RNA–Protein interactions for RNA: ENST00000453453.1

SNX17-204, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,638 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-204ENST00000453453 ELAVL3Q14576 367 aaKnown RBP15.79■□□□□ 0.12
SNX17-204ENST00000453453 TBC1D25Q3MII6 688 aa15.79■□□□□ 0.12
SNX17-204ENST00000453453 BRAT1Q6PJG6 821 aa15.79■□□□□ 0.12
SNX17-204ENST00000453453 TRMT11Q7Z4G4 463 aaKnown RBP15.79■□□□□ 0.12
SNX17-204ENST00000453453 TMEM135Q86UB9 458 aa15.79■□□□□ 0.12
SNX17-204ENST00000453453 CHPFQ8IZ52 775 aa15.79■□□□□ 0.12
SNX17-204ENST00000453453 CATSPER1Q8NEC5 780 aa15.79■□□□□ 0.12
SNX17-204ENST00000453453 MIPOL1Q8TD10 442 aa15.79■□□□□ 0.12
SNX17-204ENST00000453453 PIH1D2Q8WWB5 315 aa15.79■□□□□ 0.12
SNX17-204ENST00000453453 TTC1Q99614 292 aa15.79■□□□□ 0.12
SNX17-204ENST00000453453 C12orf65Q9H3J6 166 aaKnown RBP15.79■□□□□ 0.12
SNX17-204ENST00000453453 FBRSL1Q9HCM7 1045 aaKnown RBP15.79■□□□□ 0.12
SNX17-204ENST00000453453 THEGQ9P2T0 379 aa15.79■□□□□ 0.12
SNX17-204ENST00000453453 C2orf81A6NN90 581 aa15.78■□□□□ 0.12
SNX17-204ENST00000453453 SIN3BO75182 1162 aa15.78■□□□□ 0.12
SNX17-204ENST00000453453 LEFTY1O75610 366 aa15.78■□□□□ 0.12
SNX17-204ENST00000453453 PAPSS2O95340 614 aaPredicted RBP15.78■□□□□ 0.12
SNX17-204ENST00000453453 ZCCHC18P0CG32 403 aa15.78■□□□□ 0.12
SNX17-204ENST00000453453 IL12RB1P42701 662 aa15.78■□□□□ 0.12
SNX17-204ENST00000453453 CPA2P48052 419 aa15.78■□□□□ 0.12
SNX17-204ENST00000453453 COPAP53621 1224 aa15.78■□□□□ 0.12
SNX17-204ENST00000453453 SEC13P55735 322 aa15.78■□□□□ 0.12
SNX17-204ENST00000453453 NAB1Q13506 487 aa15.78■□□□□ 0.12
SNX17-204ENST00000453453 TAF1AQ15573 450 aaPredicted RBP15.78■□□□□ 0.12
SNX17-204ENST00000453453 SLC44A4Q53GD3 710 aa15.78■□□□□ 0.12
SNX17-204ENST00000453453 ARSIQ5FYB1 569 aa15.78■□□□□ 0.12
SNX17-204ENST00000453453 TMEM196Q5HYL7 178 aa15.78■□□□□ 0.12
SNX17-204ENST00000453453 TXNDC11Q6PKC3 985 aa15.78■□□□□ 0.12
SNX17-204ENST00000453453 CES3Q6UWW8 571 aa15.78■□□□□ 0.12
SNX17-204ENST00000453453 USP45Q70EL2 814 aa15.78■□□□□ 0.12
SNX17-204ENST00000453453 GLT6D1Q7Z4J2 308 aa15.78■□□□□ 0.12
SNX17-204ENST00000453453 MARVELD2Q8N4S9 558 aa15.78■□□□□ 0.12
SNX17-204ENST00000453453 GABPB2Q8TAK5 448 aaPredicted RBP15.78■□□□□ 0.12
SNX17-204ENST00000453453 HCAR2Q8TDS4 363 aa15.78■□□□□ 0.12
SNX17-204ENST00000453453 KLHL32Q96NJ5 620 aa15.78■□□□□ 0.12
SNX17-204ENST00000453453 MTG2Q9H4K7 406 aa15.78■□□□□ 0.12
SNX17-204ENST00000453453 PRDM6Q9NQX0 595 aa15.78■□□□□ 0.12
SNX17-204ENST00000453453 CACNA2D2Q9NY47 1150 aa15.78■□□□□ 0.12
SNX17-204ENST00000453453 C6orf203Q9P0P8 240 aaPredicted RBP15.78■□□□□ 0.12
SNX17-204ENST00000453453 DUSP12Q9UNI6 340 aa15.78■□□□□ 0.12
SNX17-204ENST00000453453 STON1Q9Y6Q2 735 aa15.78■□□□□ 0.12
SNX17-204ENST00000453453 TCF20Q9UGU0 1960 aaKnown RBP15.77■□□□□ 0.12
SNX17-204ENST00000453453 FAM159BA6NKW6 160 aa15.77■□□□□ 0.12
SNX17-204ENST00000453453 PRR5-ARHGAP8B1AHC4 643 aa15.77■□□□□ 0.12
SNX17-204ENST00000453453 K7EQS6 105 aa15.77■□□□□ 0.12
SNX17-204ENST00000453453 MAN2B1O00754 1011 aa15.77■□□□□ 0.12
SNX17-204ENST00000453453 DENRO43583 198 aaKnown RBP15.77■□□□□ 0.12
SNX17-204ENST00000453453 SYNCRIPO60506 623 aaKnown RBP15.77■□□□□ 0.12
SNX17-204ENST00000453453 PIRTP0C851 137 aa15.77■□□□□ 0.12
SNX17-204ENST00000453453 XPAP23025 273 aaPredicted RBP15.77■□□□□ 0.12
SNX17-204ENST00000453453 NMBRP28336 390 aa15.77■□□□□ 0.12
SNX17-204ENST00000453453 TIE1P35590 1138 aa15.77■□□□□ 0.12
SNX17-204ENST00000453453 ARHGAP8P85298 464 aa15.77■□□□□ 0.12
SNX17-204ENST00000453453 TUBB3Q13509 450 aa15.77■□□□□ 0.12
SNX17-204ENST00000453453 ADRM1Q16186 407 aa15.77■□□□□ 0.12
SNX17-204ENST00000453453 HSP90AA5PQ58FG0 334 aa15.77■□□□□ 0.12
SNX17-204ENST00000453453 C9orf64Q5T6V5 341 aa15.77■□□□□ 0.12
SNX17-204ENST00000453453 TSTD2Q5T7W7 516 aa15.77■□□□□ 0.12
SNX17-204ENST00000453453 PDPK2PQ6A1A2 396 aa15.77■□□□□ 0.12
SNX17-204ENST00000453453 RAPH1Q70E73 1250 aa15.77■□□□□ 0.12
SNX17-204ENST00000453453 CTAGE3PQ8IX95 158 aa15.77■□□□□ 0.12
SNX17-204ENST00000453453 STK40Q8N2I9 435 aa15.77■□□□□ 0.12
SNX17-204ENST00000453453 TMIEQ8NEW7 156 aa15.77■□□□□ 0.12
SNX17-204ENST00000453453 STON2Q8WXE9 905 aa15.77■□□□□ 0.12
SNX17-204ENST00000453453 PEX13Q92968 403 aa15.77■□□□□ 0.12
SNX17-204ENST00000453453 GFM2Q969S9 779 aaKnown RBP15.77■□□□□ 0.12
SNX17-204ENST00000453453 ECHDC3Q96DC8 303 aa15.77■□□□□ 0.12
SNX17-204ENST00000453453 DGCR14Q96DF8 476 aaKnown RBP15.77■□□□□ 0.12
SNX17-204ENST00000453453 CMTM5Q96DZ9 223 aa15.77■□□□□ 0.12
SNX17-204ENST00000453453 MFSD3Q96ES6 412 aa15.77■□□□□ 0.12
SNX17-204ENST00000453453 CERS2Q96G23 380 aa15.77■□□□□ 0.12
SNX17-204ENST00000453453 PPP1R16AQ96I34 528 aa15.77■□□□□ 0.12
SNX17-204ENST00000453453 TRIM56Q9BRZ2 755 aaKnown RBP15.77■□□□□ 0.12
SNX17-204ENST00000453453 MAGEE1Q9HCI5 957 aa15.77■□□□□ 0.12
SNX17-204ENST00000453453 RIMKLBQ9ULI2 386 aa15.77■□□□□ 0.12
SNX17-204ENST00000453453 A0A0J9YYE9 177 aa15.76■□□□□ 0.11
SNX17-204ENST00000453453 CCDC78A2IDD5 438 aa15.76■□□□□ 0.11
SNX17-204ENST00000453453 C1QTNF3-AMACRE9PGA6 284 aa15.76■□□□□ 0.11
SNX17-204ENST00000453453 ALDH1A2O94788 518 aa15.76■□□□□ 0.11
SNX17-204ENST00000453453 EGFP01133 1207 aa15.76■□□□□ 0.11
SNX17-204ENST00000453453 TRBC1P01850 177 aa15.76■□□□□ 0.11
SNX17-204ENST00000453453 CTPS1P17812 591 aa15.76■□□□□ 0.11
SNX17-204ENST00000453453 VCLP18206 1134 aa15.76■□□□□ 0.11
SNX17-204ENST00000453453 GRK2P25098 689 aa15.76■□□□□ 0.11
SNX17-204ENST00000453453 MSLNQ13421 630 aaPredicted RBP15.76■□□□□ 0.11
SNX17-204ENST00000453453 STARD3Q14849 445 aa15.76■□□□□ 0.11
SNX17-204ENST00000453453 FBXO43Q4G163 708 aa15.76■□□□□ 0.11
SNX17-204ENST00000453453 ZNF805Q5CZA5 627 aa15.76■□□□□ 0.11
SNX17-204ENST00000453453 CFAP157Q5JU67 520 aa15.76■□□□□ 0.11
SNX17-204ENST00000453453 OGFRL1Q5TC84 451 aaPredicted RBP15.76■□□□□ 0.11
SNX17-204ENST00000453453 FSTL4Q6MZW2 842 aa15.76■□□□□ 0.11
SNX17-204ENST00000453453 TPRG1Q6ZUI0 275 aa15.76■□□□□ 0.11
SNX17-204ENST00000453453 SPATA24Q86W54 205 aa15.76■□□□□ 0.11
SNX17-204ENST00000453453 PPM1NQ8N819 430 aa15.76■□□□□ 0.11
SNX17-204ENST00000453453 FBXO27Q8NI29 283 aa15.76■□□□□ 0.11
SNX17-204ENST00000453453 PIWIL2Q8TC59 973 aaKnown RBP15.76■□□□□ 0.11
SNX17-204ENST00000453453 STYXQ8WUJ0 223 aa15.76■□□□□ 0.11
SNX17-204ENST00000453453 FAM3CQ92520 227 aa15.76■□□□□ 0.11
SNX17-204ENST00000453453 HIC2Q96JB3 615 aa15.76■□□□□ 0.11
SNX17-204ENST00000453453 RILPQ96NA2 401 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms