RNA–Protein interactions for RNA: ENST00000471968.1

HDAC3-206, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-206ENST00000471968 FOLR3P41439 243 aa6.45□□□□□ -1.38
HDAC3-206ENST00000471968 CASP4P49662 377 aa6.45□□□□□ -1.38
HDAC3-206ENST00000471968 ARL4DP49703 201 aa6.45□□□□□ -1.38
HDAC3-206ENST00000471968 FOXL2P58012 376 aa6.45□□□□□ -1.38
HDAC3-206ENST00000471968 HSF1Q00613 529 aa6.45□□□□□ -1.38
HDAC3-206ENST00000471968 CYP24A1Q07973 514 aa6.45□□□□□ -1.38
HDAC3-206ENST00000471968 ELP6Q0PNE2 266 aa6.45□□□□□ -1.38
HDAC3-206ENST00000471968 INCA1Q0VD86 236 aa6.45□□□□□ -1.38
HDAC3-206ENST00000471968 ZFYVE27Q5T4F4 411 aa6.45□□□□□ -1.38
HDAC3-206ENST00000471968 MLIPQ5VWP3 458 aa6.45□□□□□ -1.38
HDAC3-206ENST00000471968 KIAA0930Q6ICG6 404 aaPredicted RBP6.45□□□□□ -1.38
HDAC3-206ENST00000471968 RETSATQ6NUM9 610 aa6.45□□□□□ -1.38
HDAC3-206ENST00000471968 DOK6Q6PKX4 331 aa6.45□□□□□ -1.38
HDAC3-206ENST00000471968 DTHD1Q6ZMT9 781 aa6.45□□□□□ -1.38
HDAC3-206ENST00000471968 TAC4Q86UU9 113 aa6.45□□□□□ -1.38
HDAC3-206ENST00000471968 NLRP8Q86W28 1048 aa6.45□□□□□ -1.38
HDAC3-206ENST00000471968 MEX3DQ86XN8 651 aaKnown RBP6.45□□□□□ -1.38
HDAC3-206ENST00000471968 RSC1A1Q92681 617 aa6.45□□□□□ -1.38
HDAC3-206ENST00000471968 VOPP1Q96AW1 172 aa6.45□□□□□ -1.38
HDAC3-206ENST00000471968 RNF25Q96BH1 459 aaPredicted RBP6.45□□□□□ -1.38
HDAC3-206ENST00000471968 THOC3Q96J01 351 aaKnown RBP6.45□□□□□ -1.38
HDAC3-206ENST00000471968 OR2M4Q96R27 311 aa6.45□□□□□ -1.38
HDAC3-206ENST00000471968 LMF1Q96S06 567 aa6.45□□□□□ -1.38
HDAC3-206ENST00000471968 KCTD15Q96SI1 283 aaPredicted RBP6.45□□□□□ -1.38
HDAC3-206ENST00000471968 OSBPL1AQ9BXW6 950 aa6.45□□□□□ -1.38
HDAC3-206ENST00000471968 FRMD8Q9BZ67 464 aaPredicted RBP6.45□□□□□ -1.38
HDAC3-206ENST00000471968 TTYH3Q9C0H2 523 aa6.45□□□□□ -1.38
HDAC3-206ENST00000471968 KCND1Q9NSA2 647 aa6.45□□□□□ -1.38
HDAC3-206ENST00000471968 SAMSN1Q9NSI8 373 aaKnown RBP6.45□□□□□ -1.38
HDAC3-206ENST00000471968 PCMTD2Q9NV79 361 aa6.45□□□□□ -1.38
HDAC3-206ENST00000471968 VANGL2Q9ULK5 521 aa6.45□□□□□ -1.38
HDAC3-206ENST00000471968 DNAJC16Q9Y2G8 782 aa6.45□□□□□ -1.38
HDAC3-206ENST00000471968 DOCK10Q96BY6 2186 aa6.44□□□□□ -1.38
HDAC3-206ENST00000471968 A8MV72 311 aaPredicted RBP6.44□□□□□ -1.38
HDAC3-206ENST00000471968 KCNU1A8MYU2 1149 aa6.44□□□□□ -1.38
HDAC3-206ENST00000471968 NPIPA5E9PKD4 350 aa6.44□□□□□ -1.38
HDAC3-206ENST00000471968 IKBKBO14920 756 aa6.44□□□□□ -1.38
HDAC3-206ENST00000471968 XPO1O14980 1071 aaKnown RBP6.44□□□□□ -1.38
HDAC3-206ENST00000471968 TGFB1I1O43294 461 aa6.44□□□□□ -1.38
HDAC3-206ENST00000471968 ZRANB2O95218 330 aaKnown RBP eCLIP6.44□□□□□ -1.38
HDAC3-206ENST00000471968 CTDNEP1O95476 244 aa6.44□□□□□ -1.38
HDAC3-206ENST00000471968 VNN1O95497 513 aa6.44□□□□□ -1.38
HDAC3-206ENST00000471968 VSIG8P0DPA2 414 aa6.44□□□□□ -1.38
HDAC3-206ENST00000471968 FDPSP14324 419 aaKnown RBP6.44□□□□□ -1.38
HDAC3-206ENST00000471968 MARSP56192 900 aaKnown RBP6.44□□□□□ -1.38
HDAC3-206ENST00000471968 TUBB4BP68371 445 aa6.44□□□□□ -1.38
HDAC3-206ENST00000471968 CACNG1Q06432 222 aa6.44□□□□□ -1.38
HDAC3-206ENST00000471968 TUBB2AQ13885 445 aa6.44□□□□□ -1.38
HDAC3-206ENST00000471968 GPR19Q15760 415 aa6.44□□□□□ -1.38
HDAC3-206ENST00000471968 PLA2G4EQ3MJ16 856 aa6.44□□□□□ -1.38
HDAC3-206ENST00000471968 KRTCAP3Q53RY4 240 aa6.44□□□□□ -1.38
HDAC3-206ENST00000471968 PNCKQ6P2M8 343 aa6.44□□□□□ -1.38
HDAC3-206ENST00000471968 IYDQ6PHW0 289 aa6.44□□□□□ -1.38
HDAC3-206ENST00000471968 USP45Q70EL2 814 aa6.44□□□□□ -1.38
HDAC3-206ENST00000471968 C11orf96Q7Z7L8 435 aa6.44□□□□□ -1.38
HDAC3-206ENST00000471968 PAQR7Q86WK9 346 aa6.44□□□□□ -1.38
HDAC3-206ENST00000471968 ATP6V0D2Q8N8Y2 350 aa6.44□□□□□ -1.38
HDAC3-206ENST00000471968 ANKRD52Q8NB46 1076 aa6.44□□□□□ -1.38
HDAC3-206ENST00000471968 OR7D4Q8NG98 312 aa6.44□□□□□ -1.38
HDAC3-206ENST00000471968 CLEC4CQ8WTT0 213 aa6.44□□□□□ -1.38
HDAC3-206ENST00000471968 RND1Q92730 232 aa6.44□□□□□ -1.38
HDAC3-206ENST00000471968 ZDHHC12Q96GR4 267 aa6.44□□□□□ -1.38
HDAC3-206ENST00000471968 SLC41A2Q96JW4 573 aa6.44□□□□□ -1.38
HDAC3-206ENST00000471968 DHRS4Q9BTZ2 278 aa6.44□□□□□ -1.38
HDAC3-206ENST00000471968 SPON2Q9BUD6 331 aa6.44□□□□□ -1.38
HDAC3-206ENST00000471968 TUBB2BQ9BVA1 445 aa6.44□□□□□ -1.38
HDAC3-206ENST00000471968 FGFBP2Q9BYJ0 223 aa6.44□□□□□ -1.38
HDAC3-206ENST00000471968 RWDD1Q9H446 243 aaPredicted RBP6.44□□□□□ -1.38
HDAC3-206ENST00000471968 CUEDC2Q9H467 287 aa6.44□□□□□ -1.38
HDAC3-206ENST00000471968 KIAA1586Q9HCI6 787 aa6.44□□□□□ -1.38
HDAC3-206ENST00000471968 PCDH12Q9NPG4 1184 aa6.44□□□□□ -1.38
HDAC3-206ENST00000471968 CNGB3Q9NQW8 809 aa6.44□□□□□ -1.38
HDAC3-206ENST00000471968 PHPT1Q9NRX4 125 aaPredicted RBP6.44□□□□□ -1.38
HDAC3-206ENST00000471968 PPP4R2Q9NY27 417 aa6.44□□□□□ -1.38
HDAC3-206ENST00000471968 CPNE7Q9UBL6 633 aa6.44□□□□□ -1.38
HDAC3-206ENST00000471968 NPIPA1Q9UND3 350 aa6.44□□□□□ -1.38
HDAC3-206ENST00000471968 MTMR6Q9Y217 621 aa6.44□□□□□ -1.38
HDAC3-206ENST00000471968 MBD3L4A6NDZ8 208 aaPredicted RBP6.43□□□□□ -1.38
HDAC3-206ENST00000471968 MBD3L5A6NJ08 208 aaPredicted RBP6.43□□□□□ -1.38
HDAC3-206ENST00000471968 CD5LO43866 347 aa6.43□□□□□ -1.38
HDAC3-206ENST00000471968 SNX2O60749 519 aa6.43□□□□□ -1.38
HDAC3-206ENST00000471968 SHOX2O60902 331 aaPredicted RBP6.43□□□□□ -1.38
HDAC3-206ENST00000471968 POP4O95707 220 aaKnown RBP6.43□□□□□ -1.38
HDAC3-206ENST00000471968 MLYCDO95822 493 aa6.43□□□□□ -1.38
HDAC3-206ENST00000471968 JCHAINP01591 159 aa6.43□□□□□ -1.38
HDAC3-206ENST00000471968 IGHDP01880 384 aa6.43□□□□□ -1.38
HDAC3-206ENST00000471968 IVLP07476 585 aa6.43□□□□□ -1.38
HDAC3-206ENST00000471968 CREB1P16220 341 aa6.43□□□□□ -1.38
HDAC3-206ENST00000471968 ETV3P41162 512 aa6.43□□□□□ -1.38
HDAC3-206ENST00000471968 CAPZBP47756 277 aa6.43□□□□□ -1.38
HDAC3-206ENST00000471968 CTSCP53634 463 aa6.43□□□□□ -1.38
HDAC3-206ENST00000471968 CDH4P55283 916 aa6.43□□□□□ -1.38
HDAC3-206ENST00000471968 PPP1CAP62136 330 aa6.43□□□□□ -1.38
HDAC3-206ENST00000471968 ARF5P84085 180 aa6.43□□□□□ -1.38
HDAC3-206ENST00000471968 GUCY1B3Q02153 619 aa6.43□□□□□ -1.38
HDAC3-206ENST00000471968 ABRQ12979 859 aa6.43□□□□□ -1.38
HDAC3-206ENST00000471968 OLIG2Q13516 323 aa6.43□□□□□ -1.38
HDAC3-206ENST00000471968 AUHQ13825 339 aaKnown RBP6.43□□□□□ -1.38
HDAC3-206ENST00000471968 SGSM1Q2NKQ1 1148 aa6.43□□□□□ -1.38
HDAC3-206ENST00000471968 GOLGA7BQ2TAP0 167 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms