RNA–Protein interactions for RNA: ENST00000454468.5

SMPD4-213, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 3,586 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-213ENST00000454468 MSLNQ13421 630 aaPredicted RBP11.9□□□□□ -0.5
SMPD4-213ENST00000454468 SQLEQ14534 574 aa11.9□□□□□ -0.5
SMPD4-213ENST00000454468 ZNF678Q5SXM1 525 aa11.9□□□□□ -0.5
SMPD4-213ENST00000454468 AFTPHQ6ULP2 937 aa11.9□□□□□ -0.5
SMPD4-213ENST00000454468 PDZD8Q8NEN9 1154 aa11.9□□□□□ -0.5
SMPD4-213ENST00000454468 MDGA1Q8NFP4 955 aa11.9□□□□□ -0.5
SMPD4-213ENST00000454468 CASD1Q96PB1 797 aa11.9□□□□□ -0.5
SMPD4-213ENST00000454468 KLQ9UEF7 1012 aa11.9□□□□□ -0.5
SMPD4-213ENST00000454468 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.9□□□□□ -0.5
SMPD4-213ENST00000454468 PSMD13Q9UNM6 376 aa11.9□□□□□ -0.5
SMPD4-213ENST00000454468 YIPF1Q9Y548 306 aa11.9□□□□□ -0.5
SMPD4-213ENST00000454468 SIP14410 1827 aa11.9□□□□□ -0.5
SMPD4-213ENST00000454468 NUP214P35658 2090 aaPredicted RBP11.9□□□□□ -0.5
SMPD4-213ENST00000454468 hCG_2014768A0A024R1R8 64 aa11.9□□□□□ -0.5
SMPD4-213ENST00000454468 A0A1W2PRU2 124 aa11.9□□□□□ -0.5
SMPD4-213ENST00000454468 ANKRD66B4E2M5 251 aa11.9□□□□□ -0.5
SMPD4-213ENST00000454468 TRIM38O00635 465 aa11.9□□□□□ -0.5
SMPD4-213ENST00000454468 UBFD1O14562 309 aaKnown RBP11.9□□□□□ -0.5
SMPD4-213ENST00000454468 PRAMEF1O95521 474 aa11.9□□□□□ -0.5
SMPD4-213ENST00000454468 BMP1P13497 986 aa11.9□□□□□ -0.5
SMPD4-213ENST00000454468 STC1P52823 247 aa11.9□□□□□ -0.5
SMPD4-213ENST00000454468 CDH4P55283 916 aa11.9□□□□□ -0.5
SMPD4-213ENST00000454468 CPSF6Q16630 551 aaKnown RBP eCLIP11.9□□□□□ -0.5
SMPD4-213ENST00000454468 CYP51A1Q16850 503 aa11.9□□□□□ -0.5
SMPD4-213ENST00000454468 ADGRF1Q5T601 910 aa11.9□□□□□ -0.5
SMPD4-213ENST00000454468 HERC6Q8IVU3 1022 aa11.9□□□□□ -0.5
SMPD4-213ENST00000454468 FEM1CQ96JP0 617 aa11.9□□□□□ -0.5
SMPD4-213ENST00000454468 SLC30A3Q99726 388 aa11.9□□□□□ -0.5
SMPD4-213ENST00000454468 TMEM79Q9BSE2 394 aa11.9□□□□□ -0.5
SMPD4-213ENST00000454468 DNAJC15Q9Y5T4 150 aa11.9□□□□□ -0.5
SMPD4-213ENST00000454468 PDLIM1O00151 329 aa11.89□□□□□ -0.51
SMPD4-213ENST00000454468 HOXA2O43364 376 aa11.89□□□□□ -0.51
SMPD4-213ENST00000454468 CLDN7O95471 211 aa11.89□□□□□ -0.51
SMPD4-213ENST00000454468 PBLDP30039 288 aaPredicted RBP11.89□□□□□ -0.51
SMPD4-213ENST00000454468 DPP6P42658 865 aa11.89□□□□□ -0.51
SMPD4-213ENST00000454468 MAPKAPK2P49137 400 aa11.89□□□□□ -0.51
SMPD4-213ENST00000454468 HERVK_113P63132 956 aa11.89□□□□□ -0.51
SMPD4-213ENST00000454468 PPP1R8Q12972 351 aaKnown RBP11.89□□□□□ -0.51
SMPD4-213ENST00000454468 RABL3Q5HYI8 236 aa11.89□□□□□ -0.51
SMPD4-213ENST00000454468 ZBTB46Q86UZ6 589 aa11.89□□□□□ -0.51
SMPD4-213ENST00000454468 TMEM74Q96NL1 305 aa11.89□□□□□ -0.51
SMPD4-213ENST00000454468 ERVK-6Q9BXR3 956 aa11.89□□□□□ -0.51
SMPD4-213ENST00000454468 A0A0G2JMZ2 1700 aa11.89□□□□□ -0.51
SMPD4-213ENST00000454468 A0A1B0GTL3 188 aa11.89□□□□□ -0.51
SMPD4-213ENST00000454468 SLC25A14O95258 325 aaPredicted RBP11.89□□□□□ -0.51
SMPD4-213ENST00000454468 UQCRBP14927 111 aa11.89□□□□□ -0.51
SMPD4-213ENST00000454468 CD1DP15813 335 aa11.89□□□□□ -0.51
SMPD4-213ENST00000454468 RECQLP46063 649 aaPredicted RBP11.89□□□□□ -0.51
SMPD4-213ENST00000454468 TM4SF4P48230 202 aa11.89□□□□□ -0.51
SMPD4-213ENST00000454468 STK19P49842 368 aaPredicted RBP11.89□□□□□ -0.51
SMPD4-213ENST00000454468 PFKPQ01813 784 aa11.89□□□□□ -0.51
SMPD4-213ENST00000454468 ZNF33AQ06730 810 aa11.89□□□□□ -0.51
SMPD4-213ENST00000454468 TRAF2Q12933 501 aa11.89□□□□□ -0.51
SMPD4-213ENST00000454468 GK3PQ14409 553 aa11.89□□□□□ -0.51
SMPD4-213ENST00000454468 UGT3A1Q6NUS8 523 aa11.89□□□□□ -0.51
SMPD4-213ENST00000454468 AAGABQ6PD74 315 aa11.89□□□□□ -0.51
SMPD4-213ENST00000454468 ANGPTL8Q6UXH0 198 aa11.89□□□□□ -0.51
SMPD4-213ENST00000454468 EZH1Q92800 747 aaPredicted RBP11.89□□□□□ -0.51
SMPD4-213ENST00000454468 AARSD1Q9BTE6 412 aaKnown RBP11.89□□□□□ -0.51
SMPD4-213ENST00000454468 PAPOLBQ9NRJ5 636 aaKnown RBP11.89□□□□□ -0.51
SMPD4-213ENST00000454468 KANSL1LA0AUZ9 987 aa11.89□□□□□ -0.51
SMPD4-213ENST00000454468 SYCE1LA8MT33 242 aa11.89□□□□□ -0.51
SMPD4-213ENST00000454468 AXIN1O15169 862 aa11.89□□□□□ -0.51
SMPD4-213ENST00000454468 SMAD6O43541 496 aaKnown RBP11.89□□□□□ -0.51
SMPD4-213ENST00000454468 IL10P22301 178 aa11.89□□□□□ -0.51
SMPD4-213ENST00000454468 HTR7P34969 479 aa11.89□□□□□ -0.51
SMPD4-213ENST00000454468 MAPK10P53779 464 aa11.89□□□□□ -0.51
SMPD4-213ENST00000454468 TRIM71Q2Q1W2 868 aaKnown RBP11.89□□□□□ -0.51
SMPD4-213ENST00000454468 ZNF296Q8WUU4 475 aaPredicted RBP11.89□□□□□ -0.51
SMPD4-213ENST00000454468 CCDC28BQ9BUN5 200 aa11.89□□□□□ -0.51
SMPD4-213ENST00000454468 BOCQ9BWV1 1114 aa11.89□□□□□ -0.51
SMPD4-213ENST00000454468 DDX18Q9NVP1 670 aaKnown RBP11.89□□□□□ -0.51
SMPD4-213ENST00000454468 CACNA2D2Q9NY47 1150 aa11.89□□□□□ -0.51
SMPD4-213ENST00000454468 NEU3Q9UQ49 428 aa11.89□□□□□ -0.51
SMPD4-213ENST00000454468 C15orf38-AP3S2A0A0A6YYH1 394 aa11.88□□□□□ -0.51
SMPD4-213ENST00000454468 CCDC154A6NI56 674 aa11.88□□□□□ -0.51
SMPD4-213ENST00000454468 PRAMEF12O95522 483 aa11.88□□□□□ -0.51
SMPD4-213ENST00000454468 CCNG1P51959 295 aa11.88□□□□□ -0.51
SMPD4-213ENST00000454468 ZIK1Q3SY52 487 aaPredicted RBP11.88□□□□□ -0.51
SMPD4-213ENST00000454468 ATP6AP1LQ52LC2 224 aa11.88□□□□□ -0.51
SMPD4-213ENST00000454468 ARPINQ7Z6K5 226 aa11.88□□□□□ -0.51
SMPD4-213ENST00000454468 CMTM8Q8IZV2 173 aa11.88□□□□□ -0.51
SMPD4-213ENST00000454468 APCDD1Q8J025 514 aa11.88□□□□□ -0.51
SMPD4-213ENST00000454468 ZNF786Q8N393 782 aa11.88□□□□□ -0.51
SMPD4-213ENST00000454468 OR52B6Q8NGF0 335 aa11.88□□□□□ -0.51
SMPD4-213ENST00000454468 CANT1Q8WVQ1 401 aa11.88□□□□□ -0.51
SMPD4-213ENST00000454468 PYCR2Q96C36 320 aa11.88□□□□□ -0.51
SMPD4-213ENST00000454468 ZNF558Q96NG5 402 aa11.88□□□□□ -0.51
SMPD4-213ENST00000454468 C17orf80Q9BSJ5 609 aa11.88□□□□□ -0.51
SMPD4-213ENST00000454468 GSTO2Q9H4Y5 243 aa11.88□□□□□ -0.51
SMPD4-213ENST00000454468 PRPF19Q9UMS4 504 aaKnown RBP11.88□□□□□ -0.51
SMPD4-213ENST00000454468 PRORSD1PA6NEY8 169 aa11.88□□□□□ -0.51
SMPD4-213ENST00000454468 MAP3K13O43283 966 aa11.88□□□□□ -0.51
SMPD4-213ENST00000454468 LRATO95237 230 aa11.88□□□□□ -0.51
SMPD4-213ENST00000454468 CLPTM1O96005 669 aa11.88□□□□□ -0.51
SMPD4-213ENST00000454468 PEX11BO96011 259 aa11.88□□□□□ -0.51
SMPD4-213ENST00000454468 UGT2B4P06133 528 aa11.88□□□□□ -0.51
SMPD4-213ENST00000454468 CAPN1P07384 714 aa11.88□□□□□ -0.51
SMPD4-213ENST00000454468 ITGALP20701 1170 aa11.88□□□□□ -0.51
SMPD4-213ENST00000454468 MAGEA12P43365 314 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms