RNA–Protein interactions for RNA: ENST00000468565.1

COL27A1-203, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 1,946 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-203ENST00000468565 CDCP2Q5VXM1 449 aa14.4□□□□□ -0.1
COL27A1-203ENST00000468565 BBS12Q6ZW61 710 aa14.4□□□□□ -0.1
COL27A1-203ENST00000468565 ARFGAP2Q8N6H7 521 aa14.4□□□□□ -0.1
COL27A1-203ENST00000468565 NAT6Q93015 286 aa14.4□□□□□ -0.1
COL27A1-203ENST00000468565 AP2M1Q96CW1 435 aa14.4□□□□□ -0.1
COL27A1-203ENST00000468565 AGAP3Q96P47 875 aa14.4□□□□□ -0.1
COL27A1-203ENST00000468565 TRIB3Q96RU7 358 aa14.4□□□□□ -0.1
COL27A1-203ENST00000468565 MLPHQ9BV36 600 aaPredicted RBP14.4□□□□□ -0.1
COL27A1-203ENST00000468565 ABCG8Q9H221 673 aa14.4□□□□□ -0.1
COL27A1-203ENST00000468565 MRPL40Q9NQ50 206 aaKnown RBP14.4□□□□□ -0.1
COL27A1-203ENST00000468565 ZDHHC18Q9NUE0 388 aa14.4□□□□□ -0.1
COL27A1-203ENST00000468565 SNX24Q9Y343 169 aa14.4□□□□□ -0.1
COL27A1-203ENST00000468565 NFS1Q9Y697 457 aa14.4□□□□□ -0.1
COL27A1-203ENST00000468565 FREM2Q5SZK8 3169 aa14.39□□□□□ -0.11
COL27A1-203ENST00000468565 PRSS38A1L453 326 aa14.39□□□□□ -0.11
COL27A1-203ENST00000468565 MT-CO3P00414 261 aa14.39□□□□□ -0.11
COL27A1-203ENST00000468565 NR1D1P20393 614 aa14.39□□□□□ -0.11
COL27A1-203ENST00000468565 GPR1P46091 355 aa14.39□□□□□ -0.11
COL27A1-203ENST00000468565 ZNF844Q08AG5 666 aa14.39□□□□□ -0.11
COL27A1-203ENST00000468565 DNAJC21Q5F1R6 531 aaKnown RBP14.39□□□□□ -0.11
COL27A1-203ENST00000468565 TTC27Q6P3X3 843 aa14.39□□□□□ -0.11
COL27A1-203ENST00000468565 GUSBP11Q6P575 273 aa14.39□□□□□ -0.11
COL27A1-203ENST00000468565 ADAMTSL4Q6UY14 1074 aa14.39□□□□□ -0.11
COL27A1-203ENST00000468565 EFL1Q7Z2Z2 1120 aaKnown RBP14.39□□□□□ -0.11
COL27A1-203ENST00000468565 ARL10Q8N8L6 244 aa14.39□□□□□ -0.11
COL27A1-203ENST00000468565 TEKT5Q96M29 485 aa14.39□□□□□ -0.11
COL27A1-203ENST00000468565 FRMD8Q9BZ67 464 aaPredicted RBP14.39□□□□□ -0.11
COL27A1-203ENST00000468565 TXLNGYQ9BZA5 131 aa14.39□□□□□ -0.11
COL27A1-203ENST00000468565 GLOD4Q9HC38 313 aa14.39□□□□□ -0.11
COL27A1-203ENST00000468565 CD84Q9UIB8 345 aa14.39□□□□□ -0.11
COL27A1-203ENST00000468565 EFR3BQ9Y2G0 817 aa14.39□□□□□ -0.11
COL27A1-203ENST00000468565 APC2O95996 2303 aa14.39□□□□□ -0.11
COL27A1-203ENST00000468565 A0A0U1RQS6 177 aa14.39□□□□□ -0.11
COL27A1-203ENST00000468565 CPED1A4D0V7 1026 aa14.39□□□□□ -0.11
COL27A1-203ENST00000468565 HACD1B0YJ81 288 aa14.39□□□□□ -0.11
COL27A1-203ENST00000468565 APOC4-APOC2K7ER74 178 aa14.39□□□□□ -0.11
COL27A1-203ENST00000468565 EIF3HO15372 352 aaKnown RBP eCLIP14.39□□□□□ -0.116e-19■■■■■ 27.4
COL27A1-203ENST00000468565 CLDN7O95471 211 aa14.39□□□□□ -0.11
COL27A1-203ENST00000468565 ECEL1O95672 775 aa14.39□□□□□ -0.11
COL27A1-203ENST00000468565 SOD1P00441 154 aa14.39□□□□□ -0.11
COL27A1-203ENST00000468565 APOC2P02655 101 aa14.39□□□□□ -0.11
COL27A1-203ENST00000468565 PTPN7P35236 360 aa14.39□□□□□ -0.11
COL27A1-203ENST00000468565 PLTPP55058 493 aa14.39□□□□□ -0.11
COL27A1-203ENST00000468565 LLGL1Q15334 1064 aa14.39□□□□□ -0.11
COL27A1-203ENST00000468565 SIX1Q15475 284 aaPredicted RBP14.39□□□□□ -0.11
COL27A1-203ENST00000468565 AGBL2Q5U5Z8 902 aa14.39□□□□□ -0.11
COL27A1-203ENST00000468565 MDM1Q8TC05 714 aa14.39□□□□□ -0.11
COL27A1-203ENST00000468565 MAPK15Q8TD08 544 aa14.39□□□□□ -0.11
COL27A1-203ENST00000468565 NXPE2Q96DL1 559 aa14.39□□□□□ -0.11
COL27A1-203ENST00000468565 VAT1Q99536 393 aa14.39□□□□□ -0.11
COL27A1-203ENST00000468565 NRSN2Q9GZP1 204 aa14.39□□□□□ -0.11
COL27A1-203ENST00000468565 CYP4F12Q9HCS2 524 aa14.39□□□□□ -0.11
COL27A1-203ENST00000468565 PADI4Q9UM07 663 aa14.39□□□□□ -0.11
COL27A1-203ENST00000468565 DMXL2Q8TDJ6 3036 aa14.38□□□□□ -0.11
COL27A1-203ENST00000468565 C1orf232A0A0U1RR37 186 aa14.38□□□□□ -0.11
COL27A1-203ENST00000468565 TCRBV7S2A1N4TA0A589 114 aa14.38□□□□□ -0.11
COL27A1-203ENST00000468565 RGSL1A5PLK6 1076 aa14.38□□□□□ -0.11
COL27A1-203ENST00000468565 SRRM3A6NNA2 597 aaPredicted RBP14.38□□□□□ -0.11
COL27A1-203ENST00000468565 CEACAM5P06731 702 aa14.38□□□□□ -0.11
COL27A1-203ENST00000468565 CDK18Q07002 472 aa14.38□□□□□ -0.11
COL27A1-203ENST00000468565 IFFO1Q0D2I5 559 aa14.38□□□□□ -0.11
COL27A1-203ENST00000468565 WASHC5Q12768 1159 aa14.38□□□□□ -0.11
COL27A1-203ENST00000468565 XRCC4Q13426 336 aa14.38□□□□□ -0.11
COL27A1-203ENST00000468565 RFLNAQ6ZTI6 216 aa14.38□□□□□ -0.11
COL27A1-203ENST00000468565 SYDE1Q6ZW31 735 aaPredicted RBP14.38□□□□□ -0.11
COL27A1-203ENST00000468565 B4GALNT4Q76KP1 1039 aa14.38□□□□□ -0.11
COL27A1-203ENST00000468565 CCHCR1Q8TD31 782 aa14.38□□□□□ -0.11
COL27A1-203ENST00000468565 SLCO2A1Q92959 643 aa14.38□□□□□ -0.11
COL27A1-203ENST00000468565 QKIQ96PU8 341 aaKnown RBP eCLIP14.38□□□□□ -0.11
COL27A1-203ENST00000468565 DEPDC7Q96QD5 511 aa14.38□□□□□ -0.11
COL27A1-203ENST00000468565 CENPHQ9H3R5 247 aa14.38□□□□□ -0.11
COL27A1-203ENST00000468565 YY1AP1Q9H869 796 aa14.38□□□□□ -0.11
COL27A1-203ENST00000468565 GRHL1Q9NZI5 618 aa14.38□□□□□ -0.11
COL27A1-203ENST00000468565 PKD2L2Q9NZM6 624 aa14.38□□□□□ -0.11
COL27A1-203ENST00000468565 MOSPD1Q9UJG1 213 aa14.38□□□□□ -0.11
COL27A1-203ENST00000468565 GPR34Q9UPC5 381 aa14.38□□□□□ -0.11
COL27A1-203ENST00000468565 SLC17A4Q9Y2C5 497 aa14.38□□□□□ -0.11
COL27A1-203ENST00000468565 UNC13CQ8NB66 2214 aa14.38□□□□□ -0.11
COL27A1-203ENST00000468565 TAF4O00268 1085 aa14.37□□□□□ -0.11
COL27A1-203ENST00000468565 RPL21P46778 160 aaKnown RBP14.37□□□□□ -0.11
COL27A1-203ENST00000468565 SPINT3P49223 89 aa14.37□□□□□ -0.11
COL27A1-203ENST00000468565 PMS2P54278 862 aa14.37□□□□□ -0.11
COL27A1-203ENST00000468565 GALNT3Q14435 633 aa14.37□□□□□ -0.11
COL27A1-203ENST00000468565 RTP5Q14D33 572 aa14.37□□□□□ -0.11
COL27A1-203ENST00000468565 PPP1R7Q15435 360 aa14.37□□□□□ -0.11
COL27A1-203ENST00000468565 ZDHHC24Q6UX98 284 aa14.37□□□□□ -0.11
COL27A1-203ENST00000468565 TAF8Q7Z7C8 310 aa14.37□□□□□ -0.11
COL27A1-203ENST00000468565 ZC3H18Q86VM9 953 aaKnown RBP14.37□□□□□ -0.11
COL27A1-203ENST00000468565 OR6C4Q8NGE1 309 aa14.37□□□□□ -0.11
COL27A1-203ENST00000468565 OR2W6PQ8NHA6 318 aa14.37□□□□□ -0.11
COL27A1-203ENST00000468565 WDR48Q8TAF3 677 aa14.37□□□□□ -0.11
COL27A1-203ENST00000468565 GRK7Q8WTQ7 553 aa14.37□□□□□ -0.11
COL27A1-203ENST00000468565 SCAMP4Q969E2 229 aa14.37□□□□□ -0.11
COL27A1-203ENST00000468565 SRPK1Q96SB4 655 aaKnown RBP14.37□□□□□ -0.11
COL27A1-203ENST00000468565 TMEM168Q9H0V1 697 aa14.37□□□□□ -0.11
COL27A1-203ENST00000468565 ABCG4Q9H172 646 aa14.37□□□□□ -0.11
COL27A1-203ENST00000468565 CARS2Q9HA77 564 aaKnown RBP14.37□□□□□ -0.11
COL27A1-203ENST00000468565 HOMER3Q9NSC5 361 aa14.37□□□□□ -0.11
COL27A1-203ENST00000468565 TRNAU1APQ9NX07 287 aaKnown RBP14.37□□□□□ -0.11
COL27A1-203ENST00000468565 MT-CYBP00156 380 aaPredicted RBP14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms