RNA–Protein interactions for RNA: ENST00000452162.5

PKP4-206, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 2,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-206ENST00000452162 CMTM5Q96DZ9 223 aa10.67□□□□□ -0.7
PKP4-206ENST00000452162 CCDC126Q96EE4 140 aa10.67□□□□□ -0.7
PKP4-206ENST00000452162 CCDC28BQ9BUN5 200 aa10.67□□□□□ -0.7
PKP4-206ENST00000452162 OSBPL1AQ9BXW6 950 aa10.67□□□□□ -0.7
PKP4-206ENST00000452162 SHCBP1LQ9BZQ2 653 aa10.67□□□□□ -0.7
PKP4-206ENST00000452162 POPDC3Q9HBV1 291 aa10.67□□□□□ -0.7
PKP4-206ENST00000452162 CACNA1IQ9P0X4 2223 aa10.67□□□□□ -0.7
PKP4-206ENST00000452162 SNAP91O60641 907 aa10.66□□□□□ -0.7
PKP4-206ENST00000452162 TBL1XO60907 577 aa10.66□□□□□ -0.7
PKP4-206ENST00000452162 IPO13O94829 963 aaKnown RBP10.66□□□□□ -0.7
PKP4-206ENST00000452162 TMCC1O94876 653 aa10.66□□□□□ -0.7
PKP4-206ENST00000452162 JUNP05412 331 aaKnown RBP10.66□□□□□ -0.7
PKP4-206ENST00000452162 PDHA1P08559 390 aa10.66□□□□□ -0.7
PKP4-206ENST00000452162 CWF19L1Q69YN2 538 aaKnown RBP10.66□□□□□ -0.7
PKP4-206ENST00000452162 TPGS1Q6ZTW0 290 aa10.66□□□□□ -0.7
PKP4-206ENST00000452162 GLT6D1Q7Z4J2 308 aa10.66□□□□□ -0.7
PKP4-206ENST00000452162 NET1Q7Z628 596 aaPredicted RBP10.66□□□□□ -0.7
PKP4-206ENST00000452162 MDGA1Q8NFP4 955 aa10.66□□□□□ -0.7
PKP4-206ENST00000452162 OTUB2Q96DC9 234 aa10.66□□□□□ -0.7
PKP4-206ENST00000452162 CLPTM1LQ96KA5 538 aa10.66□□□□□ -0.7
PKP4-206ENST00000452162 AARSD1Q9BTE6 412 aaKnown RBP10.66□□□□□ -0.7
PKP4-206ENST00000452162 THTPAQ9BU02 230 aa10.66□□□□□ -0.7
PKP4-206ENST00000452162 NUF2Q9BZD4 464 aa10.66□□□□□ -0.7
PKP4-206ENST00000452162 C8orf33Q9H7E9 229 aaPredicted RBP10.66□□□□□ -0.7
PKP4-206ENST00000452162 SPHK2Q9NRA0 654 aa10.66□□□□□ -0.7
PKP4-206ENST00000452162 LHX3Q9UBR4 397 aa10.66□□□□□ -0.7
PKP4-206ENST00000452162 OR51B4Q9Y5P0 310 aa10.66□□□□□ -0.7
PKP4-206ENST00000452162 RAI2Q9Y5P3 530 aa10.66□□□□□ -0.7
PKP4-206ENST00000452162 A0A088AWK7 358 aa10.66□□□□□ -0.7
PKP4-206ENST00000452162 KANSL1LA0AUZ9 987 aa10.66□□□□□ -0.7
PKP4-206ENST00000452162 TMEM233B4DJY2 109 aa10.66□□□□□ -0.7
PKP4-206ENST00000452162 H0Y3Z8 333 aa10.66□□□□□ -0.7
PKP4-206ENST00000452162 NEMP1O14524 444 aa10.66□□□□□ -0.7
PKP4-206ENST00000452162 PI15O43692 258 aa10.66□□□□□ -0.7
PKP4-206ENST00000452162 KRT36O76013 467 aa10.66□□□□□ -0.7
PKP4-206ENST00000452162 PRSS56P0CW18 603 aa10.66□□□□□ -0.7
PKP4-206ENST00000452162 COX4I1P13073 169 aa10.66□□□□□ -0.7
PKP4-206ENST00000452162 MZF1P28698 734 aaPredicted RBP10.66□□□□□ -0.7
PKP4-206ENST00000452162 EPHA3P29320 983 aa10.66□□□□□ -0.7
PKP4-206ENST00000452162 SLC25A3Q00325 362 aa10.66□□□□□ -0.7
PKP4-206ENST00000452162 TRAF2Q12933 501 aa10.66□□□□□ -0.7
PKP4-206ENST00000452162 TMEM31Q5JXX7 168 aa10.66□□□□□ -0.7
PKP4-206ENST00000452162 AFTPHQ6ULP2 937 aa10.66□□□□□ -0.7
PKP4-206ENST00000452162 LINGO4Q6UY18 593 aa10.66□□□□□ -0.7
PKP4-206ENST00000452162 ACAD11Q709F0 780 aa10.66□□□□□ -0.7
PKP4-206ENST00000452162 SDCCAG8Q86SQ7 713 aaPredicted RBP10.66□□□□□ -0.7
PKP4-206ENST00000452162 ISCA2Q86U28 154 aa10.66□□□□□ -0.7
PKP4-206ENST00000452162 RALGPS2Q86X27 583 aaPredicted RBP10.66□□□□□ -0.7
PKP4-206ENST00000452162 FAM217AQ8IXS0 508 aa10.66□□□□□ -0.7
PKP4-206ENST00000452162 CPSF7Q8N684 471 aaKnown RBP10.66□□□□□ -0.7
PKP4-206ENST00000452162 HJURPQ8NCD3 748 aaPredicted RBP10.66□□□□□ -0.7
PKP4-206ENST00000452162 OR4K2Q8NGD2 314 aa10.66□□□□□ -0.7
PKP4-206ENST00000452162 FAM3CQ92520 227 aa10.66□□□□□ -0.7
PKP4-206ENST00000452162 BHMTQ93088 406 aa10.66□□□□□ -0.7
PKP4-206ENST00000452162 PTERQ96BW5 349 aa10.66□□□□□ -0.7
PKP4-206ENST00000452162 RMDN1Q96DB5 314 aa10.66□□□□□ -0.7
PKP4-206ENST00000452162 SHDQ96IW2 340 aa10.66□□□□□ -0.7
PKP4-206ENST00000452162 SMIM14Q96QK8 99 aa10.66□□□□□ -0.7
PKP4-206ENST00000452162 FBRSL1Q9HCM7 1045 aaKnown RBP10.66□□□□□ -0.7
PKP4-206ENST00000452162 CYP4F12Q9HCS2 524 aa10.66□□□□□ -0.7
PKP4-206ENST00000452162 INTS10Q9NVR2 710 aaKnown RBP10.66□□□□□ -0.7
PKP4-206ENST00000452162 SLC7A8Q9UHI5 535 aa10.66□□□□□ -0.7
PKP4-206ENST00000452162 MCM8Q9UJA3 840 aa10.66□□□□□ -0.7
PKP4-206ENST00000452162 NDRG2Q9UN36 371 aaKnown RBP10.66□□□□□ -0.7
PKP4-206ENST00000452162 CDYLQ9Y232 598 aa10.66□□□□□ -0.7
PKP4-206ENST00000452162 ZNF510Q9Y2H8 683 aa10.66□□□□□ -0.7
PKP4-206ENST00000452162 PCDHGC4Q9Y5F7 938 aa10.66□□□□□ -0.7
PKP4-206ENST00000452162 KIAA1549LQ6ZVL6 1849 aa10.65□□□□□ -0.7
PKP4-206ENST00000452162 F8W8V4 182 aa10.65□□□□□ -0.7
PKP4-206ENST00000452162 LUC7L3O95232 432 aaKnown RBP10.65□□□□□ -0.7
PKP4-206ENST00000452162 PSMG1O95456 288 aa10.65□□□□□ -0.7
PKP4-206ENST00000452162 PENKP01210 267 aaPredicted RBP10.65□□□□□ -0.7
PKP4-206ENST00000452162 SLC4A1P02730 911 aa10.65□□□□□ -0.7
PKP4-206ENST00000452162 GLULP15104 373 aa10.65□□□□□ -0.7
PKP4-206ENST00000452162 CD1DP15813 335 aa10.65□□□□□ -0.7
PKP4-206ENST00000452162 KCNC1P48547 511 aa10.65□□□□□ -0.7
PKP4-206ENST00000452162 GTF2A1P52655 376 aaPredicted RBP10.65□□□□□ -0.7
PKP4-206ENST00000452162 NFKB2Q00653 900 aa10.65□□□□□ -0.7
PKP4-206ENST00000452162 SULT2A1Q06520 285 aa10.65□□□□□ -0.7
PKP4-206ENST00000452162 UBXN2BQ14CS0 331 aa10.65□□□□□ -0.7
PKP4-206ENST00000452162 PON2Q15165 354 aa10.65□□□□□ -0.7
PKP4-206ENST00000452162 SH2D4BQ5SQS7 431 aa10.65□□□□□ -0.7
PKP4-206ENST00000452162 TLDC1Q6P9B6 456 aa10.65□□□□□ -0.7
PKP4-206ENST00000452162 NCEH1Q6PIU2 408 aa10.65□□□□□ -0.7
PKP4-206ENST00000452162 ZNF852Q6ZMS4 543 aa10.65□□□□□ -0.7
PKP4-206ENST00000452162 FRMD7Q6ZUT3 714 aa10.65□□□□□ -0.7
PKP4-206ENST00000452162 BMP8AQ7Z5Y6 402 aa10.65□□□□□ -0.7
PKP4-206ENST00000452162 C12orf40Q86WS4 652 aa10.65□□□□□ -0.7
PKP4-206ENST00000452162 SLC22A9Q8IVM8 553 aa10.65□□□□□ -0.7
PKP4-206ENST00000452162 CARNMT1Q8N4J0 409 aa10.65□□□□□ -0.7
PKP4-206ENST00000452162 LPCAT1Q8NF37 534 aa10.65□□□□□ -0.7
PKP4-206ENST00000452162 KCNV2Q8TDN2 545 aa10.65□□□□□ -0.7
PKP4-206ENST00000452162 LPGAT1Q92604 370 aa10.65□□□□□ -0.7
PKP4-206ENST00000452162 ALG14Q96F25 216 aa10.65□□□□□ -0.7
PKP4-206ENST00000452162 MAELQ96JY0 434 aaKnown RBP10.65□□□□□ -0.7
PKP4-206ENST00000452162 PPP1R36Q96LQ0 422 aa10.65□□□□□ -0.7
PKP4-206ENST00000452162 PANX3Q96QZ0 392 aa10.65□□□□□ -0.7
PKP4-206ENST00000452162 FEM1AQ9BSK4 669 aa10.65□□□□□ -0.7
PKP4-206ENST00000452162 LRFN3Q9BTN0 628 aa10.65□□□□□ -0.7
PKP4-206ENST00000452162 ALG9Q9H6U8 611 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms