RNA–Protein interactions for RNA: ENST00000466100.1

VCP-204, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 508 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-204ENST00000466100 F7P08709 466 aaPredicted RBP11.05□□□□□ -0.64
VCP-204ENST00000466100 HOXC4P09017 264 aaPredicted RBP11.05□□□□□ -0.64
VCP-204ENST00000466100 ACRV1P26436 265 aa11.05□□□□□ -0.64
VCP-204ENST00000466100 PHBP35232 272 aa11.05□□□□□ -0.64
VCP-204ENST00000466100 SLC1A2P43004 574 aa11.05□□□□□ -0.64
VCP-204ENST00000466100 GPR1P46091 355 aa11.05□□□□□ -0.64
VCP-204ENST00000466100 CLDN2P57739 230 aa11.05□□□□□ -0.64
VCP-204ENST00000466100 PFN3P60673 137 aa11.05□□□□□ -0.64
VCP-204ENST00000466100 CDK3Q00526 305 aa11.05□□□□□ -0.64
VCP-204ENST00000466100 B4GALNT1Q00973 533 aa11.05□□□□□ -0.64
VCP-204ENST00000466100 SLC29A2Q14542 456 aa11.05□□□□□ -0.64
VCP-204ENST00000466100 INPP5AQ14642 412 aa11.05□□□□□ -0.64
VCP-204ENST00000466100 EFTUD2Q15029 972 aaKnown RBP eCLIP11.05□□□□□ -0.64
VCP-204ENST00000466100 DBN1Q16643 649 aa11.05□□□□□ -0.64
VCP-204ENST00000466100 KBTBD12Q3ZCT8 623 aa11.05□□□□□ -0.64
VCP-204ENST00000466100 ZRANB3Q5FWF4 1079 aa11.05□□□□□ -0.64
VCP-204ENST00000466100 TPRG1LQ5T0D9 272 aa11.05□□□□□ -0.64
VCP-204ENST00000466100 GPRC6AQ5T6X5 926 aa11.05□□□□□ -0.64
VCP-204ENST00000466100 ZNF470Q6ECI4 717 aa11.05□□□□□ -0.64
VCP-204ENST00000466100 RALGAPA1Q6GYQ0 2036 aa11.05□□□□□ -0.64
VCP-204ENST00000466100 KIAA0408Q6ZU52 694 aa11.05□□□□□ -0.64
VCP-204ENST00000466100 MARK2Q7KZI7 788 aaKnown RBP11.05□□□□□ -0.64
VCP-204ENST00000466100 LPCAT2Q7L5N7 544 aa11.05□□□□□ -0.64
VCP-204ENST00000466100 GALNT7Q86SF2 657 aa11.05□□□□□ -0.64
VCP-204ENST00000466100 SERPINA9Q86WD7 417 aa11.05□□□□□ -0.64
VCP-204ENST00000466100 HEATR4Q86WZ0 1026 aa11.05□□□□□ -0.64
VCP-204ENST00000466100 DENND6AQ8IWF6 608 aa11.05□□□□□ -0.64
VCP-204ENST00000466100 C2CD4AQ8NCU7 369 aaPredicted RBP11.05□□□□□ -0.64
VCP-204ENST00000466100 PRSS33Q8NF86 280 aa11.05□□□□□ -0.64
VCP-204ENST00000466100 SNX19Q92543 992 aa11.05□□□□□ -0.64
VCP-204ENST00000466100 ULK4Q96C45 1275 aa11.05□□□□□ -0.64
VCP-204ENST00000466100 SLC6A18Q96N87 628 aa11.05□□□□□ -0.64
VCP-204ENST00000466100 IARS2Q9NSE4 1012 aaKnown RBP11.05□□□□□ -0.64
VCP-204ENST00000466100 EIF2B4Q9UI10 523 aaKnown RBP11.05□□□□□ -0.64
VCP-204ENST00000466100 FBXO5Q9UKT4 447 aa11.05□□□□□ -0.64
VCP-204ENST00000466100 PSAT1Q9Y617 370 aa11.05□□□□□ -0.64
VCP-204ENST00000466100 OAS3Q9Y6K5 1087 aaKnown RBP11.05□□□□□ -0.64
VCP-204ENST00000466100 TDRD6O60522 2096 aaKnown RBP11.05□□□□□ -0.64
VCP-204ENST00000466100 CABIN1Q9Y6J0 2220 aa11.04□□□□□ -0.64
VCP-204ENST00000466100 ADAMTS9Q9P2N4 1935 aa11.04□□□□□ -0.64
VCP-204ENST00000466100 A0A087WUV0 522 aaPredicted RBP11.04□□□□□ -0.64
VCP-204ENST00000466100 FPGTO14772 594 aa11.04□□□□□ -0.64
VCP-204ENST00000466100 S1PR4O95977 384 aa11.04□□□□□ -0.64
VCP-204ENST00000466100 WNT1P04628 370 aa11.04□□□□□ -0.64
VCP-204ENST00000466100 NUDT17P0C025 328 aa11.04□□□□□ -0.64
VCP-204ENST00000466100 ITPKAP23677 461 aa11.04□□□□□ -0.64
VCP-204ENST00000466100 GABRB3P28472 473 aa11.04□□□□□ -0.64
VCP-204ENST00000466100 GCAP28676 217 aa11.04□□□□□ -0.64
VCP-204ENST00000466100 KIAA1024LP59773 190 aa11.04□□□□□ -0.64
VCP-204ENST00000466100 MPP1Q00013 466 aa11.04□□□□□ -0.64
VCP-204ENST00000466100 TCF15Q12870 199 aa11.04□□□□□ -0.64
VCP-204ENST00000466100 CTBP1Q13363 440 aa11.04□□□□□ -0.64
VCP-204ENST00000466100 NAB1Q13506 487 aa11.04□□□□□ -0.64
VCP-204ENST00000466100 THOC5Q13769 683 aaKnown RBP11.04□□□□□ -0.64
VCP-204ENST00000466100 ITIH4Q14624 930 aa11.04□□□□□ -0.64
VCP-204ENST00000466100 FASTKD1Q53R41 847 aaKnown RBP11.04□□□□□ -0.64
VCP-204ENST00000466100 ZNF789Q5FWF6 425 aa11.04□□□□□ -0.64
VCP-204ENST00000466100 AARS2Q5JTZ9 985 aaKnown RBP11.04□□□□□ -0.64
VCP-204ENST00000466100 PEAR1Q5VY43 1037 aaPredicted RBP11.04□□□□□ -0.64
VCP-204ENST00000466100 MRNIPQ6NTE8 343 aa11.04□□□□□ -0.64
VCP-204ENST00000466100 PACS1Q6VY07 963 aa11.04□□□□□ -0.64
VCP-204ENST00000466100 CERS6Q6ZMG9 384 aa11.04□□□□□ -0.64
VCP-204ENST00000466100 LDB1Q86U70 411 aaPredicted RBP11.04□□□□□ -0.64
VCP-204ENST00000466100 TRIM74Q86UV6 250 aa11.04□□□□□ -0.64
VCP-204ENST00000466100 SLC26A11Q86WA9 606 aa11.04□□□□□ -0.64
VCP-204ENST00000466100 PHYKPLQ8IUZ5 450 aa11.04□□□□□ -0.64
VCP-204ENST00000466100 SLC22A18ASQ8N1D0 253 aa11.04□□□□□ -0.64
VCP-204ENST00000466100 UHMK1Q8TAS1 419 aaKnown RBP11.04□□□□□ -0.64
VCP-204ENST00000466100 CALML6Q8TD86 181 aa11.04□□□□□ -0.64
VCP-204ENST00000466100 UBLCP1Q8WVY7 318 aaPredicted RBP11.04□□□□□ -0.64
VCP-204ENST00000466100 LPGAT1Q92604 370 aa11.04□□□□□ -0.64
VCP-204ENST00000466100 HIC2Q96JB3 615 aa11.04□□□□□ -0.64
VCP-204ENST00000466100 SERAC1Q96JX3 654 aa11.04□□□□□ -0.64
VCP-204ENST00000466100 TCF12Q99081 682 aa11.04□□□□□ -0.64
VCP-204ENST00000466100 CYTH2Q99418 400 aa11.04□□□□□ -0.64
VCP-204ENST00000466100 DHRS4Q9BTZ2 278 aa11.04□□□□□ -0.64
VCP-204ENST00000466100 APOOQ9BUR5 198 aa11.04□□□□□ -0.64
VCP-204ENST00000466100 BOCQ9BWV1 1114 aa11.04□□□□□ -0.64
VCP-204ENST00000466100 LGR4Q9BXB1 951 aa11.04□□□□□ -0.64
VCP-204ENST00000466100 WDR26Q9H7D7 661 aa11.04□□□□□ -0.64
VCP-204ENST00000466100 TM9SF3Q9HD45 589 aa11.04□□□□□ -0.64
VCP-204ENST00000466100 ZFATQ9P243 1243 aa11.04□□□□□ -0.64
VCP-204ENST00000466100 CRLS1Q9UJA2 301 aa11.04□□□□□ -0.64
VCP-204ENST00000466100 OR1A2Q9Y585 309 aa11.04□□□□□ -0.64
VCP-204ENST00000466100 A6NNZ2 444 aa11.03□□□□□ -0.64
VCP-204ENST00000466100 TOR1BO14657 336 aa11.03□□□□□ -0.64
VCP-204ENST00000466100 INPP4BO15327 924 aa11.03□□□□□ -0.64
VCP-204ENST00000466100 SGTAO43765 313 aa11.03□□□□□ -0.64
VCP-204ENST00000466100 SHBGP04278 402 aa11.03□□□□□ -0.64
VCP-204ENST00000466100 MYCLP1P12525 358 aaPredicted RBP11.03□□□□□ -0.64
VCP-204ENST00000466100 MAOBP27338 520 aa11.03□□□□□ -0.64
VCP-204ENST00000466100 LEPRP48357 1165 aaKnown RBP11.03□□□□□ -0.64
VCP-204ENST00000466100 TTPAP49638 278 aa11.03□□□□□ -0.64
VCP-204ENST00000466100 YPEL5P62699 121 aa11.03□□□□□ -0.64
VCP-204ENST00000466100 RACK1P63244 317 aaKnown RBP11.03□□□□□ -0.64
VCP-204ENST00000466100 WDR45BQ5MNZ6 344 aa11.03□□□□□ -0.64
VCP-204ENST00000466100 LDLRAP1Q5SW96 308 aa11.03□□□□□ -0.64
VCP-204ENST00000466100 ZNF648Q5T619 568 aaPredicted RBP11.03□□□□□ -0.64
VCP-204ENST00000466100 LYPLAL1Q5VWZ2 237 aa11.03□□□□□ -0.64
VCP-204ENST00000466100 LYSMD4Q5XG99 296 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms