RNA–Protein interactions for RNA: ENST00000467731.1

SCAF4-204, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 1 (best)

Gene SCAF4, Length 2,976 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-204ENST00000467731 CREB5Q02930 508 aa6.82□□□□□ -1.32
SCAF4-204ENST00000467731 NFATC2Q13469 925 aa6.82□□□□□ -1.32
SCAF4-204ENST00000467731 FGL2Q14314 439 aa6.82□□□□□ -1.32
SCAF4-204ENST00000467731 FRG1Q14331 258 aaKnown RBP6.82□□□□□ -1.32
SCAF4-204ENST00000467731 MAP7D1Q3KQU3 841 aa6.82□□□□□ -1.32
SCAF4-204ENST00000467731 ATP13A5Q4VNC0 1218 aa6.82□□□□□ -1.32
SCAF4-204ENST00000467731 ZRANB3Q5FWF4 1079 aa6.82□□□□□ -1.32
SCAF4-204ENST00000467731 ZNF470Q6ECI4 717 aa6.82□□□□□ -1.32
SCAF4-204ENST00000467731 CAPRIN2Q6IMN6 1127 aaKnown RBP6.82□□□□□ -1.32
SCAF4-204ENST00000467731 PSAPL1Q6NUJ1 521 aa6.82□□□□□ -1.32
SCAF4-204ENST00000467731 NEK5Q6P3R8 708 aa6.82□□□□□ -1.32
SCAF4-204ENST00000467731 CYS1Q717R9 158 aa6.82□□□□□ -1.32
SCAF4-204ENST00000467731 CYP2U1Q7Z449 544 aa6.82□□□□□ -1.32
SCAF4-204ENST00000467731 BMP8AQ7Z5Y6 402 aa6.82□□□□□ -1.32
SCAF4-204ENST00000467731 DENND6AQ8IWF6 608 aa6.82□□□□□ -1.32
SCAF4-204ENST00000467731 CTAGE3PQ8IX95 158 aa6.82□□□□□ -1.32
SCAF4-204ENST00000467731 PIANPQ8IYJ0 282 aa6.82□□□□□ -1.32
SCAF4-204ENST00000467731 MAML2Q8IZL2 1156 aaPredicted RBP6.82□□□□□ -1.32
SCAF4-204ENST00000467731 PELI3Q8N2H9 469 aa6.82□□□□□ -1.32
SCAF4-204ENST00000467731 MAGEC3Q8TD91 643 aa6.82□□□□□ -1.32
SCAF4-204ENST00000467731 AP2M1Q96CW1 435 aa6.82□□□□□ -1.32
SCAF4-204ENST00000467731 MRRFQ96E11 262 aaKnown RBP6.82□□□□□ -1.32
SCAF4-204ENST00000467731 DTNBP1Q96EV8 351 aa6.82□□□□□ -1.32
SCAF4-204ENST00000467731 RUFY1Q96T51 708 aa6.82□□□□□ -1.32
SCAF4-204ENST00000467731 RIOK2Q9BVS4 552 aaKnown RBP6.82□□□□□ -1.32
SCAF4-204ENST00000467731 SPATA16Q9BXB7 569 aa6.82□□□□□ -1.32
SCAF4-204ENST00000467731 GPR174Q9BXC1 333 aa6.82□□□□□ -1.32
SCAF4-204ENST00000467731 SLC17A9Q9BYT1 436 aa6.82□□□□□ -1.32
SCAF4-204ENST00000467731 ABCG8Q9H221 673 aa6.82□□□□□ -1.32
SCAF4-204ENST00000467731 FAM83DQ9H4H8 585 aa6.82□□□□□ -1.32
SCAF4-204ENST00000467731 FAM96AQ9H5X1 160 aa6.82□□□□□ -1.32
SCAF4-204ENST00000467731 C6orf106Q9H6K1 298 aaPredicted RBP6.82□□□□□ -1.32
SCAF4-204ENST00000467731 IARS2Q9NSE4 1012 aaKnown RBP6.82□□□□□ -1.32
SCAF4-204ENST00000467731 CATSPERZQ9NTU4 200 aa6.82□□□□□ -1.32
SCAF4-204ENST00000467731 MARCH4Q9P2E8 410 aaPredicted RBP6.82□□□□□ -1.32
SCAF4-204ENST00000467731 PLAAQ9Y263 795 aa6.82□□□□□ -1.32
SCAF4-204ENST00000467731 SLC30A1Q9Y6M5 507 aa6.82□□□□□ -1.32
SCAF4-204ENST00000467731 CACNA1HO95180 2353 aa6.81□□□□□ -1.32
SCAF4-204ENST00000467731 EXOC1LA0A1B0GW35 172 aa6.81□□□□□ -1.32
SCAF4-204ENST00000467731 RGSL1A5PLK6 1076 aa6.81□□□□□ -1.32
SCAF4-204ENST00000467731 K7ESM1 405 aa6.81□□□□□ -1.32
SCAF4-204ENST00000467731 CD3EAPO15446 510 aaKnown RBP6.81□□□□□ -1.32
SCAF4-204ENST00000467731 UGT1A9O60656 530 aa6.81□□□□□ -1.32
SCAF4-204ENST00000467731 NUDT17P0C025 328 aa6.81□□□□□ -1.32
SCAF4-204ENST00000467731 UGT1A6P19224 532 aa6.81□□□□□ -1.32
SCAF4-204ENST00000467731 UGT1A1P22309 533 aa6.81□□□□□ -1.32
SCAF4-204ENST00000467731 UGT1A4P22310 534 aa6.81□□□□□ -1.32
SCAF4-204ENST00000467731 FOXN2P32314 431 aa6.81□□□□□ -1.32
SCAF4-204ENST00000467731 CA5AP35218 305 aa6.81□□□□□ -1.32
SCAF4-204ENST00000467731 UGT1A3P35503 534 aa6.81□□□□□ -1.32
SCAF4-204ENST00000467731 UGT1A5P35504 534 aa6.81□□□□□ -1.32
SCAF4-204ENST00000467731 SLC1A2P43004 574 aa6.81□□□□□ -1.32
SCAF4-204ENST00000467731 MGAT5Q09328 741 aa6.81□□□□□ -1.32
SCAF4-204ENST00000467731 CTBP1Q13363 440 aa6.81□□□□□ -1.32
SCAF4-204ENST00000467731 THOC5Q13769 683 aaKnown RBP6.81□□□□□ -1.32
SCAF4-204ENST00000467731 SEMA3AQ14563 771 aa6.81□□□□□ -1.32
SCAF4-204ENST00000467731 KRT72Q14CN4 511 aa6.81□□□□□ -1.32
SCAF4-204ENST00000467731 CHRNA6Q15825 494 aa6.81□□□□□ -1.32
SCAF4-204ENST00000467731 ZNF284Q2VY69 593 aa6.81□□□□□ -1.32
SCAF4-204ENST00000467731 CCDC92Q53HC0 331 aaPredicted RBP6.81□□□□□ -1.32
SCAF4-204ENST00000467731 FASTKD1Q53R41 847 aaKnown RBP6.81□□□□□ -1.32
SCAF4-204ENST00000467731 TEDDM1Q5T9Z0 273 aa6.81□□□□□ -1.32
SCAF4-204ENST00000467731 ZDHHC20Q5W0Z9 365 aa6.81□□□□□ -1.32
SCAF4-204ENST00000467731 NEPROQ6NW34 567 aa6.81□□□□□ -1.32
SCAF4-204ENST00000467731 SNX20Q7Z614 316 aa6.81□□□□□ -1.32
SCAF4-204ENST00000467731 LDB1Q86U70 411 aaPredicted RBP6.81□□□□□ -1.32
SCAF4-204ENST00000467731 LRRC6Q86X45 466 aa6.81□□□□□ -1.32
SCAF4-204ENST00000467731 RAVER1Q8IY67 606 aaKnown RBP6.81□□□□□ -1.32
SCAF4-204ENST00000467731 NRSN1Q8IZ57 195 aa6.81□□□□□ -1.32
SCAF4-204ENST00000467731 CDKL2Q92772 493 aa6.81□□□□□ -1.32
SCAF4-204ENST00000467731 RSRC1Q96IZ7 334 aaKnown RBP6.81□□□□□ -1.32
SCAF4-204ENST00000467731 CYTH2Q99418 400 aa6.81□□□□□ -1.32
SCAF4-204ENST00000467731 COL25A1Q9BXS0 654 aaPredicted RBP6.81□□□□□ -1.32
SCAF4-204ENST00000467731 CDH19Q9H159 772 aa6.81□□□□□ -1.32
SCAF4-204ENST00000467731 ASB8Q9H765 288 aa6.81□□□□□ -1.32
SCAF4-204ENST00000467731 UGT1A7Q9HAW7 530 aa6.81□□□□□ -1.32
SCAF4-204ENST00000467731 UGT1A10Q9HAW8 530 aa6.81□□□□□ -1.32
SCAF4-204ENST00000467731 UGT1A8Q9HAW9 530 aa6.81□□□□□ -1.32
SCAF4-204ENST00000467731 FZD3Q9NPG1 666 aa6.81□□□□□ -1.32
SCAF4-204ENST00000467731 NFKBIL1Q9UBC1 381 aaPredicted RBP6.81□□□□□ -1.32
SCAF4-204ENST00000467731 PSAT1Q9Y617 370 aa6.81□□□□□ -1.32
SCAF4-204ENST00000467731 PI4KAP42356 2102 aa6.81□□□□□ -1.32
SCAF4-204ENST00000467731 FADS2P1A8MWK0 482 aa6.81□□□□□ -1.32
SCAF4-204ENST00000467731 POC1B-GALNT4F8VUJ3 575 aa6.81□□□□□ -1.32
SCAF4-204ENST00000467731 SLC31A1O15431 190 aa6.81□□□□□ -1.32
SCAF4-204ENST00000467731 SOD1P00441 154 aa6.81□□□□□ -1.32
SCAF4-204ENST00000467731 TDGF1P13385 188 aa6.81□□□□□ -1.32
SCAF4-204ENST00000467731 HOXA6P31267 233 aa6.81□□□□□ -1.32
SCAF4-204ENST00000467731 CSTF1Q05048 431 aaKnown RBP6.81□□□□□ -1.32
SCAF4-204ENST00000467731 SGCGQ13326 291 aa6.81□□□□□ -1.32
SCAF4-204ENST00000467731 ITGA9Q13797 1035 aa6.81□□□□□ -1.32
SCAF4-204ENST00000467731 AGERQ15109 404 aa6.81□□□□□ -1.32
SCAF4-204ENST00000467731 SETMARQ53H47 684 aaPredicted RBP6.81□□□□□ -1.32
SCAF4-204ENST00000467731 RAET1GQ6H3X3 334 aa6.81□□□□□ -1.32
SCAF4-204ENST00000467731 ZNF449Q6P9G9 518 aa6.81□□□□□ -1.32
SCAF4-204ENST00000467731 TRIM69Q86WT6 500 aa6.81□□□□□ -1.32
SCAF4-204ENST00000467731 CILP2Q8IUL8 1156 aa6.81□□□□□ -1.32
SCAF4-204ENST00000467731 CNTN4Q8IWV2 1026 aa6.81□□□□□ -1.32
SCAF4-204ENST00000467731 IQCKQ8N0W5 287 aa6.81□□□□□ -1.32
SCAF4-204ENST00000467731 PPM1NQ8N819 430 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms