RNA–Protein interactions for RNA: ENST00000455546.6

GTF3C3-208, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 4

Gene GTF3C3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-208ENST00000455546 STX1AQ16623 288 aa4.7□□□□□ -1.66
GTF3C3-208ENST00000455546 SMTNL2Q2TAL5 461 aa4.7□□□□□ -1.66
GTF3C3-208ENST00000455546 ZSCAN23Q3MJ62 389 aa4.7□□□□□ -1.66
GTF3C3-208ENST00000455546 BBS9Q3SYG4 887 aa4.7□□□□□ -1.66
GTF3C3-208ENST00000455546 PARP15Q460N3 678 aa4.7□□□□□ -1.66
GTF3C3-208ENST00000455546 ANO6Q4KMQ2 910 aa4.7□□□□□ -1.66
GTF3C3-208ENST00000455546 CFAP58Q5T655 872 aa4.7□□□□□ -1.66
GTF3C3-208ENST00000455546 BROXQ5VW32 411 aa4.7□□□□□ -1.66
GTF3C3-208ENST00000455546 AFMIDQ63HM1 303 aa4.7□□□□□ -1.66
GTF3C3-208ENST00000455546 E4F1Q66K89 784 aaPredicted RBP4.7□□□□□ -1.66
GTF3C3-208ENST00000455546 TXNRD3NBQ6F5E7 133 aa4.7□□□□□ -1.66
GTF3C3-208ENST00000455546 PLEKHA7Q6IQ23 1121 aa4.7□□□□□ -1.66
GTF3C3-208ENST00000455546 ESRP1Q6NXG1 681 aaKnown RBP4.7□□□□□ -1.66
GTF3C3-208ENST00000455546 ERAP2Q6P179 960 aa4.7□□□□□ -1.66
GTF3C3-208ENST00000455546 LIPIQ6XZB0 460 aa4.7□□□□□ -1.66
GTF3C3-208ENST00000455546 MACC1Q6ZN28 852 aa4.7□□□□□ -1.66
GTF3C3-208ENST00000455546 RFLNAQ6ZTI6 216 aa4.7□□□□□ -1.66
GTF3C3-208ENST00000455546 RFX8Q6ZV50 586 aa4.7□□□□□ -1.66
GTF3C3-208ENST00000455546 CYP4V2Q6ZWL3 525 aaPredicted RBP4.7□□□□□ -1.66
GTF3C3-208ENST00000455546 USP53Q70EK8 1073 aa4.7□□□□□ -1.66
GTF3C3-208ENST00000455546 ZNF571Q7Z3V5 609 aaPredicted RBP4.7□□□□□ -1.66
GTF3C3-208ENST00000455546 TMPRSS9Q7Z410 1059 aa4.7□□□□□ -1.66
GTF3C3-208ENST00000455546 TAF8Q7Z7C8 310 aa4.7□□□□□ -1.66
GTF3C3-208ENST00000455546 ZAR1Q86SH2 424 aa4.7□□□□□ -1.66
GTF3C3-208ENST00000455546 ZNF605Q86T29 641 aa4.7□□□□□ -1.66
GTF3C3-208ENST00000455546 ARHGAP12Q8IWW6 846 aa4.7□□□□□ -1.66
GTF3C3-208ENST00000455546 SDR16C5Q8N3Y7 309 aa4.7□□□□□ -1.66
GTF3C3-208ENST00000455546 PGBD5Q8N414 524 aa4.7□□□□□ -1.66
GTF3C3-208ENST00000455546 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.7□□□□□ -1.66
GTF3C3-208ENST00000455546 NPWQ8N729 165 aa4.7□□□□□ -1.66
GTF3C3-208ENST00000455546 PAF1Q8N7H5 531 aa4.7□□□□□ -1.66
GTF3C3-208ENST00000455546 FAM46DQ8NEK8 389 aa4.7□□□□□ -1.66
GTF3C3-208ENST00000455546 PDCD6IPQ8WUM4 868 aaKnown RBP4.7□□□□□ -1.66
GTF3C3-208ENST00000455546 RNF141Q8WVD5 230 aa4.7□□□□□ -1.66
GTF3C3-208ENST00000455546 CASKIN2Q8WXE0 1202 aa4.7□□□□□ -1.66
GTF3C3-208ENST00000455546 OR1E3Q8WZA6 343 aa4.7□□□□□ -1.66
GTF3C3-208ENST00000455546 HSPH1Q92598 858 aa4.7□□□□□ -1.66
GTF3C3-208ENST00000455546 PDXPQ96GD0 296 aa4.7□□□□□ -1.66
GTF3C3-208ENST00000455546 Q96M66 194 aa4.7□□□□□ -1.66
GTF3C3-208ENST00000455546 ZNF641Q96N77 438 aaPredicted RBP4.7□□□□□ -1.66
GTF3C3-208ENST00000455546 SMIM14Q96QK8 99 aa4.7□□□□□ -1.66
GTF3C3-208ENST00000455546 CINPQ9BW66 212 aaPredicted RBP4.7□□□□□ -1.66
GTF3C3-208ENST00000455546 C1QTNF7Q9BXJ2 289 aa4.7□□□□□ -1.66
GTF3C3-208ENST00000455546 KLHL25Q9H0H3 589 aa4.7□□□□□ -1.66
GTF3C3-208ENST00000455546 TMEM168Q9H0V1 697 aa4.7□□□□□ -1.66
GTF3C3-208ENST00000455546 LRRN3Q9H3W5 708 aa4.7□□□□□ -1.66
GTF3C3-208ENST00000455546 ZWILCHQ9H900 591 aa4.7□□□□□ -1.66
GTF3C3-208ENST00000455546 SP110Q9HB58 689 aa4.7□□□□□ -1.66
GTF3C3-208ENST00000455546 USP29Q9HBJ7 922 aa4.7□□□□□ -1.66
GTF3C3-208ENST00000455546 EPB41L5Q9HCM4 733 aa4.7□□□□□ -1.66
GTF3C3-208ENST00000455546 THSD1Q9NS62 852 aa4.7□□□□□ -1.66
GTF3C3-208ENST00000455546 SPATS2LQ9NUQ6 558 aaKnown RBP4.7□□□□□ -1.66
GTF3C3-208ENST00000455546 PARVAQ9NVD7 372 aa4.7□□□□□ -1.66
GTF3C3-208ENST00000455546 ETNK2Q9NVF9 386 aa4.7□□□□□ -1.66
GTF3C3-208ENST00000455546 CWC15Q9P013 229 aaKnown RBP4.7□□□□□ -1.66
GTF3C3-208ENST00000455546 KLQ9UEF7 1012 aa4.7□□□□□ -1.66
GTF3C3-208ENST00000455546 CNOT8Q9UFF9 292 aaKnown RBP4.7□□□□□ -1.66
GTF3C3-208ENST00000455546 ATP8A1Q9Y2Q0 1164 aa4.7□□□□□ -1.66
GTF3C3-208ENST00000455546 PLEKHM1Q9Y4G2 1056 aa4.7□□□□□ -1.66
GTF3C3-208ENST00000455546 TRBV23OR9-2A0A075B6M9 112 aa4.69□□□□□ -1.66
GTF3C3-208ENST00000455546 TEX51A0A1B0GUA7 166 aa4.69□□□□□ -1.66
GTF3C3-208ENST00000455546 ESYT3A0FGR9 886 aa4.69□□□□□ -1.66
GTF3C3-208ENST00000455546 TSPAN11A1L157 253 aa4.69□□□□□ -1.66
GTF3C3-208ENST00000455546 TMEM110-MUSTN1A8MSY1 372 aa4.69□□□□□ -1.66
GTF3C3-208ENST00000455546 CDRT15L2A8MXV6 281 aa4.69□□□□□ -1.66
GTF3C3-208ENST00000455546 B4DGG1 531 aa4.69□□□□□ -1.66
GTF3C3-208ENST00000455546 NTN3O00634 580 aaPredicted RBP4.69□□□□□ -1.66
GTF3C3-208ENST00000455546 PLD2O14939 933 aa4.69□□□□□ -1.66
GTF3C3-208ENST00000455546 FGF10O15520 208 aaPredicted RBP4.69□□□□□ -1.66
GTF3C3-208ENST00000455546 B4GAT1O43505 415 aa4.69□□□□□ -1.66
GTF3C3-208ENST00000455546 PRPSAP2O60256 369 aa4.69□□□□□ -1.66
GTF3C3-208ENST00000455546 NOBOXO60393 691 aa4.69□□□□□ -1.66
GTF3C3-208ENST00000455546 LRCH4O75427 683 aa4.69□□□□□ -1.66
GTF3C3-208ENST00000455546 RNF8O76064 485 aa4.69□□□□□ -1.66
GTF3C3-208ENST00000455546 ALPIP09923 528 aa4.69□□□□□ -1.66
GTF3C3-208ENST00000455546 CCDC172P0C7W6 258 aa4.69□□□□□ -1.66
GTF3C3-208ENST00000455546 CTPS1P17812 591 aa4.69□□□□□ -1.66
GTF3C3-208ENST00000455546 ITIH1P19827 911 aa4.69□□□□□ -1.66
GTF3C3-208ENST00000455546 AK4P27144 223 aaPredicted RBP4.69□□□□□ -1.66
GTF3C3-208ENST00000455546 SERPINA4P29622 427 aa4.69□□□□□ -1.66
GTF3C3-208ENST00000455546 UGT1A5P35504 534 aa4.69□□□□□ -1.66
GTF3C3-208ENST00000455546 ANP32AP39687 249 aaKnown RBP4.69□□□□□ -1.66
GTF3C3-208ENST00000455546 MMP12P39900 470 aa4.69□□□□□ -1.66
GTF3C3-208ENST00000455546 CSNK1DP48730 415 aa4.69□□□□□ -1.66
GTF3C3-208ENST00000455546 POLD2P49005 469 aa4.69□□□□□ -1.66
GTF3C3-208ENST00000455546 BLKP51451 505 aa4.69□□□□□ -1.66
GTF3C3-208ENST00000455546 AIF1P55008 147 aa4.69□□□□□ -1.66
GTF3C3-208ENST00000455546 MAZP56270 477 aaKnown RBP4.69□□□□□ -1.66
GTF3C3-208ENST00000455546 TMPRSS3P57727 454 aa4.69□□□□□ -1.66
GTF3C3-208ENST00000455546 OR1D5P58170 312 aa4.69□□□□□ -1.66
GTF3C3-208ENST00000455546 CFHR1Q03591 330 aa4.69□□□□□ -1.66
GTF3C3-208ENST00000455546 IL10RBQ08334 325 aa4.69□□□□□ -1.66
GTF3C3-208ENST00000455546 NSUN2Q08J23 767 aaKnown RBP eCLIP4.69□□□□□ -1.66
GTF3C3-208ENST00000455546 MTM1Q13496 603 aa4.69□□□□□ -1.66
GTF3C3-208ENST00000455546 NFATC4Q14934 902 aa4.69□□□□□ -1.66
GTF3C3-208ENST00000455546 ASIC2Q16515 512 aa4.69□□□□□ -1.66
GTF3C3-208ENST00000455546 AMZ1Q400G9 498 aa4.69□□□□□ -1.66
GTF3C3-208ENST00000455546 ATP13A4Q4VNC1 1196 aa4.69□□□□□ -1.66
GTF3C3-208ENST00000455546 SFRP5Q5T4F7 317 aa4.69□□□□□ -1.66
GTF3C3-208ENST00000455546 PNCKQ6P2M8 343 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms