RNA–Protein interactions for RNA: ENST00000459639.5

U2AF1-204, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-204ENST00000459639 OAS3Q9Y6K5 1087 aaKnown RBP24.24■■□□□ 1.47
U2AF1-204ENST00000459639 GOLGA8CPA6NN73 597 aa24.23■■□□□ 1.47
U2AF1-204ENST00000459639 RNASEH1O60930 286 aaKnown RBP24.23■■□□□ 1.47
U2AF1-204ENST00000459639 GLRBP48167 497 aa24.23■■□□□ 1.47
U2AF1-204ENST00000459639 PON2Q15165 354 aa24.23■■□□□ 1.47
U2AF1-204ENST00000459639 CHI3L2Q15782 390 aa24.23■■□□□ 1.47
U2AF1-204ENST00000459639 ATP13A5Q4VNC0 1218 aa24.23■■□□□ 1.47
U2AF1-204ENST00000459639 GKAP1Q5VSY0 366 aaPredicted RBP24.23■■□□□ 1.47
U2AF1-204ENST00000459639 TECPR1Q7Z6L1 1165 aa24.23■■□□□ 1.47
U2AF1-204ENST00000459639 TMEM151AQ8N4L1 468 aa24.23■■□□□ 1.47
U2AF1-204ENST00000459639 ANKRD49Q8WVL7 239 aa24.23■■□□□ 1.47
U2AF1-204ENST00000459639 MSANTD3Q96H12 275 aa24.23■■□□□ 1.47
U2AF1-204ENST00000459639 GABRG3Q99928 467 aa24.23■■□□□ 1.47
U2AF1-204ENST00000459639 MRPL57Q9BQC6 102 aaKnown RBP24.23■■□□□ 1.47
U2AF1-204ENST00000459639 MRPL46Q9H2W6 279 aaKnown RBP24.23■■□□□ 1.47
U2AF1-204ENST00000459639 SLCO1B3Q9NPD5 702 aa24.23■■□□□ 1.47
U2AF1-204ENST00000459639 ZDHHC3Q9NYG2 299 aa24.23■■□□□ 1.47
U2AF1-204ENST00000459639 XPR1Q9UBH6 696 aa24.23■■□□□ 1.47
U2AF1-204ENST00000459639 GNPTGQ9UJJ9 305 aa24.23■■□□□ 1.47
U2AF1-204ENST00000459639 G3V2L1 256 aa24.22■■□□□ 1.47
U2AF1-204ENST00000459639 TK2O00142 265 aa24.22■■□□□ 1.47
U2AF1-204ENST00000459639 SYNCRIPO60506 623 aaKnown RBP24.22■■□□□ 1.47
U2AF1-204ENST00000459639 EGFP01133 1207 aa24.22■■□□□ 1.47
U2AF1-204ENST00000459639 GLULP15104 373 aa24.22■■□□□ 1.47
U2AF1-204ENST00000459639 FOSL2P15408 326 aa24.22■■□□□ 1.47
U2AF1-204ENST00000459639 NTSR1P30989 418 aa24.22■■□□□ 1.47
U2AF1-204ENST00000459639 ETV3P41162 512 aa24.22■■□□□ 1.47
U2AF1-204ENST00000459639 PFKPQ01813 784 aa24.22■■□□□ 1.47
U2AF1-204ENST00000459639 GRSF1Q12849 480 aaKnown RBP eCLIP24.22■■□□□ 1.47
U2AF1-204ENST00000459639 ACAP2Q15057 778 aa24.22■■□□□ 1.47
U2AF1-204ENST00000459639 ZYG11AQ6WRX3 759 aa24.22■■□□□ 1.47
U2AF1-204ENST00000459639 Q6ZVL8 140 aa24.22■■□□□ 1.47
U2AF1-204ENST00000459639 PIGWQ7Z7B1 504 aa24.22■■□□□ 1.47
U2AF1-204ENST00000459639 C10orf107Q8IVU9 208 aa24.22■■□□□ 1.47
U2AF1-204ENST00000459639 NRSN1Q8IZ57 195 aa24.22■■□□□ 1.47
U2AF1-204ENST00000459639 CD84Q9UIB8 345 aa24.22■■□□□ 1.47
U2AF1-204ENST00000459639 FAM50BQ9Y247 325 aa24.22■■□□□ 1.47
U2AF1-204ENST00000459639 TARM1B6A8C7 271 aa24.21■■□□□ 1.47
U2AF1-204ENST00000459639 H3BMM5 538 aa24.21■■□□□ 1.47
U2AF1-204ENST00000459639 NIPSNAP2O75323 286 aa24.21■■□□□ 1.47
U2AF1-204ENST00000459639 ADH1BP00325 375 aa24.21■■□□□ 1.47
U2AF1-204ENST00000459639 MYL2P10916 166 aa24.21■■□□□ 1.47
U2AF1-204ENST00000459639 KCNA4P22459 653 aa24.21■■□□□ 1.47
U2AF1-204ENST00000459639 SKIV2L2P42285 1042 aaKnown RBP24.21■■□□□ 1.47
U2AF1-204ENST00000459639 LEXMQ3ZCV2 418 aa24.21■■□□□ 1.47
U2AF1-204ENST00000459639 TMEM52BQ4KMG9 183 aa24.21■■□□□ 1.47
U2AF1-204ENST00000459639 SETMARQ53H47 684 aaPredicted RBP24.21■■□□□ 1.47
U2AF1-204ENST00000459639 TECRLQ5HYJ1 363 aa24.21■■□□□ 1.47
U2AF1-204ENST00000459639 HENMT1Q5T8I9 393 aaKnown RBP24.21■■□□□ 1.47
U2AF1-204ENST00000459639 SDE2Q6IQ49 451 aa24.21■■□□□ 1.47
U2AF1-204ENST00000459639 UGT3A1Q6NUS8 523 aa24.21■■□□□ 1.47
U2AF1-204ENST00000459639 GPR153Q6NV75 609 aa24.21■■□□□ 1.47
U2AF1-204ENST00000459639 SPATA6LQ8N4H0 392 aa24.21■■□□□ 1.47
U2AF1-204ENST00000459639 TRAM1L1Q8N609 369 aa24.21■■□□□ 1.47
U2AF1-204ENST00000459639 SREK1Q8WXA9 508 aaKnown RBP24.21■■□□□ 1.47
U2AF1-204ENST00000459639 GPR21Q99679 349 aa24.21■■□□□ 1.47
U2AF1-204ENST00000459639 ZSCAN5AQ9BUG6 496 aa24.21■■□□□ 1.47
U2AF1-204ENST00000459639 TSSK1BQ9BXA7 367 aa24.21■■□□□ 1.47
U2AF1-204ENST00000459639 SPATA16Q9BXB7 569 aa24.21■■□□□ 1.47
U2AF1-204ENST00000459639 FBRSQ9HAH7 460 aa24.21■■□□□ 1.47
U2AF1-204ENST00000459639 TRMT6Q9UJA5 497 aaKnown RBP24.21■■□□□ 1.47
U2AF1-204ENST00000459639 E5RI56 91 aa24.21■■□□□ 1.47
U2AF1-204ENST00000459639 RBP1P09455 135 aa24.21■■□□□ 1.47
U2AF1-204ENST00000459639 SBK3P0C264 359 aa24.21■■□□□ 1.47
U2AF1-204ENST00000459639 FGF3P11487 239 aaPredicted RBP24.21■■□□□ 1.47
U2AF1-204ENST00000459639 P2RY2P41231 377 aa24.21■■□□□ 1.47
U2AF1-204ENST00000459639 LIG3P49916 1009 aa24.21■■□□□ 1.47
U2AF1-204ENST00000459639 SATB1Q01826 763 aa24.21■■□□□ 1.47
U2AF1-204ENST00000459639 ACOX1Q15067 660 aa24.21■■□□□ 1.47
U2AF1-204ENST00000459639 CST6Q15828 149 aa24.21■■□□□ 1.47
U2AF1-204ENST00000459639 PRPF38BQ5VTL8 546 aaKnown RBP24.21■■□□□ 1.47
U2AF1-204ENST00000459639 Q7L0L9 218 aa24.21■■□□□ 1.47
U2AF1-204ENST00000459639 ZNF771Q7L3S4 317 aaPredicted RBP24.21■■□□□ 1.47
U2AF1-204ENST00000459639 CYP2U1Q7Z449 544 aa24.21■■□□□ 1.47
U2AF1-204ENST00000459639 TRMT11Q7Z4G4 463 aaKnown RBP24.21■■□□□ 1.47
U2AF1-204ENST00000459639 PPP1R14CQ8TAE6 165 aa24.21■■□□□ 1.47
U2AF1-204ENST00000459639 PPM1EQ8WY54 764 aa24.21■■□□□ 1.47
U2AF1-204ENST00000459639 COQ10AQ96MF6 247 aa24.21■■□□□ 1.47
U2AF1-204ENST00000459639 COPS8Q99627 209 aa24.21■■□□□ 1.47
U2AF1-204ENST00000459639 BOCQ9BWV1 1114 aa24.21■■□□□ 1.47
U2AF1-204ENST00000459639 CPSF2Q9P2I0 782 aaKnown RBP24.21■■□□□ 1.47
U2AF1-204ENST00000459639 MTF2Q9Y483 593 aaPredicted RBP24.21■■□□□ 1.47
U2AF1-204ENST00000459639 MYO10Q9HD67 2058 aa24.2■■□□□ 1.46
U2AF1-204ENST00000459639 IGLV3-16A0A075B6K0 115 aa24.2■■□□□ 1.46
U2AF1-204ENST00000459639 PLK4O00444 970 aa24.2■■□□□ 1.46
U2AF1-204ENST00000459639 ASGR2P07307 311 aa24.2■■□□□ 1.46
U2AF1-204ENST00000459639 NSG1P42857 185 aa24.2■■□□□ 1.46
U2AF1-204ENST00000459639 BST1Q10588 318 aa24.2■■□□□ 1.46
U2AF1-204ENST00000459639 CNTN1Q12860 1018 aa24.2■■□□□ 1.46
U2AF1-204ENST00000459639 STARD3Q14849 445 aa24.2■■□□□ 1.46
U2AF1-204ENST00000459639 ZNF284Q2VY69 593 aa24.2■■□□□ 1.46
U2AF1-204ENST00000459639 PTRHD1Q6GMV3 140 aaKnown RBP24.2■■□□□ 1.46
U2AF1-204ENST00000459639 OTOAQ7RTW8 1153 aa24.2■■□□□ 1.46
U2AF1-204ENST00000459639 OR2T3Q8NH03 318 aa24.2■■□□□ 1.46
U2AF1-204ENST00000459639 SCAMP4Q969E2 229 aa24.2■■□□□ 1.46
U2AF1-204ENST00000459639 ELAC2Q9BQ52 826 aaKnown RBP24.2■■□□□ 1.46
U2AF1-204ENST00000459639 WRAP53Q9BUR4 548 aaKnown RBP24.2■■□□□ 1.46
U2AF1-204ENST00000459639 PIKFYVEQ9Y2I7 2098 aa24.2■■□□□ 1.46
U2AF1-204ENST00000459639 WNT9AO14904 365 aa24.19■■□□□ 1.46
U2AF1-204ENST00000459639 SNX3O60493 162 aa24.19■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms