□□□□□ -0.18
UPF3A-204ENST00000475218 SLC23A2Q9UGH3 650 aa13.96□□□□□ -0.18
UPF3A-204ENST00000475218 PRAMEF33A0A0G2JMD5 474 aa13.95□□□□□ -0.18
UPF3A-204ENST00000475218 TEX51A0A1B0GUA7 166 aa13.95□□□□□ -0.18
UPF3A-204ENST00000475218 NVLO15381 856 aaKnown RBP13.95□□□□□ -0.18
UPF3A-204ENST00000475218 PRAMEF10O60809 474 aa13.95□□□□□ -0.18
UPF3A-204ENST00000475218 ZRANB2O95218 330 aaKnown RBP eCLIP13.95□□□□□ -0.18
UPF3A-204ENST00000475218 NDUFA10O95299 355 aa13.95□□□□□ -0.18
UPF3A-204ENST00000475218 ACP5P13686 325 aa13.95□□□□□ -0.18
UPF3A-204ENST00000475218 PHF19Q5T6S3 580 aa13.95□□□□□ -0.18
UPF3A-204ENST00000475218 IYDQ6PHW0 289 aa13.95□□□□□ -0.18
UPF3A-204ENST00000475218 BBS12Q6ZW61 710 aa13.95□□□□□ -0.18
UPF3A-204ENST00000475218 ZNF547Q8IVP9 402 aa13.95□□□□□ -0.18
UPF3A-204ENST00000475218 RCOR2Q8IZ40 523 aa13.95□□□□□ -0.18
UPF3A-204ENST00000475218 TRAM1L1Q8N609 369 aa13.95□□□□□ -0.18
UPF3A-204ENST00000475218 CCDC74BQ96LY2 380 aa13.95□□□□□ -0.18
UPF3A-204ENST00000475218 HEMGNQ9BXL5 484 aa13.95□□□□□ -0.18
UPF3A-204ENST00000475218 CARD9Q9H257 536 aa13.95□□□□□ -0.18
UPF3A-204ENST00000475218 EPN1Q9Y6I3 576 aaPredicted RBP13.95□□□□□ -0.18
UPF3A-204ENST00000475218 K7ENP7 123 aa13.94□□□□□ -0.18
UPF3A-204ENST00000475218 CHUKO15111 745 aa13.94□□□□□ -0.18
UPF3A-204ENST00000475218 GRID2O43424 1007 aa13.94□□□□□ -0.18
UPF3A-204ENST00000475218 JMJD7P0C870 316 aa13.94□□□□□ -0.18
UPF3A-204ENST00000475218 MPSTP25325 297 aa13.94□□□□□ -0.18
UPF3A-204ENST00000475218 CTNNA1P35221 906 aaKnown RBP13.94□□□□□ -0.18
UPF3A-204ENST00000475218 LIMK2P53671 638 aa13.94□□□□□ -0.18
UPF3A-204ENST00000475218 VAC14Q08AM6 782 aa13.94□□□□□ -0.18
UPF3A-204ENST00000475218 PPP2R5EQ16537 467 aa13.94□□□□□ -0.18
UPF3A-204ENST00000475218 SIRPB2Q5JXA9 342 aa13.94□□□□□ -0.18
UPF3A-204ENST00000475218 INO80CQ6PI98 192 aaPredicted RBP13.94□□□□□ -0.18
UPF3A-204ENST00000475218 TMEM139Q8IV31 216 aa13.94□□□□□ -0.18
UPF3A-204ENST00000475218 P3H4Q92791 437 aa13.94□□□□□ -0.18
UPF3A-204ENST00000475218 USP7Q93009 1102 aa13.94□□□□□ -0.18
UPF3A-204ENST00000475218 GLYATL1Q969I3 302 aa13.94□□□□□ -0.18
UPF3A-204ENST00000475218 SPATA16Q9BXB7 569 aa13.94□□□□□ -0.18
UPF3A-204ENST00000475218 OR2AG1Q9H205 316 aa13.94□□□□□ -0.18
UPF3A-204ENST00000475218 RMI1Q9H9A7 625 aa13.94□□□□□ -0.18
UPF3A-204ENST00000475218 SCHIP1Q9P0W5 487 aaPredicted RBP13.94□□□□□ -0.18
UPF3A-204ENST00000475218 PDP2Q9P2J9 529 aa13.94□□□□□ -0.18
UPF3A-204ENST00000475218 FAM153AQ9UHL3 310 aa13.94□□□□□ -0.18
UPF3A-204ENST00000475218 SDK2Q58EX2 2172 aa13.94□□□□□ -0.18
UPF3A-204ENST00000475218 A0A0U1RQJ8 604 aa13.94□□□□□ -0.18
UPF3A-204ENST00000475218 GAPDHSO14556 408 aaPredicted RBP13.94□□□□□ -0.18
UPF3A-204ENST00000475218 GPR39O43194 453 aa13.94□□□□□ -0.18
UPF3A-204ENST00000475218 MTX2O75431 263 aa13.94□□□□□ -0.18
UPF3A-204ENST00000475218 THRAP10827 490 aa13.94□□□□□ -0.18
UPF3A-204ENST00000475218 FGF3P11487 239 aaPredicted RBP13.94□□□□□ -0.18
UPF3A-204ENST00000475218 UCNP55089 124 aa13.94□□□□□ -0.18
UPF3A-204ENST00000475218 CLPPQ16740 277 aaPredicted RBP13.94□□□□□ -0.18
UPF3A-204ENST00000475218 ODF2Q5BJF6 829 aa13.94□□□□□ -0.18
UPF3A-204ENST00000475218 ZNF569Q5MCW4 686 aa13.94□□□□□ -0.18
UPF3A-204ENST00000475218 BROXQ5VW32 411 aa13.94□□□□□ -0.18
UPF3A-204ENST00000475218 AADACL2Q6P093 401 aa13.94□□□□□ -0.18
UPF3A-204ENST00000475218 BZW1Q7L1Q6 419 aaKnown RBP13.94□□□□□ -0.18
UPF3A-204ENST00000475218 DAAM2Q86T65 1068 aa13.94□□□□□ -0.18
UPF3A-204ENST00000475218 JAMLQ86YT9 394 aa13.94□□□□□ -0.18
UPF3A-204ENST00000475218 LRRC57Q8N9N7 239 aa13.94□□□□□ -0.18
UPF3A-204ENST00000475218 OR4D9Q8NGE8 314 aa13.94□□□□□ -0.18
UPF3A-204ENST00000475218 HTR3CQ8WXA8 447 aa13.94□□□□□ -0.18
UPF3A-204ENST00000475218 SLC39A7Q92504 469 aa13.94□□□□□ -0.18
UPF3A-204ENST00000475218 TTC9Q92623 222 aa13.94□□□□□ -0.18
UPF3A-204ENST00000475218 ALG3Q92685 438 aa13.94□□□□□ -0.18
UPF3A-204ENST00000475218 TMEM159Q96B96 161 aa13.94□□□□□ -0.18
UPF3A-204ENST00000475218 FCRL5Q96RD9 977 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms