RNA–Protein interactions for RNA: ENST00000474572.6

USP39-214, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 293 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-214ENST00000474572 POMPQ9Y244 141 aa9.74□□□□□ -0.85
USP39-214ENST00000474572 PLXNA2O75051 1894 aa9.74□□□□□ -0.85
USP39-214ENST00000474572 KIF26AQ9ULI4 1882 aaPredicted RBP9.74□□□□□ -0.85
USP39-214ENST00000474572 CEP350Q5VT06 3117 aa9.73□□□□□ -0.85
USP39-214ENST00000474572 A0A1W2PQ67 120 aa9.73□□□□□ -0.85
USP39-214ENST00000474572 NPEPPSL1A6NEC2 478 aa9.73□□□□□ -0.85
USP39-214ENST00000474572 LRRC14BA6NHZ5 514 aa9.73□□□□□ -0.85
USP39-214ENST00000474572 HIDE1A8MVS5 230 aa9.73□□□□□ -0.85
USP39-214ENST00000474572 SUPT3HB4E1H0 165 aa9.73□□□□□ -0.85
USP39-214ENST00000474572 WASH3PC4AMC7 463 aa9.73□□□□□ -0.85
USP39-214ENST00000474572 C5orf67F2Z3F1 127 aa9.73□□□□□ -0.85
USP39-214ENST00000474572 AZIN1O14977 448 aa9.73□□□□□ -0.85
USP39-214ENST00000474572 GRM6O15303 877 aa9.73□□□□□ -0.85
USP39-214ENST00000474572 CCL16O15467 120 aa9.73□□□□□ -0.85
USP39-214ENST00000474572 OR1I1O60431 355 aa9.73□□□□□ -0.85
USP39-214ENST00000474572 CLASP2O75122 1294 aaKnown RBP9.73□□□□□ -0.85
USP39-214ENST00000474572 SUPT3HO75486 399 aa9.73□□□□□ -0.85
USP39-214ENST00000474572 SIX3O95343 332 aaPredicted RBP9.73□□□□□ -0.85
USP39-214ENST00000474572 PRR35P0CG20 571 aa9.73□□□□□ -0.85
USP39-214ENST00000474572 ACADSP16219 412 aa9.73□□□□□ -0.85
USP39-214ENST00000474572 ZNF7P17097 686 aaPredicted RBP9.73□□□□□ -0.85
USP39-214ENST00000474572 PTPN2P17706 415 aa9.73□□□□□ -0.85
USP39-214ENST00000474572 CTPS1P17812 591 aa9.73□□□□□ -0.85
USP39-214ENST00000474572 SERPINA4P29622 427 aa9.73□□□□□ -0.85
USP39-214ENST00000474572 EEF1DP29692 281 aaKnown RBP9.73□□□□□ -0.85
USP39-214ENST00000474572 SPAM1P38567 509 aa9.73□□□□□ -0.85
USP39-214ENST00000474572 VASPP50552 380 aaPredicted RBP9.73□□□□□ -0.85
USP39-214ENST00000474572 NUDT2P50583 147 aa9.73□□□□□ -0.85
USP39-214ENST00000474572 HK3P52790 923 aa9.73□□□□□ -0.85
USP39-214ENST00000474572 IL2P60568 153 aa9.73□□□□□ -0.85
USP39-214ENST00000474572 SNRPD1P62314 119 aaKnown RBP9.73□□□□□ -0.85
USP39-214ENST00000474572 CLCQ05315 142 aa9.73□□□□□ -0.85
USP39-214ENST00000474572 LCP2Q13094 533 aa9.73□□□□□ -0.85
USP39-214ENST00000474572 CCNIQ14094 377 aa9.73□□□□□ -0.85
USP39-214ENST00000474572 DMC1Q14565 340 aa9.73□□□□□ -0.85
USP39-214ENST00000474572 CRY1Q16526 586 aa9.73□□□□□ -0.85
USP39-214ENST00000474572 PFKFB4Q16877 469 aa9.73□□□□□ -0.85
USP39-214ENST00000474572 GPR33Q49SQ1 333 aa9.73□□□□□ -0.85
USP39-214ENST00000474572 PIGGQ5H8A4 983 aa9.73□□□□□ -0.85
USP39-214ENST00000474572 PRSS36Q5K4E3 855 aa9.73□□□□□ -0.85
USP39-214ENST00000474572 DGKKQ5KSL6 1271 aa9.73□□□□□ -0.85
USP39-214ENST00000474572 C1orf146Q5VVC0 180 aa9.73□□□□□ -0.85
USP39-214ENST00000474572 ANKS6Q68DC2 871 aa9.73□□□□□ -0.85
USP39-214ENST00000474572 NXNQ6DKJ4 435 aa9.73□□□□□ -0.85
USP39-214ENST00000474572 ASTLQ6HA08 431 aaPredicted RBP9.73□□□□□ -0.85
USP39-214ENST00000474572 C8orf82Q6P1X6 216 aaPredicted RBP9.73□□□□□ -0.85
USP39-214ENST00000474572 LRRC74BQ6ZQY2 392 aa9.73□□□□□ -0.85
USP39-214ENST00000474572 TPGS1Q6ZTW0 290 aa9.73□□□□□ -0.85
USP39-214ENST00000474572 SERPINA9Q86WD7 417 aa9.73□□□□□ -0.85
USP39-214ENST00000474572 CPNE9Q8IYJ1 553 aa9.73□□□□□ -0.85
USP39-214ENST00000474572 DSELQ8IZU8 1212 aa9.73□□□□□ -0.85
USP39-214ENST00000474572 CMTM8Q8IZV2 173 aa9.73□□□□□ -0.85
USP39-214ENST00000474572 RBFAQ8N0V3 343 aa9.73□□□□□ -0.85
USP39-214ENST00000474572 RYBPQ8N488 228 aaPredicted RBP9.73□□□□□ -0.85
USP39-214ENST00000474572 PCDH20Q8N6Y1 951 aaKnown RBP9.73□□□□□ -0.85
USP39-214ENST00000474572 KIAA1958Q8N8K9 716 aa9.73□□□□□ -0.85
USP39-214ENST00000474572 SIDT2Q8NBJ9 832 aaKnown RBP9.73□□□□□ -0.85
USP39-214ENST00000474572 PHOSPHO2Q8TCD6 241 aa9.73□□□□□ -0.85
USP39-214ENST00000474572 SPPL3Q8TCT6 385 aa9.73□□□□□ -0.85
USP39-214ENST00000474572 NRG4Q8WWG1 115 aa9.73□□□□□ -0.85
USP39-214ENST00000474572 RCN3Q96D15 328 aa9.73□□□□□ -0.85
USP39-214ENST00000474572 C19orf60Q96EN9 201 aa9.73□□□□□ -0.85
USP39-214ENST00000474572 PPP1R36Q96LQ0 422 aa9.73□□□□□ -0.85
USP39-214ENST00000474572 RAD9AQ99638 391 aa9.73□□□□□ -0.85
USP39-214ENST00000474572 NUSAP1Q9BXS6 441 aaKnown RBP9.73□□□□□ -0.85
USP39-214ENST00000474572 LATS2Q9NRM7 1088 aa9.73□□□□□ -0.85
USP39-214ENST00000474572 HCFC1R1Q9NWW0 138 aa9.73□□□□□ -0.85
USP39-214ENST00000474572 NUDT4Q9NZJ9 180 aa9.73□□□□□ -0.85
USP39-214ENST00000474572 ZMYM5Q9UJ78 669 aa9.73□□□□□ -0.85
USP39-214ENST00000474572 PCTPQ9UKL6 214 aa9.73□□□□□ -0.85
USP39-214ENST00000474572 DNAJC15Q9Y5T4 150 aa9.73□□□□□ -0.85
USP39-214ENST00000474572 ST14Q9Y5Y6 855 aa9.73□□□□□ -0.85
USP39-214ENST00000474572 ATG2AQ2TAZ0 1938 aa9.73□□□□□ -0.85
USP39-214ENST00000474572 BRCA2P51587 3418 aa9.73□□□□□ -0.85
USP39-214ENST00000474572 MUC22E2RYF6 1773 aaPredicted RBP9.73□□□□□ -0.85
USP39-214ENST00000474572 A0A0U1RQS6 177 aa9.72□□□□□ -0.85
USP39-214ENST00000474572 C1orf232A0A0U1RR37 186 aa9.72□□□□□ -0.85
USP39-214ENST00000474572 GOLGA8CPA6NN73 597 aa9.72□□□□□ -0.85
USP39-214ENST00000474572 ZBBXA8MT70 800 aa9.72□□□□□ -0.85
USP39-214ENST00000474572 BTN3A1O00481 513 aa9.72□□□□□ -0.85
USP39-214ENST00000474572 UBDO15205 165 aa9.72□□□□□ -0.85
USP39-214ENST00000474572 PAPLNO95428 1278 aa9.72□□□□□ -0.85
USP39-214ENST00000474572 PRAMEF1O95521 474 aa9.72□□□□□ -0.85
USP39-214ENST00000474572 HNRNPA1P09651 372 aaKnown RBP eCLIP9.72□□□□□ -0.85
USP39-214ENST00000474572 ALDOCP09972 364 aaKnown RBP9.72□□□□□ -0.85
USP39-214ENST00000474572 BMP1P13497 986 aa9.72□□□□□ -0.85
USP39-214ENST00000474572 GFAPP14136 432 aa9.72□□□□□ -0.85
USP39-214ENST00000474572 ANPEPP15144 967 aa9.72□□□□□ -0.85
USP39-214ENST00000474572 BPIP17213 487 aa9.72□□□□□ -0.85
USP39-214ENST00000474572 ITGALP20701 1170 aa9.72□□□□□ -0.85
USP39-214ENST00000474572 ATP6V1C1P21283 382 aa9.72□□□□□ -0.85
USP39-214ENST00000474572 ACRV1P26436 265 aa9.72□□□□□ -0.85
USP39-214ENST00000474572 GKP32189 559 aa9.72□□□□□ -0.85
USP39-214ENST00000474572 CA5AP35218 305 aa9.72□□□□□ -0.85
USP39-214ENST00000474572 CA8P35219 290 aa9.72□□□□□ -0.85
USP39-214ENST00000474572 HNF1BP35680 557 aa9.72□□□□□ -0.85
USP39-214ENST00000474572 DPP6P42658 865 aa9.72□□□□□ -0.85
USP39-214ENST00000474572 CTSOP43234 321 aaPredicted RBP9.72□□□□□ -0.85
USP39-214ENST00000474572 CDH13P55290 713 aa9.72□□□□□ -0.85
USP39-214ENST00000474572 AP2B1P63010 937 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms