RNA–Protein interactions for RNA: ENST00000471037.1

SF3A1-206, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 3

Gene SF3A1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-206ENST00000471037 GARSP41250 739 aaKnown RBP9.04□□□□□ -0.96
SF3A1-206ENST00000471037 RGRP47804 291 aa9.04□□□□□ -0.96
SF3A1-206ENST00000471037 ATP5OP48047 213 aa9.04□□□□□ -0.96
SF3A1-206ENST00000471037 MAPK10P53779 464 aa9.04□□□□□ -0.96
SF3A1-206ENST00000471037 POLR2LP62875 67 aaKnown RBP9.04□□□□□ -0.96
SF3A1-206ENST00000471037 SLC10A2Q12908 348 aaPredicted RBP9.04□□□□□ -0.96
SF3A1-206ENST00000471037 SNX1Q13596 522 aa9.04□□□□□ -0.96
SF3A1-206ENST00000471037 DHX34Q14147 1143 aaKnown RBP9.04□□□□□ -0.96
SF3A1-206ENST00000471037 C16orf72Q14CZ0 275 aa9.04□□□□□ -0.96
SF3A1-206ENST00000471037 OASLQ15646 514 aaKnown RBP9.04□□□□□ -0.96
SF3A1-206ENST00000471037 TBR1Q16650 682 aa9.04□□□□□ -0.96
SF3A1-206ENST00000471037 MAP9Q49MG5 647 aa9.04□□□□□ -0.96
SF3A1-206ENST00000471037 GLE1Q53GS7 698 aaKnown RBP9.04□□□□□ -0.96
SF3A1-206ENST00000471037 PHF19Q5T6S3 580 aa9.04□□□□□ -0.96
SF3A1-206ENST00000471037 TMEM164Q5U3C3 297 aa9.04□□□□□ -0.96
SF3A1-206ENST00000471037 CCDC137Q6PK04 289 aaKnown RBP9.04□□□□□ -0.96
SF3A1-206ENST00000471037 SYDE1Q6ZW31 735 aaPredicted RBP9.04□□□□□ -0.96
SF3A1-206ENST00000471037 MAATS1Q7Z4T9 603 aa9.04□□□□□ -0.96
SF3A1-206ENST00000471037 SRLQ86TD4 932 aa9.04□□□□□ -0.96
SF3A1-206ENST00000471037 PIM3Q86V86 326 aa9.04□□□□□ -0.96
SF3A1-206ENST00000471037 ARHGAP12Q8IWW6 846 aa9.04□□□□□ -0.96
SF3A1-206ENST00000471037 KLHL7Q8IXQ5 586 aa9.04□□□□□ -0.96
SF3A1-206ENST00000471037 TSEN2Q8NCE0 465 aaKnown RBP9.04□□□□□ -0.96
SF3A1-206ENST00000471037 CCL4L1Q8NHW4 92 aa9.04□□□□□ -0.96
SF3A1-206ENST00000471037 GPBAR1Q8TDU6 330 aa9.04□□□□□ -0.96
SF3A1-206ENST00000471037 TFB1MQ8WVM0 346 aaKnown RBP9.04□□□□□ -0.96
SF3A1-206ENST00000471037 HTR3CQ8WXA8 447 aa9.04□□□□□ -0.96
SF3A1-206ENST00000471037 SLCO2A1Q92959 643 aa9.04□□□□□ -0.96
SF3A1-206ENST00000471037 HDAC11Q96DB2 347 aa9.04□□□□□ -0.96
SF3A1-206ENST00000471037 TSGA13Q96PP4 275 aa9.04□□□□□ -0.96
SF3A1-206ENST00000471037 QKIQ96PU8 341 aaKnown RBP eCLIP9.04□□□□□ -0.96
SF3A1-206ENST00000471037 KRT12Q99456 494 aa9.04□□□□□ -0.96
SF3A1-206ENST00000471037 LGR4Q9BXB1 951 aa9.04□□□□□ -0.96
SF3A1-206ENST00000471037 SLC25A18Q9H1K4 315 aa9.04□□□□□ -0.96
SF3A1-206ENST00000471037 SEMA6CQ9H3T2 930 aa9.04□□□□□ -0.96
SF3A1-206ENST00000471037 DPEP2Q9H4A9 486 aa9.04□□□□□ -0.96
SF3A1-206ENST00000471037 WDR26Q9H7D7 661 aa9.04□□□□□ -0.96
SF3A1-206ENST00000471037 CYP4F12Q9HCS2 524 aa9.04□□□□□ -0.96
SF3A1-206ENST00000471037 GEMIN8Q9NWZ8 242 aaKnown RBP9.04□□□□□ -0.96
SF3A1-206ENST00000471037 AKAP7Q9P0M2 348 aaPredicted RBP9.04□□□□□ -0.96
SF3A1-206ENST00000471037 SAE1Q9UBE0 346 aaPredicted RBP9.04□□□□□ -0.96
SF3A1-206ENST00000471037 DNPEPQ9ULA0 475 aa9.04□□□□□ -0.96
SF3A1-206ENST00000471037 ZNF148Q9UQR1 794 aa9.04□□□□□ -0.96
SF3A1-206ENST00000471037 PCDHGA3Q9Y5H0 932 aa9.04□□□□□ -0.96
SF3A1-206ENST00000471037 TLN1Q9Y490 2541 aaKnown RBP9.04□□□□□ -0.96
SF3A1-206ENST00000471037 BOD1L1Q8NFC6 3051 aa9.03□□□□□ -0.96
SF3A1-206ENST00000471037 PRSS38A1L453 326 aa9.03□□□□□ -0.96
SF3A1-206ENST00000471037 FAM187AA6NFU0 413 aa9.03□□□□□ -0.96
SF3A1-206ENST00000471037 STMND1H3BQB6 276 aa9.03□□□□□ -0.96
SF3A1-206ENST00000471037 DFFAO00273 331 aa9.03□□□□□ -0.96
SF3A1-206ENST00000471037 B4GAT1O43505 415 aa9.03□□□□□ -0.96
SF3A1-206ENST00000471037 MAP3K6O95382 1288 aa9.03□□□□□ -0.96
SF3A1-206ENST00000471037 ECEL1O95672 775 aa9.03□□□□□ -0.96
SF3A1-206ENST00000471037 MYCLP1P12525 358 aaPredicted RBP9.03□□□□□ -0.96
SF3A1-206ENST00000471037 STIP1P31948 543 aaKnown RBP9.03□□□□□ -0.96
SF3A1-206ENST00000471037 PAPOLAP51003 745 aaKnown RBP9.03□□□□□ -0.96
SF3A1-206ENST00000471037 AP1S1P61966 158 aa9.03□□□□□ -0.96
SF3A1-206ENST00000471037 NFKB2Q00653 900 aa9.03□□□□□ -0.96
SF3A1-206ENST00000471037 DR1Q01658 176 aa9.03□□□□□ -0.96
SF3A1-206ENST00000471037 BCL2L1Q07817 233 aa9.03□□□□□ -0.96
SF3A1-206ENST00000471037 SRSF1Q07955 248 aaKnown RBP eCLIP9.03□□□□□ -0.96
SF3A1-206ENST00000471037 PPIDQ08752 370 aaKnown RBP9.03□□□□□ -0.96
SF3A1-206ENST00000471037 NSUN2Q08J23 767 aaKnown RBP eCLIP9.03□□□□□ -0.96
SF3A1-206ENST00000471037 TRA2AQ13595 282 aaKnown RBP eCLIP9.03□□□□□ -0.96
SF3A1-206ENST00000471037 RFTN1Q14699 578 aaPredicted RBP9.03□□□□□ -0.96
SF3A1-206ENST00000471037 PRKD1Q15139 912 aaPredicted RBP9.03□□□□□ -0.96
SF3A1-206ENST00000471037 TIGD7Q6NT04 549 aaPredicted RBP9.03□□□□□ -0.96
SF3A1-206ENST00000471037 C8orf74Q6P047 294 aa9.03□□□□□ -0.96
SF3A1-206ENST00000471037 PNCKQ6P2M8 343 aa9.03□□□□□ -0.96
SF3A1-206ENST00000471037 TTC27Q6P3X3 843 aa9.03□□□□□ -0.96
SF3A1-206ENST00000471037 DARS2Q6PI48 645 aaKnown RBP9.03□□□□□ -0.96
SF3A1-206ENST00000471037 ZNF574Q6ZN55 896 aaPredicted RBP9.03□□□□□ -0.96
SF3A1-206ENST00000471037 ZC3H18Q86VM9 953 aaKnown RBP9.03□□□□□ -0.96
SF3A1-206ENST00000471037 NRROSQ86YC3 692 aa9.03□□□□□ -0.96
SF3A1-206ENST00000471037 PELI3Q8N2H9 469 aa9.03□□□□□ -0.96
SF3A1-206ENST00000471037 ATPAF2Q8N5M1 289 aa9.03□□□□□ -0.96
SF3A1-206ENST00000471037 NOA1Q8NC60 698 aaKnown RBP9.03□□□□□ -0.96
SF3A1-206ENST00000471037 FATE1Q969F0 183 aa9.03□□□□□ -0.96
SF3A1-206ENST00000471037 CELF6Q96J87 481 aaKnown RBP9.03□□□□□ -0.96
SF3A1-206ENST00000471037 COQ10AQ96MF6 247 aa9.03□□□□□ -0.96
SF3A1-206ENST00000471037 FAM118BQ9BPY3 351 aa9.03□□□□□ -0.96
SF3A1-206ENST00000471037 SLC12A9Q9BXP2 914 aa9.03□□□□□ -0.96
SF3A1-206ENST00000471037 SLC39A8Q9C0K1 460 aa9.03□□□□□ -0.96
SF3A1-206ENST00000471037 ADNPQ9H2P0 1102 aa9.03□□□□□ -0.96
SF3A1-206ENST00000471037 RDH14Q9HBH5 336 aa9.03□□□□□ -0.96
SF3A1-206ENST00000471037 SPATS2LQ9NUQ6 558 aaKnown RBP9.03□□□□□ -0.96
SF3A1-206ENST00000471037 TRNAU1APQ9NX07 287 aaKnown RBP9.03□□□□□ -0.96
SF3A1-206ENST00000471037 KCTD5Q9NXV2 234 aa9.03□□□□□ -0.96
SF3A1-206ENST00000471037 PTPN13Q12923 2485 aa9.03□□□□□ -0.96
SF3A1-206ENST00000471037 IGHV5-10-1A0A0J9YXX1 117 aa9.02□□□□□ -0.97
SF3A1-206ENST00000471037 ZW10O43264 779 aa9.02□□□□□ -0.97
SF3A1-206ENST00000471037 STK10O94804 968 aaKnown RBP9.02□□□□□ -0.97
SF3A1-206ENST00000471037 FGF1P05230 155 aa9.02□□□□□ -0.97
SF3A1-206ENST00000471037 CCL4P13236 92 aa9.02□□□□□ -0.97
SF3A1-206ENST00000471037 CCNCP24863 283 aa9.02□□□□□ -0.97
SF3A1-206ENST00000471037 PTGIRP43119 386 aa9.02□□□□□ -0.97
SF3A1-206ENST00000471037 GPR3P46089 330 aa9.02□□□□□ -0.97
SF3A1-206ENST00000471037 KCNJ1P48048 391 aa9.02□□□□□ -0.97
SF3A1-206ENST00000471037 ATP1A2P50993 1020 aa9.02□□□□□ -0.97
SF3A1-206ENST00000471037 ARSDP51689 593 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms