RNA–Protein interactions for RNA: ENST00000459854.5

UFD1-205, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best)

Gene UFD1, Length 5,038 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-205ENST00000459854 S100A13Q99584 98 aa9.72□□□□□ -0.85
UFD1-205ENST00000459854 AAASQ9NRG9 546 aa9.72□□□□□ -0.85
UFD1-205ENST00000459854 GIT1Q9Y2X7 761 aa9.72□□□□□ -0.85
UFD1-205ENST00000459854 GRIP1Q9Y3R0 1128 aa9.72□□□□□ -0.85
UFD1-205ENST00000459854 SIGLEC16A6NMB1 481 aa9.71□□□□□ -0.85
UFD1-205ENST00000459854 DPYSL4O14531 572 aa9.71□□□□□ -0.85
UFD1-205ENST00000459854 FADS2O95864 444 aaKnown RBP9.71□□□□□ -0.85
UFD1-205ENST00000459854 DARSP14868 501 aaKnown RBP9.71□□□□□ -0.85
UFD1-205ENST00000459854 NPR2P20594 1047 aa9.71□□□□□ -0.85
UFD1-205ENST00000459854 OXCT1P55809 520 aa9.71□□□□□ -0.85
UFD1-205ENST00000459854 DDX39BQ13838 428 aaKnown RBP9.71□□□□□ -0.85
UFD1-205ENST00000459854 NADK2Q4G0N4 442 aa9.71□□□□□ -0.85
UFD1-205ENST00000459854 ALFQ53S48 1182 aa9.71□□□□□ -0.85
UFD1-205ENST00000459854 NEPROQ6NW34 567 aa9.71□□□□□ -0.85
UFD1-205ENST00000459854 ZPBP2Q6X784 338 aa9.71□□□□□ -0.85
UFD1-205ENST00000459854 PHF13Q86YI8 300 aaPredicted RBP9.71□□□□□ -0.85
UFD1-205ENST00000459854 LPCAT1Q8NF37 534 aa9.71□□□□□ -0.85
UFD1-205ENST00000459854 KBTBD7Q8WVZ9 684 aa9.71□□□□□ -0.85
UFD1-205ENST00000459854 PIH1D2Q8WWB5 315 aa9.71□□□□□ -0.85
UFD1-205ENST00000459854 C16orf70Q9BSU1 422 aa9.71□□□□□ -0.85
UFD1-205ENST00000459854 TRPC4Q9UBN4 977 aa9.71□□□□□ -0.85
UFD1-205ENST00000459854 GTF2A1LQ9UNN4 478 aa9.71□□□□□ -0.85
UFD1-205ENST00000459854 F5H5T6 163 aa9.71□□□□□ -0.85
UFD1-205ENST00000459854 CLPXO76031 633 aa9.71□□□□□ -0.85
UFD1-205ENST00000459854 OTCP00480 354 aa9.71□□□□□ -0.85
UFD1-205ENST00000459854 S100A2P29034 98 aa9.71□□□□□ -0.85
UFD1-205ENST00000459854 CCL23P55773 120 aa9.71□□□□□ -0.85
UFD1-205ENST00000459854 MERTKQ12866 999 aa9.71□□□□□ -0.85
UFD1-205ENST00000459854 MARC1Q5VT66 337 aa9.71□□□□□ -0.85
UFD1-205ENST00000459854 OOSP2Q86WS3 158 aa9.71□□□□□ -0.85
UFD1-205ENST00000459854 HPS6Q86YV9 775 aa9.71□□□□□ -0.85
UFD1-205ENST00000459854 HS6ST3Q8IZP7 471 aa9.71□□□□□ -0.85
UFD1-205ENST00000459854 DNAJC5GQ8N7S2 189 aa9.71□□□□□ -0.85
UFD1-205ENST00000459854 BSNDQ8WZ55 320 aa9.71□□□□□ -0.85
UFD1-205ENST00000459854 RHBDF1Q96CC6 855 aa9.71□□□□□ -0.85
UFD1-205ENST00000459854 KCTD15Q96SI1 283 aaPredicted RBP9.71□□□□□ -0.85
UFD1-205ENST00000459854 CIB1Q99828 191 aa9.71□□□□□ -0.85
UFD1-205ENST00000459854 TARS2Q9BW92 718 aaKnown RBP9.71□□□□□ -0.85
UFD1-205ENST00000459854 GLS2Q9UI32 602 aa9.71□□□□□ -0.85
UFD1-205ENST00000459854 ZNF232Q9UNY5 417 aa9.71□□□□□ -0.85
UFD1-205ENST00000459854 GRIN2DO15399 1336 aa9.71□□□□□ -0.86
UFD1-205ENST00000459854 PRAMEF33A0A0G2JMD5 474 aa9.71□□□□□ -0.86
UFD1-205ENST00000459854 PRAMEF10O60809 474 aa9.71□□□□□ -0.86
UFD1-205ENST00000459854 SERPINB7O75635 380 aa9.71□□□□□ -0.86
UFD1-205ENST00000459854 TIPRLO75663 272 aa9.71□□□□□ -0.86
UFD1-205ENST00000459854 ODC1P11926 461 aa9.71□□□□□ -0.86
UFD1-205ENST00000459854 ZNF24P17028 368 aa9.71□□□□□ -0.86
UFD1-205ENST00000459854 CTGFP29279 349 aa9.71□□□□□ -0.86
UFD1-205ENST00000459854 MIIPQ5JXC2 388 aa9.71□□□□□ -0.86
UFD1-205ENST00000459854 LYPLAL1Q5VWZ2 237 aa9.71□□□□□ -0.86
UFD1-205ENST00000459854 ANKRD26P1Q6NSI1 321 aa9.71□□□□□ -0.86
UFD1-205ENST00000459854 GATAD2AQ86YP4 633 aa9.71□□□□□ -0.86
UFD1-205ENST00000459854 SLC9A9Q8IVB4 645 aa9.71□□□□□ -0.86
UFD1-205ENST00000459854 SMG8Q8ND04 991 aaKnown RBP9.71□□□□□ -0.86
UFD1-205ENST00000459854 FNDC8Q8TC99 324 aa9.71□□□□□ -0.86
UFD1-205ENST00000459854 ZNF670Q9BS34 389 aa9.71□□□□□ -0.86
UFD1-205ENST00000459854 RNF38Q9H0F5 515 aa9.71□□□□□ -0.86
UFD1-205ENST00000459854 CATSPERZQ9NTU4 200 aa9.71□□□□□ -0.86
UFD1-205ENST00000459854 TOR4AQ9NXH8 423 aa9.71□□□□□ -0.86
UFD1-205ENST00000459854 PNMA8BQ9ULN7 279 aaPredicted RBP9.71□□□□□ -0.86
UFD1-205ENST00000459854 MAGEB3O15480 346 aa9.71□□□□□ -0.86
UFD1-205ENST00000459854 C22orf31O95567 290 aa9.71□□□□□ -0.86
UFD1-205ENST00000459854 ITGB3P05106 788 aa9.71□□□□□ -0.86
UFD1-205ENST00000459854 TPSB2P20231 275 aa9.71□□□□□ -0.86
UFD1-205ENST00000459854 RFC2P35250 354 aa9.71□□□□□ -0.86
UFD1-205ENST00000459854 EIF2S3P41091 472 aaKnown RBP9.71□□□□□ -0.86
UFD1-205ENST00000459854 ALDH3A2P51648 485 aa9.71□□□□□ -0.86
UFD1-205ENST00000459854 TPSAB1Q15661 275 aa9.71□□□□□ -0.86
UFD1-205ENST00000459854 PIK3R6Q5UE93 754 aa9.71□□□□□ -0.86
UFD1-205ENST00000459854 GALNT12Q8IXK2 581 aa9.71□□□□□ -0.86
UFD1-205ENST00000459854 CPSF7Q8N684 471 aaKnown RBP9.71□□□□□ -0.86
UFD1-205ENST00000459854 KAT5Q92993 513 aa9.71□□□□□ -0.86
UFD1-205ENST00000459854 NSMCE3Q96MG7 304 aa9.71□□□□□ -0.86
UFD1-205ENST00000459854 NLNQ9BYT8 704 aa9.71□□□□□ -0.86
UFD1-205ENST00000459854 NXF3Q9H4D5 531 aaKnown RBP9.71□□□□□ -0.86
UFD1-205ENST00000459854 OGDHLQ9ULD0 1010 aa9.71□□□□□ -0.86
UFD1-205ENST00000459854 FAM47E-STBD1D6RA91 191 aa9.7□□□□□ -0.86
UFD1-205ENST00000459854 UPP2O95045 317 aa9.7□□□□□ -0.86
UFD1-205ENST00000459854 C7P10643 843 aa9.7□□□□□ -0.86
UFD1-205ENST00000459854 FECHP22830 423 aa9.7□□□□□ -0.86
UFD1-205ENST00000459854 CHKAP35790 457 aa9.7□□□□□ -0.86
UFD1-205ENST00000459854 MTHFRP42898 656 aa9.7□□□□□ -0.86
UFD1-205ENST00000459854 TMBIM6P55061 237 aa9.7□□□□□ -0.86
UFD1-205ENST00000459854 S100A12P80511 92 aa9.7□□□□□ -0.86
UFD1-205ENST00000459854 ZNF45Q02386 682 aa9.7□□□□□ -0.86
UFD1-205ENST00000459854 RFTN2Q52LD8 501 aaPredicted RBP9.7□□□□□ -0.86
UFD1-205ENST00000459854 SLC27A1Q6PCB7 646 aa9.7□□□□□ -0.86
UFD1-205ENST00000459854 SLC39A5Q6ZMH5 540 aa9.7□□□□□ -0.86
UFD1-205ENST00000459854 TMEM17Q86X19 198 aa9.7□□□□□ -0.86
UFD1-205ENST00000459854 LPGAT1Q92604 370 aa9.7□□□□□ -0.86
UFD1-205ENST00000459854 PPP1R14AQ96A00 147 aa9.7□□□□□ -0.86
UFD1-205ENST00000459854 RCOR3Q9P2K3 495 aaPredicted RBP9.7□□□□□ -0.86
UFD1-205ENST00000459854 GREB1LQ9C091 1923 aaPredicted RBP9.7□□□□□ -0.86
UFD1-205ENST00000459854 SH3PXD2BA1X283 911 aa9.7□□□□□ -0.86
UFD1-205ENST00000459854 FGF10O15520 208 aaPredicted RBP9.7□□□□□ -0.86
UFD1-205ENST00000459854 ADAMTS4O75173 837 aa9.7□□□□□ -0.86
UFD1-205ENST00000459854 C9P02748 559 aa9.7□□□□□ -0.86
UFD1-205ENST00000459854 RPN2P04844 631 aa9.7□□□□□ -0.86
UFD1-205ENST00000459854 NFICP08651 508 aa9.7□□□□□ -0.86
UFD1-205ENST00000459854 CCNFP41002 786 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms