RNA–Protein interactions for RNA: ENST00000459918.1

HPS4-207, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-207ENST00000459918 PHF13Q86YI8 300 aaPredicted RBP7.81□□□□□ -1.16
HPS4-207ENST00000459918 ATPAF2Q8N5M1 289 aa7.81□□□□□ -1.16
HPS4-207ENST00000459918 NPWQ8N729 165 aa7.81□□□□□ -1.16
HPS4-207ENST00000459918 CT55Q8WUE5 264 aa7.81□□□□□ -1.16
HPS4-207ENST00000459918 MOCOSQ96EN8 888 aa7.81□□□□□ -1.16
HPS4-207ENST00000459918 C9orf72Q96LT7 481 aa7.81□□□□□ -1.16
HPS4-207ENST00000459918 C5orf34Q96MH7 638 aa7.81□□□□□ -1.16
HPS4-207ENST00000459918 NUDCD1Q96RS6 583 aa7.81□□□□□ -1.16
HPS4-207ENST00000459918 RIOK2Q9BVS4 552 aaKnown RBP7.81□□□□□ -1.16
HPS4-207ENST00000459918 NAA15Q9BXJ9 866 aaKnown RBP7.81□□□□□ -1.16
HPS4-207ENST00000459918 TRIM55Q9BYV6 548 aa7.81□□□□□ -1.16
HPS4-207ENST00000459918 SPRY4Q9C004 299 aa7.81□□□□□ -1.16
HPS4-207ENST00000459918 ABCG8Q9H221 673 aa7.81□□□□□ -1.16
HPS4-207ENST00000459918 ZWILCHQ9H900 591 aa7.81□□□□□ -1.16
HPS4-207ENST00000459918 NOD2Q9HC29 1040 aa7.81□□□□□ -1.16
HPS4-207ENST00000459918 PDE7BQ9NP56 450 aa7.81□□□□□ -1.16
HPS4-207ENST00000459918 TAB2Q9NYJ8 693 aa7.81□□□□□ -1.16
HPS4-207ENST00000459918 CPNE7Q9UBL6 633 aa7.81□□□□□ -1.16
HPS4-207ENST00000459918 ESPL1Q14674 2120 aa7.81□□□□□ -1.16
HPS4-207ENST00000459918 MN1Q10571 1320 aaPredicted RBP7.8□□□□□ -1.16
HPS4-207ENST00000459918 OR5K4A6NMS3 321 aa7.8□□□□□ -1.16
HPS4-207ENST00000459918 EIF3CLB5ME19 914 aaKnown RBP7.8□□□□□ -1.16
HPS4-207ENST00000459918 C21orf140B9A014 251 aa7.8□□□□□ -1.16
HPS4-207ENST00000459918 H3BRJ5 948 aa7.8□□□□□ -1.16
HPS4-207ENST00000459918 DPM1O60762 260 aa7.8□□□□□ -1.16
HPS4-207ENST00000459918 PGLSO95336 258 aa7.8□□□□□ -1.16
HPS4-207ENST00000459918 SLC4A1P02730 911 aa7.8□□□□□ -1.16
HPS4-207ENST00000459918 ANKRD34CP0C6C1 535 aa7.8□□□□□ -1.16
HPS4-207ENST00000459918 UNGP13051 313 aaPredicted RBP7.8□□□□□ -1.16
HPS4-207ENST00000459918 CHRNB2P17787 502 aa7.8□□□□□ -1.16
HPS4-207ENST00000459918 CA4P22748 312 aa7.8□□□□□ -1.16
HPS4-207ENST00000459918 ARL4AP40617 200 aa7.8□□□□□ -1.16
HPS4-207ENST00000459918 MMP13P45452 471 aa7.8□□□□□ -1.16
HPS4-207ENST00000459918 RPS18P62269 152 aaKnown RBP7.8□□□□□ -1.16
HPS4-207ENST00000459918 TUBB3Q13509 450 aa7.8□□□□□ -1.16
HPS4-207ENST00000459918 INPP5JQ15735 1006 aaPredicted RBP7.8□□□□□ -1.16
HPS4-207ENST00000459918 KYNUQ16719 465 aa7.8□□□□□ -1.16
HPS4-207ENST00000459918 CA9Q16790 459 aa7.8□□□□□ -1.16
HPS4-207ENST00000459918 INSCQ1MX18 579 aa7.8□□□□□ -1.16
HPS4-207ENST00000459918 PRR30Q53SZ7 412 aaPredicted RBP7.8□□□□□ -1.16
HPS4-207ENST00000459918 TDRD12Q587J7 1177 aaKnown RBP7.8□□□□□ -1.16
HPS4-207ENST00000459918 PPP1R15BQ5SWA1 713 aa7.8□□□□□ -1.16
HPS4-207ENST00000459918 ERMARDQ5T6L9 678 aa7.8□□□□□ -1.16
HPS4-207ENST00000459918 MARC1Q5VT66 337 aa7.8□□□□□ -1.16
HPS4-207ENST00000459918 CACHD1Q5VU97 1274 aa7.8□□□□□ -1.16
HPS4-207ENST00000459918 IYDQ6PHW0 289 aa7.8□□□□□ -1.16
HPS4-207ENST00000459918 CRTC3Q6UUV7 619 aa7.8□□□□□ -1.16
HPS4-207ENST00000459918 TMCO3Q6UWJ1 677 aa7.8□□□□□ -1.16
HPS4-207ENST00000459918 RFLNAQ6ZTI6 216 aa7.8□□□□□ -1.16
HPS4-207ENST00000459918 APLFQ8IW19 511 aaPredicted RBP7.8□□□□□ -1.16
HPS4-207ENST00000459918 TP53INP2Q8IXH6 220 aa7.8□□□□□ -1.16
HPS4-207ENST00000459918 THAP4Q8WY91 577 aa7.8□□□□□ -1.16
HPS4-207ENST00000459918 KCTD12Q96CX2 325 aaKnown RBP7.8□□□□□ -1.16
HPS4-207ENST00000459918 SCRN2Q96FV2 425 aa7.8□□□□□ -1.16
HPS4-207ENST00000459918 ZNF599Q96NL3 588 aa7.8□□□□□ -1.16
HPS4-207ENST00000459918 AGAP2Q99490 1192 aa7.8□□□□□ -1.16
HPS4-207ENST00000459918 EIF3CQ99613 913 aaKnown RBP7.8□□□□□ -1.16
HPS4-207ENST00000459918 SNRNP25Q9BV90 132 aaKnown RBP7.8□□□□□ -1.16
HPS4-207ENST00000459918 ING2Q9H160 280 aa7.8□□□□□ -1.16
HPS4-207ENST00000459918 LHX9Q9NQ69 397 aa7.8□□□□□ -1.16
HPS4-207ENST00000459918 KLC4Q9NSK0 619 aa7.8□□□□□ -1.16
HPS4-207ENST00000459918 HAUS2Q9NVX0 235 aa7.8□□□□□ -1.16
HPS4-207ENST00000459918 SIDT1Q9NXL6 827 aaKnown RBP7.8□□□□□ -1.16
HPS4-207ENST00000459918 VPS18Q9P253 973 aa7.8□□□□□ -1.16
HPS4-207ENST00000459918 RARRES3Q9UL19 164 aa7.8□□□□□ -1.16
HPS4-207ENST00000459918 DNAJC16Q9Y2G8 782 aa7.8□□□□□ -1.16
HPS4-207ENST00000459918 ZNF451Q9Y4E5 1061 aa7.8□□□□□ -1.16
HPS4-207ENST00000459918 MAP4K5Q9Y4K4 846 aa7.8□□□□□ -1.16
HPS4-207ENST00000459918 LILRA5A6NI73 299 aa7.79□□□□□ -1.16
HPS4-207ENST00000459918 A6NL46 340 aa7.79□□□□□ -1.16
HPS4-207ENST00000459918 TMCO5BA8MYB1 307 aa7.79□□□□□ -1.16
HPS4-207ENST00000459918 TOX3O15405 576 aaPredicted RBP7.79□□□□□ -1.16
HPS4-207ENST00000459918 GRID2O43424 1007 aa7.79□□□□□ -1.16
HPS4-207ENST00000459918 HTRA2O43464 458 aaPredicted RBP7.79□□□□□ -1.16
HPS4-207ENST00000459918 SPAG6O75602 509 aa7.79□□□□□ -1.16
HPS4-207ENST00000459918 SOD1P00441 154 aa7.79□□□□□ -1.16
HPS4-207ENST00000459918 ZNF30P17039 623 aa7.79□□□□□ -1.16
HPS4-207ENST00000459918 ELAVL4P26378 380 aaKnown RBP7.79□□□□□ -1.16
HPS4-207ENST00000459918 VARSP26640 1264 aaKnown RBP7.79□□□□□ -1.16
HPS4-207ENST00000459918 EEF1GP26641 437 aaKnown RBP7.79□□□□□ -1.16
HPS4-207ENST00000459918 LEPRP48357 1165 aaKnown RBP7.79□□□□□ -1.16
HPS4-207ENST00000459918 KLK7P49862 253 aa7.79□□□□□ -1.16
HPS4-207ENST00000459918 CDH6P55285 790 aa7.79□□□□□ -1.16
HPS4-207ENST00000459918 GSCP56915 257 aaPredicted RBP7.79□□□□□ -1.16
HPS4-207ENST00000459918 PTP4A2Q12974 167 aa7.79□□□□□ -1.16
HPS4-207ENST00000459918 NR6A1Q15406 480 aa7.79□□□□□ -1.16
HPS4-207ENST00000459918 UGT8Q16880 541 aa7.79□□□□□ -1.16
HPS4-207ENST00000459918 JMJD6Q6NYC1 403 aaPredicted RBP7.79□□□□□ -1.16
HPS4-207ENST00000459918 MON1BQ7L1V2 547 aa7.79□□□□□ -1.16
HPS4-207ENST00000459918 SYVN1Q86TM6 617 aa7.79□□□□□ -1.16
HPS4-207ENST00000459918 ARHGAP12Q8IWW6 846 aa7.79□□□□□ -1.16
HPS4-207ENST00000459918 RHOT1Q8IXI2 618 aa7.79□□□□□ -1.16
HPS4-207ENST00000459918 ZNF454Q8N9F8 522 aa7.79□□□□□ -1.16
HPS4-207ENST00000459918 SIDT2Q8NBJ9 832 aaKnown RBP7.79□□□□□ -1.16
HPS4-207ENST00000459918 NEK11Q8NG66 645 aa7.79□□□□□ -1.16
HPS4-207ENST00000459918 HSPH1Q92598 858 aa7.79□□□□□ -1.16
HPS4-207ENST00000459918 MR1Q95460 341 aa7.79□□□□□ -1.16
HPS4-207ENST00000459918 ZNF653Q96CK0 615 aa7.79□□□□□ -1.16
HPS4-207ENST00000459918 CXorf40BQ96DE9 158 aa7.79□□□□□ -1.16
HPS4-207ENST00000459918 SCARF2Q96GP6 870 aaPredicted RBP7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms